Seriola dumerili (greater amberjack): 111222324
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Entry
111222324 CDS
T05606
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111222324
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111222324
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111222324
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111222324
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111222324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
He_PIG
RET_CLD1
Syndecan
Motif
Other DBs
NCBI-GeneID:
111222324
NCBI-ProteinID:
XP_022601745
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MELNLLVVLFWVLVLRCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLAKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPEAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
SPKFEKSTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST
GIIYVKGSLDREEISSLSFYVMAKDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGEKVLDVTASDADSGTNAELLYNIVADSSIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDVDKGENARVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRS
SYVGVTINVLDENDNDPVVTKPSNSSFRHLSPLASPDSHVEIVEAEDLDSGPNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQPKYNNKQHPHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGGEEHR
SRLPPSRSAYSSSGHDASQDCPLEEMPLSVASEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaacttacttgtagtgctgttttgggtcctggtgctgcgctgtggctctgct
gaaggcagtatcctgtaccgggtccaggaggagcagccccccaacactctgattggtagc
ctggcagcagaccagggactgccagactcgggtcacctctacaagctggaggtgggtgcc
ccttacctccgtgtcgatggaaagacgggagacattttcacaacggagattcccatagac
agagagaccctgagggactgtcgatccctggctaagggtaagccctgctacctggagttt
gaagtgtcagtgacagatctgatacaaaatcagagcccacgtcttatcgaaggacgcatt
gaggtgcaggacatcaatgacaacaccccacagtttccctcttctgtgctcaccatctct
gtcccagagaacacgatcatgggggcgctattctccatacctttagctacagacagggac
tcggacaggaatggagttgctgactatgcgctgaccgcaggcccagaagcagcaaccctg
tttggtttacaagtggctgatgacaggggtgggaaactcccacagctgattgtcctgggc
aacctagatcgtgagttaaaggattcctatgaccttaccatcaaggcagtggatggagga
aaccctcagcgctacagcagtgctttgcttagagtcgtagtcaccgacgccaatgataac
tctcccaaatttgaaaagtccacgtacgaggccgaagtttcggaaaatagtccagtgggc
cactctgtgttgcaggtcaaagcaaatgactctgacatgggccctaatggagaaattgag
tacacccttcaccaagcagtggaccctgtgccgaaactcttacgaattgaccggtctact
ggtattatctatgtcaaaggatccctggacagggaggaaatcagcagcctgtccttctat
gtgatggcaaaagataaaggtcctcaacctaaaagctctaagacatttgtaaccattgag
gtgactgaccaaaatgacaatgctccagctgtggagattcgtgggatcggtctcgtgaca
cacagtgagggagtggctaacatttcagaggacatgccagtgggaacagccgtagctttg
gtgcaagtgtctgacaaggatgagggagagaatgctgtggtgacctgtgtggttgcagga
gatgtgcccttccagctccgccctgccagcgactcatccagtgacaacaagaggaagtat
tttctacagaccaccactcctctcgactacgaaagggttaaggagtaccgagtggagatt
gtggctgtggattctggaaatccagcactctctagtacaaattcattgaaggttcaggtg
actgatgtgaatgacaattctccgatattctccccaaccttgtttgaggtagattttgcc
gaagaaaaccaaccaggggagaaggttttggatgttacagcttcggatgcagacagtggc
actaacgcagaactcctttataacattgtggcagactcatccatcaaaggtctgtttgag
attgacccaaatacaggtgaagtaagagcccgaagccctcttgatcgtgagcataaagag
cgttatgagttccgggtcacagcggcagataaagggtcacctgttcataaaggaacagca
accgttgtagtaaaagtccttgaccgcaatgacaatgaccccaagttcatgcttagtggc
tacagcttttcagtgttggaaaacatgcctcccctcagtccagttggtatggtgacagtc
cttgatgtagacaaaggtgagaatgctcgtgttcacctctctgtcgagcctgatggaggg
aagtttgttgttcaaaatggaacgggcaccatcctctcaagcatctcatttgacagggag
aaagaaagcagctacactttccgtctgaaagcagtggatggaggagagccaccaaggtct
tcatatgtgggtgttactatcaatgtactggatgaaaatgacaatgaccctgtggtcacc
aagccctccaattcctccttcaggcatttgtcacctctggcttccccagacagccatgtg
gagatagtggaagctgaagatctggacagtgggcctaatgcagagctggtcttcagtatt
gctggtgggaacccttaccagttatttcgcatctccccttccagtggggagatcacttta
gctaaggagatgacccgaaaacacggtggactacatcgcctagtggtgcgagtgagtgat
aggggtaagcctgcacgtcatgccactgccctggtccacatctatgtcaatgaaaccatt
tcaaatgtcagcttagtggaagccctagttggacacagtctttacactccattggacaga
gacattgctggtgatcctgacaatggttttgctgcacagcgtagtaacattttgtttgga
agccttgccggtgtggcaggtgtcgtcatgttgatcttggtggtggtatttattcgacac
cgcatccagagagaaactaagagtggttatcaggccggcaaaaaggaaacaaaggactta
tacgcacccaaacaggcaccaaagaatgccaaaggcaaacgaggaaggaaaggcaaacct
cagaagtcccccaaaccactcggggaagaggaagaggtcagccttcaaaagagtctcaaa
ttcaacctcgatggagtcaatgatagccccaggatacacctgcccttaacctattcacca
ggaagccctgatataggcaggcactaccgctccaactcccccctaccctccatccagctg
caggctcaatccccttccgcctcacagaagcatcaagccgtccaggacctgcccgctgcc
aacacctttgtaggaacaggaggagacgacaactctaccggctcagaccagtactcagat
tacagctacaagaccagccaaccgaagtacaacaacaaacagcatccccatcggcgagtg
accttctccaccactaaccctgtgcaggacctgcaggatgcctctcagcacagctactat
gacagcggtttggaggaatctgagactcccagcagcaagtcatcgtctggtcctcgcatc
ggacccctgaccctgcctgaggaccactatgagagaaccactccagatggcagcattgga
gagaccgagcacccggaaaacgatatccgctccctccctgatgtggcaatgaccggaaac
tgtacgacagagtgcagcgaattgggccactcagacgcctgctggatgcccgggcatccc
tcccctgtacgcaagaccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agagggagcctgggacgcctggcaaacgggagcgtcaggctgggtggcgaggagcaccga
tcgcgccttccgccctcccgcagtgcctattccagcagcggtcacgacgccagtcaggac
tgccccttagaggagatgcccctgagcgtagcctctgagttcccacccacctccccctct
gcccacactccaaaaagagaaatttacctgtga
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