Seriola dumerili (greater amberjack): 111222381
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Entry
111222381 CDS
T05606
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03320
PPAR signaling pathway
sdu04120
Ubiquitin mediated proteolysis
sdu04137
Mitophagy - animal
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111222381 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111222381 (ubc)
04137 Mitophagy - animal
111222381 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
111222381 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111222381 (ubc)
Ubiquitin system [BR:
sdu04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111222381 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
111222381
NCBI-ProteinID:
XP_022601816
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLENGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLENGRTLSDYNIQKESTLHLVLRLRGGHLREVLIPESADMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcaccctggaggttgagcccagc
gataccattgagaatgtcaaggccaagatccaggacaaggaaggcattcctccagatcag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagaatctaccctccatcttgtcctgcgtctgaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacaccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggtcgcaccctgtctgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgagaggcggtatgcagatctttgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgagaacgtgaaggcc
aagatccaggacaaggaaggcattcccccagaccagcagaggctgatctttgccggcaag
cagctggaagatggtcgcaccctgtctgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgagaggcggtatgcagatctttgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgagaatgtcaaagcaaagatccaggac
aaggaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaaaat
ggccgcaccctgtctgactacaacatccagaaagaatctaccctccatcttgtcctgcgt
ctgaggggagggatgcagatctttgtcaagaccctcactggcaagaccatcaccctggag
gttgagcccagcgacaccattgagaatgtcaaagcaaagatccaggacaaggaaggcatt
cccccagaccagcagaggctgatctttgctggcaagcagctggaaaatggccgcaccctg
tctgactacaacatccagaaagaatctaccctccatcttgtcctgcgtctgaggggaggg
atgcagatctttgtcaagaccctcactggcaagaccatcaccctggaggttgagcccagc
gacaccattgagaatgtcaaagcaaagatccaggacaaggaaggcattcccccagaccag
cagaggctgatctttgctggcaagcagctggaaaatggccgcaccctgtctgactacaac
atccagaaagaatctaccctccatcttgtcctgcgtctgaggggcgggcatctgagggag
gtgttgataccggaaagtgcagacatgcagatcttcgtcaagaccctcactggcaagacc
atcacccttgaggttgagccaagtgacaccattgagaatgtcaaggccaagatccaggac
aaagaaggcattcccccagaccagcagaggctgatctttgccggcaagcagctggaagat
ggccgcaccctctctgactacaacatccagaaagaatctaccctccatcttgtcctgcgt
ctgagaggcggtatgcaaatcttcgtcaagaccctcactggtaagaccatcacccttgag
gttgagcccagcgacaccattgagaatgtcaaggccaagatccaggacaaggaaggcatt
cccccagaccagcagaggctgatctttgccggcaagcagctggaagatggccgcaccctc
tctgactacaacatccagaaagaatctaccctccatcttgtcctgcgtctgagaggtggt
atgcaaatcttcgtcaagaccctcactggtaagaccatcaccctggaggttgagcccagc
gacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattcccccagaccag
cagaggctgatctttgccggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaagaatctaccctccatcttgtcctgcgtctgaggggtggtcaataa
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