Seriola dumerili (greater amberjack): 111222192
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Entry
111222192 CDS
T05606
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111222192
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111222192
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
InlK_D3
Motif
Other DBs
NCBI-GeneID:
111222192
NCBI-ProteinID:
XP_022601530
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MDTRGAERRLFVKWHAVCCFALFTCFLDAVWGQIRYSIPEELEHGAFVGNIAEDLGLDLD
KLSARRFRIVSGAKKQYVEVNLENGVLFVNERIDREELCEQSLSCSFHLQVVIENPLELY
RVEMEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQNPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRQLFSVDS
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPEVILTSVST
PVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHQIPFQLHSSFKNYYTLVTSDFLDRET
VGEYNITLTARDMGSPPLFTRKTILVQVSDVNDNAPHFKQPSYTVYLTENNAPGASICSV
AALDPDSGQNAYLSYSILDGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLKNFQVTVQA
QDAGFPPLKNNVSVNIFILDQNDNAPVIVSPLPHNDTAPSEAVPRSVDPGYLVTRISAVD
ADAGQNSRLFYQMLQATDPSLFSVALYTGEIRTIRQLMEKDPTRHRLVILVKDNGQPPLS
ATVSIILSVVDSLPDSQPDLGDLSLSPHHSSNLTLYLIVSLGAISFTFLVAIIVLVAVRR
LKVRASNRESDFPSISGRSCCCCSRSETPTTTEVFKKSNLNVRMSTGASGCAETNSTGAL
PQVYCYKMCLTPESSKSDFMFLKPCSPVLSVQQNNAKSTDYLTSGWSALDRNELSNNRAA
TPNELKYSNKDWTWTKNQRNSAYKRYSSANMEGTLSRQQHYDADGFSCSVAPQYWTWGNH
MNGCKLSLQEGTAPNYSWTPKYTQPHSEPPDYQHNVYIPGTTSGYSTLKLAPRGELDVYN
TFSTFGKKKRFISNYEQPFDKDDALISNAIFK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgaggagcggagagaagactgtttgtgaaatggcatgcagtgtgctgtttc
gcgttgttcacttgtttcttggatgcagtctggggacagattcgctactcaatcccagag
gaactggagcatggagcttttgttggcaacatcgcagaggacttgggcttggatttggac
aaactctccgcgcgcagattccgaatagtctcaggtgccaagaagcagtacgtggaggtg
aatttggaaaatggagttttatttgtcaatgaaagaattgaccgtgaagaactgtgcgag
cagagtttgtcctgttccttccacttgcaggtggtcatagaaaaccctctggagctgtac
agggtagaaatggagattctggacgtgaatgacaattctcctagtttcccgtggaccgaa
tttaatctggacatatcggagtctgccgcgccagggtcccgtttcccacttgagagcgca
caggacttggacgtcggatccaactcgctgcgcacctatttgctgagtgtgaacgagcat
ttccttctggacatacagacgcgcagtgatggcagtaaatttgcagaactggtcctacaa
aacccgctggacagagagcagcaaagtgcgcatcagatggtcctcacagcggtggatgga
ggcgcgccggagagatccggcaccgcgcaaattgatatcaccgttttggacgcaaatgat
aacgcgccggtgtttgatcagtcgttttacagagtgagactggctgagaacgcacccaaa
ggaaccgtagttataaaactcaacgcgtccgatttagacgagggtcccaatgctgatatc
acatattctttcagtggccacgctcccatcaaagtgcgccagcttttcagcgtggactca
cgcacgggggaaatcaaagtcaaaggagtgatcgattatgaaaaggccaggatgcatgaa
atttatgttcaggctaaagataaagggccttccgctgtggcagttcactgcaaagtgctg
gtgaacgtgttggataaaaatgacaaccttccagaggtgatcctgacgtcagtgtccaca
cctgtgcaggaggacgcgcccccaggaacggtgatagccgtcatcagcgtgatggacaaa
gactcaggtgaaaacgggaacgtggactgtgagattccacatcagatcccgtttcagctc
cattcctcctttaagaactactatactttagtgacctctgattttctggacagagagaca
gtgggagagtacaacatcaccctgaccgcccgagacatgggctccccccctttattcact
cggaaaactattttagtccaagtgtctgatgtgaacgataacgcgccccacttcaagcag
ccctcctacactgtgtatctgactgagaacaacgcgccgggggcgtccatctgctcggtg
gccgcgctggatccagactccgggcagaacgcgtatctctcctattctatactggacggt
gacatacaggggatgccggtgtccacatacgtgtccataaactcagacaacggaaacatt
tacgcactgcgatcctttgaccacgagcaacttaaaaactttcaggtgacagttcaagct
caagacgccggattcccgcctctgaagaacaacgtgtcggtaaacatctttattttggat
caaaacgacaacgcgcctgtaatcgtgtcaccacttccgcacaacgacacggcacccagc
gaagcggtgcccagatccgttgaccccggttacctcgtcaccagaatcagcgctgtggac
gcggacgcgggtcagaactcgcgtctcttctatcagatgctccaagcgacagacccgagc
ttgttcagcgtcgctctgtacacgggcgaaatcaggacgattcgccagctgatggagaaa
gatcccacgaggcacagactggtcattctggtgaaggacaatggtcagccgcccctctcg
gccacagtttccatcattctgtcagtagttgacagcctgccagattcacagcccgatttg
ggtgacctgtcactaagcccccatcacagctccaacctcaccctctacttaatcgtgtct
ctgggcgcaatctccttcacatttctggtggctattattgtcctggttgcagtgcggaga
ctgaaggtcagagcgtccaacagagagtcagacttcccctccatcagcgggaggagctgc
tgctgctgctctcgctcggaaacacccaccaccacagaggtgttcaaaaagtccaatttg
aatgtgcggatgtccacgggcgcgtccggctgcgcggagacaaacagcaccggcgcgctc
ccgcaggtctattgctacaaaatgtgtctcacaccggaatcgtccaaaagtgacttcatg
ttcctcaagccgtgcagtccggttctgtcagtccaacagaacaacgccaagagcacagac
tacctgacctcaggctggagcgcactggaccggaatgagctgtccaacaacagagcagcg
accccgaacgagctgaagtattcaaacaaggactggacatggaccaagaaccaacgcaac
tcagcatacaagaggtatagttcagcaaatatggagggcactctttcccgtcaacaacat
tatgatgcagatgggttttcctgctccgtggcgccacaatactggacctggggaaaccat
atgaatggctgcaaactgtctcttcaagagggaacggctcctaactactcatggactccg
aagtacacccagcctcattctgaaccaccagactaccagcacaatgtttacatccctggc
accacatccggctacagcaccctgaagctggcacccagaggagagctggatgtgtacaac
accttctctacatttgggaagaaaaagagattcatctcaaactatgaacaacctttcgat
aaagatgatgctctcataagcaacgctatctttaaatga
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