Seriola dumerili (greater amberjack): 111222316
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Entry
111222316 CDS
T05606
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111222316 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111222316 (myo5a)
04131 Membrane trafficking [BR:
sdu04131
]
111222316 (myo5a)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111222316 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111222316 (myo5a)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111222316 (myo5a)
mRNA cycle factors
P-body specific factors
111222316 (myo5a)
Membrane trafficking [BR:
sdu04131
]
Others
Actin-binding proteins
Myosins
111222316 (myo5a)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111222316 (myo5a)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111222316 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
DUF4407
Myosin_N
nSTAND3
DUF5382
HTH_17
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
111222316
NCBI-ProteinID:
XP_022601732
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MAASELYTKCARVWIPDAEEVWKSAELTKDYKNGDASLQLMLEDGTNIEHKLDPKTKNLP
YLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPIYG
SDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKNLKLSSANNFLYTRQGRSPVIDGVD
DTKELCTTRNAFTLLGINESYQMGLFQVLAAILHLGNVEIKDRDSDSSLIPPNNRHLMAF
CELVGVTYQDMSQWLCHRKLKTATETYIKPLPRLQATNARDALSKHIYAKLFNWIVEHVN
KALITNVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLFEK
PRMSNRAFIIQHFADKVEYQCEGFLEKNKDTVNEEQINVLKASKFDLLVELFHDEEKATT
PTGQVPGTGGRTRLSIKPDKSREKSSKDHKKTVGCQFRNSLQMLMDTLNATTPHYVRCIK
PNDFKMAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLPD
KKLTCKNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWLA
RKKYLRKRSAAITIQRFTRGYQARCLAKFLRRTQAATIIQKYQRMYVEKKRYRQKQAAAL
AMQTILRAYMARQKYQALLREHKAVIIQKRVRGWLARCWYKRCLVSIVYLQCCIRRMKAR
RELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQSKENRSINERLVGLENTYSAESE
RMRSELSRLRGVEEEAKNKTNQVTSLLEELERLRKELSATQQEKKTIEDWAQKYRDEMEK
MVSELKDQNGLLKKEKDDLNRLIQEQSQQMTEKMARVIAEETQQLETDLNEERSRYQNLL
TEHLRLEEKYDDLKEEMALSSNVSKPGHRRTDSTHSSNESEYTYNSEYAELEEGSRTTED
VTRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEEQFQRARARDDAEFKKARGAELEYE
SLKRQELESENKKLRHDLAEMRQSLLGDAATGAGAPGSPAYKVLLDQLNASCEELEVRKE
EVLILRSQLVSQKEAMHHKDEKETMTEPSVYVEDVSKLKDADELKQAYIGLKDTNRLLEH
QLQTQRRSYDSEVEALRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNE
NLELMAEDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQTE
GQTSPGQMVDEPIHPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIPGL
PAYILFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLANTCRFLHCL
KQYSGDEAFMKHNTSRQNEHSLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIVSG
MLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIKQV
VKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMTCGAKETLEPLI
QAAQLLQVKKKTDEDAEAICSMCQALTTAQIVKVLNLYTPVNEFEERVSVAFIRTIQTRL
RDRCESPQLLMDTKMIYPVTFPFNPSSLALETIQIPGSLNLGFLTRV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcggagctgtacacaaagtgtgctcgggtgtggattccagatgcagaggag
gtgtggaagtctgctgagctcaccaaggactacaaaaatggcgacgcctccctgcagctc
atgctggaggatggaacgaacattgagcacaagctggaccccaagacgaagaacctgcct
tacctgcgaaacccagacatcctggttggcgagaatgacctcacagcgctcagctacctc
cacgagccggccgtgctgcacaacctgaaagtccgctttatcgactctaagctcatctac
acttactgtggaatcgttctggtggccatcaacccatacgagacgctgccaatctacggg
tcagacatcatcaatgcctacagcggtcagaacatgggagacatggacccacatattttt
gctgtggcagaggaggcttacaaacagatggccagggacgagaggaaccagtcgatcatt
gtgagcggggagtccggagcaggaaagacggtatcagccaaatacgccatgagatacttt
gctacggtcagcggctccgccagtgaggccaacgtggaggagaaagtcttggcttccaac
cccatcatggaggctattggaaatgcaaaaaccaccagaaatgacaacagcagtcgtttc
ggcaaatacattgagatcggcttcgacaaccgctaccgcatcattggtgccaacatgaga
acatatctgctggaaaaatcacgagtggtctttcaggcggatgaggagaggaattatcat
atcttctatcagctctgtgcatcatcccatctgcctgagttcaagaatctgaagctgagc
agtgcaaacaacttcctgtacacgaggcagggccgcagccccgttatcgacggtgtggac
gacaccaaggagctctgcaccactcgcaatgccttcacattgctcggcattaatgagtcc
tatcagatggggttgttccaggttttggctgctattcttcatctgggaaacgtggaaata
aaggacagagattcagacagcagcctcattcctcccaacaatcggcacctgatggcgttc
tgcgagctagtaggcgtgacctaccaggacatgtctcagtggctgtgccataggaagctg
aagacggccacagagacgtatatcaaacccctccctcgtctgcaggccaccaacgcccgt
gacgcactgtccaaacatatctacgccaagctcttcaactggatagtagagcacgtcaac
aaggctctgatcaccaatgtcaaacagcactctttcatcggggtcctcgacatctatggg
tttgagacatttgagatcaacagctttgaacagttctgtatcaactacgctaatgagaaa
ctccagcagcaattcaacatgcatgtgttcaagctggagcaggaagagtacatgaaggag
cagatcccctggactctgattgacttctacgacaatcagccctgcatcaacctcatagaa
gccaagatgggaatcctggacctgttggacgaggagtgcaaaatgcccaaaggttcagat
gattcttgggctcagaaactgtacaacacccatctgaagacctgctccctctttgagaag
ccacgcatgtccaaccgcgccttcatcatccaacattttgctgacaaggtcgagtatcag
tgtgaaggtttcctggagaagaacaaggacactgtgaatgaagaacagatcaatgtgctg
aaggccagcaagtttgacctgctagtggagctgttccacgatgaggagaaagccaccact
cccactggtcaggtcccagggactgggggccggacccgcctcagcatcaaacctgacaag
agccgagaaaaaagcagcaaggaccacaagaagacagtcggctgccagtttcgtaactct
ctgcaaatgctgatggacactttgaatgcaaccactccacattacgtccgctgcatcaaa
cccaatgactttaagatggccttctcgtttgatcctaaacgtgcagtgcagcagctcaga
gcctgtggtgtcctggagaccatccgcatctctgctgcaggtttcccatccagatggacg
taccaggagttcttcagtcgttacagagtgctgatgaagcagaaggacgtgcttcctgac
aaaaagttgacctgcaaaaacgttctggagaaactggtgcaggaccaagataaataccag
tttggtaagaccaagatcttcttcagggccggtcaggttgcctatctggagaagttaagg
gcagacaagttgcgtgctgcatgtatccgcatccagaaaaccatccgctgctggctggca
cggaagaagtatctgcgaaagcgcagcgctgccatcaccatccagaggttcaccagagga
taccaggctcgctgcctggccaagttcctgcgtcgcactcaggccgccaccatcatccag
aagtaccagaggatgtacgtggagaagaaacgctacaggcagaagcaggctgctgcactg
gccatgcagacgatcctcagagcttatatggcccggcagaagtaccaggcgctgctgcgg
gagcacaaggcggtgatcattcagaaacgcgttcgtggctggttggctcggtgctggtac
aagcgctgcctcgtctccatcgtctacctgcagtgctgtatccgcaggatgaaggcgagg
cgcgagttgaagaagctgaagatcgaggctcgctcagtggagcacttcaagaagctcaac
aaaggcatggagaacaagatcatgcaactgcagaggaagatcgacgagcagagcaaggaa
aaccggtcaatcaacgagaggctcgttggcctggagaatacctactcagcagagagcgaa
cgaatgcgcagcgagctgagccgactgcgtggggtggaggaggaggccaagaacaaaacc
aaccaggtgacgtcgttgctggaggaactggagcggctgaggaaggagctgagtgccacg
cagcaggagaagaagaccatcgaggactgggcgcagaaatacagggacgaaatggagaaa
atggtctcggagctgaaggaccagaatggcttgctgaagaaagagaaggacgacttgaac
aggttgattcaggaacagagtcagcagatgacagagaaaatggcgcgggtgatagcagag
gaaactcagcagctggagacagatctgaacgaggagcggtctcgctaccagaatctcctg
acagaacaccttcgcctcgaggagaaatacgacgacctgaaggaggagatggctctttcc
tcgaatgtctccaagcctggtcacaggagaacagattccactcacagcagcaacgagtca
gagtacacctacaactcagagtacgccgaattggaagaaggttcccgtaccaccgaagat
gtgacacgaggaatcgacacctctctgaccctcaagctgcagaaacgtctcacagaactg
gagcaagaaaagcagtcactgcgcaacgaactggaaaacaaagaggagcagttccagcgg
gctagagccagggatgatgcagagtttaaaaaggctcgtggggcagagctggagtatgag
tcgctcaagcgtcaggagctggagtcagagaacaagaagcttagacatgacttggcagag
atgaggcaaagcctgctgggtgacgcagctacaggcgccggtgccccaggctcccctgct
tacaaggtgctgctggatcagctcaatgcctcctgtgaggagctggaggttcgcaaggag
gaggtgctgatcctgcgctcccagctggtgagccagaaggaagccatgcaccacaaggat
gagaaggagaccatgacagagccgtctgtctatgttgaggatgtgtctaaactgaaggat
gctgacgaactcaaacaagcttacataggcctcaaagacaccaacaggttactggagcac
cagcttcagactcagcgtagaagttacgacagtgaggtggaggcgttgcgcggcgagctg
cagaatgtcaaggaggagaacaatcgtcagcagcagctcttggcccaaaacctccaacta
cctccagaggcccgaatcgaagccagtctgcaacacgagatcacccggctcacgaacgag
aacctggaactcatggccgaggaccccacagcatccagagaagctcgagtcatcatttta
cgacggatggttgatctcatggagcagctggagaagcaggaccgaaccatccgcaagctc
aagaagcagctgaaggtttactccaagaggattggggagatgggagcgggtcaaaccgag
ggccagacgtctccaggacagatggtggacgagccgatccaccccgtcaacattccccgc
agggagaaagacttccagggaatgctggagtacaagaaggaggatgagcttaaactggtc
aagaacctcatcctggaactgaagcctcgcggtgtagccgtgaatctgatcccaggcctg
ccagcctacatcctattcatgtgtctgagacatgccgactatgtcaacgatgaccagaag
gtccgcactctgctcacctcaaccatcaacagtattaagaagatactaaagaaacgagga
gatgactttgaaacagtgtctttctggttggccaacacctgccgcttcttgcactgtctg
aaacagtacagcggagatgaggctttcatgaagcacaacacatcgaggcaaaacgaacac
tctctgtccaacttcgacctggcagagtacagacaggtgatcagtgacctggccatccag
atctatcagcagctgatcaaatgcatggagaacatcctccagcccatgatagtctctggc
atgctggaacacgagaccatccagggcgtttctggggtgaagcccacaggtctccgtaag
cgcacgtccagtatcgctgacgagggaacctacaccctggactccatcctgcggcagctc
agcgccttccactccaccatgtgtcagcacggcaccgaccccgagctcatcaagcaggtg
gtgaagcagcagttctacatcatcggagctgtcaccctcaacaacctgctgctgcgcaag
gacatgtgctcctggagcaaaggcatgcagatcaggtacaatgtgagccagctggaggag
tggctcagagacaaaggtctcatgacatgcggagccaaggagaccctggagcctctgatc
caggccgctcagctgctgcaggtgaagaagaagactgacgaggacgctgaggccatctgc
tccatgtgccaggccctcaccactgctcagattgtgaaggtcctgaacctctacacacca
gtcaacgagtttgaggagagagtgtcagttgcattcatacgaaccatacagactcgcttg
cgagaccgttgtgagagtccccagttgttgatggacacaaagatgatatatccagtcacc
ttcccgttcaacccctcctccctcgccctggaaaccatccagatccccggctcgctcaac
ctggggttcctcacccgtgtctaa
DBGET
integrated database retrieval system
