Seriola dumerili (greater amberjack): 111222255
Help
Entry
111222255 CDS
T05606
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04142
Lysosome
sdu04144
Endocytosis
sdu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111222255 (cltc)
04142 Lysosome
111222255 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111222255 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111222255 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdu04147
]
111222255 (cltc)
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
111222255 (cltc)
Exosome [BR:
sdu04147
]
Exosomal proteins
Proteins found in most exosomes
111222255 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
111222255
NCBI-ProteinID:
XP_022601637
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
AEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
SKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFLQ
ENKRECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESL
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQPYGYGYQAPAGYGQPAAQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacttagggatc
aatccggccaacattggcttcagcaccctcaccatggagtcggacaagttcatctgtgtc
cgggagaaggtgggcgagcagactcaggtggtgatcattgacatggccgaccccaataca
cctatccgcaggcccatctctgctgacagcgccataatgaatcccgccagcaaggtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacattgaaatgaagagcaagatg
aaggcacacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacaatgctgtctaccactggagcatggagggtgactcacagcctgtg
aaagtctttgaccggcactccagcctggcaggctgccagatcatcaactaccgcactgac
gccaagcagaaatggctcctgctcatcggtatctcagcccagcaaaatcgggtggtggga
gccatgcagctctactctgtcgacagaaaagtgtctcagcccatcgaaggccacgctgcc
agctttgcccagttcaagatggagggaaatacagaggagtctactttgttctgcttcgct
gttagaggccaagctggaggaaagttgcacatcatcgaagtcgggaccccaccaactggc
aaccagccatttccaaagaaagcagtggatgtgttcttccctccagaagcccagaatgac
ttccctgtggccatgcagataagctccaagcaagatgtggttttccttattactaaatac
ggctacatccacttgtatgatctggagacaggcacctgcatctacatgaaccgcatcagc
ggagagaccatctttgtcaccgctccacatgaggccacctctggcatcattggagtcaac
aggaagggacaggtgctgtccgtgtgcgtggaagaggaaaacatcatcccctatatcacc
aacgtactgcagaatccagatctcgctctccgcttggctgtccgcaacaacctcgctggt
gctgaagagctcttcgcacgcaagttcaacaacctgtttgctgctggcaactactcagag
gccgcaaaagtggctgccaatgcaccaaagggtatcctacgtaccccagacaccatccgt
cgctttcagagcgttccgactcagcctggccagacctcccccttgctgcagtactttggt
attctgttggaccagggccaactcaacaagtttgagtccctggagctttgcaggcccgtc
ctccaacagggacgaaagcagcttctggagaagtggctgaaggaagacaagttggagtgt
tcagaggaacttggtgacttggtgaaggcagtggatcccaccttggctctcagtgtttac
ctcagggccaacgtccccaacaaggtcattcagtgctttgcagagactggtcagttcccc
aagattgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctgagg
aatgtgatgcgaatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggat
gaagagccacttgctgacatcacacagatcgtggatgtattcatggagtacaacctgatc
cagcagtgcacctcattcctcttggacgctttgaagaacaacagaccctcagaaggacca
ctgcagactcgcctgctggagatgaacctcatgcatgctccacaggttgccgatgctatc
ctgggcaaccagatgttcaccaattacgatcgcgcccacatcgcccagctgtgtgagaag
gctggactcctgcaaagagcactggagcactacacagacctgtacgacatcaagcgcgct
gttgttcatacacacctgctcaacccagagtggctggtgaacttctttggctccctgtca
gtggaagactctctggagtgcctcagggccatgttgtcagccaacatccgccagaacctg
cagatctgtgtccaggtggcttccaagtaccatgagcagctcaccacacaggctctcact
gagctctttgagtccttcaagagctttgaaggtctgttctacttcttgggttctattgtg
aacttcagtcaggaccctgaggttcacttcaaatacatccaggccgcctgcaagacgggc
cagatcaaagaggtggagaggatctgtagagagagcaactgctacgaccctgagcgcgtc
aagaacttcctcaaggaagccaaactcaccgaccagctgccactcatcatcgtctgtgac
cgatttgactttgtccatgacctggtcctctacctgtaccgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaatcctagccgtctgcctgttgttgtcggcggtctc
ttagacgtggactgctcagaggatgtcatcaagagcctgatcttggttgtcaggggacag
ttctccactgatgaactggtcgctgaggtggaaaagaggaacagactgaagctgctgctt
ccttggctggagtctcgcatccatgagggctgcgaggagcccgccacacataatgccctg
gccaagatctacatcgacagcaacaataaccctgaacgcttcctgcgggagaacccgtac
tatgacagccgcgtggtgggaaagtactgcgagaagagagaccctcacctggcctgtgtg
gcctacgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactctctc
ttcaagagcctgtctcgctacctggtccgtcgcaaagaccctgagctgtgggcgagcgtg
ctgctggagagcaacccctacaggcgaccactgattgaccaggtggtacagacagcactg
tcagaaacccaggatccagaggaggtatcggtcacagtcaaggccttcatgaccgcagat
ttgcccaacgagctcatcgagctgctggagaagattgtattggacaactctgtcttcagt
gaacacagaaatctgcagaatctgttgatcctgacagcgatcaaagctgaccgtacacgt
gtgatggagtacatcagcaggctagacaactatgacgctcctgatatcgctaacatcgcc
atcagcaatgagctattcgaggaggcctttgccatcttcaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgagcatattggcaacctggaccgggcctatgagtttgca
gagcgctgcaatgagccagctgtgtggagccagctggctaaggctcagctacagaagggc
ctggttaaggaggccattgattcctacatcaaagctgatgacccctctgcatacatggag
gttgtacaggctgctgataagagcggtaactgggaggatttggtcaaatttcttcagatg
gctcgtaagaaggctcgtgaatcctacgtagaaacagagctcatctttgctttggccaaa
accaatcgcctggcagaactagaagagttcattaatggacccaacaatgctcacatccag
caggtcggtgaccgctgttatgatgagaaaatgtatgaggcagctaagctgctatacaac
aatgtctccaactttggtcgtctggcttcaactctggtgcacctcggggagtaccaggct
gctgtggacggcgcccgtaaagccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaggagttcagactggcccagatgtgtggtctccacattgtggtgcac
gctgatgagctggaggagctgatcaactactaccaagaccgtggttactttgaggagctg
atcaccatgctggaggccgccctgggcctggagcgcgctcacatggggatgttcacagag
ctggccatcctttactccaagttcaagccccagaagatgagggagcatctggagctcttc
tggtccagagttaacatcccaaaggtcctgagagcagcagagcaggctcacctgtgggcc
gagctggtcttcctgtacgacaagtacgaggagtttgacaacgccatcatcaccatgatg
aaccacccaacagacgcctggaaagaaggacagttcaaagacatcatcaccaaggtggcc
aacgtggagctgtactacaaagccacccagttctatctggagtttaagcccttgttactg
aatgatttgctcatagtgctttcccccagactggaccactcccgcgctgtcaacttcttc
agcaaggttaaacagctgcctctggtcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgaggacatcaatagacgcctacgacaacttcgacaacatctcgctggcccagcgcttg
gagaagcacgagctgattgagttcaggagaatcgctgcctacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggataagctctataaggatgccatgcag
tatgcgtcagagtccaaggacacagagctggcggaggagctgctgtcctggttcttacag
gagaacaagagggagtgtttcgccgcctgcctgttcacctgctatgacctgctgcggcct
gacgtggtgctggagacagcctggaggcacaacatcatggacttttctatgccatacttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctcagagtcccta
aggaaagaggaggagcaggcaacagagacgcaacctattgtctacggcacaccccagctg
atgctgacagcaggccccagtgtacctgtggctcctcagcagccttacggctacggctac
caggcacctgcaggatatggtcagccagcagctcagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
