Seriola dumerili (greater amberjack): 111222426 Help Entry 111222426         CDS       T05606                                  Symbol smarcc1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     111222426 (smarcc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sdu03021]     111222426 (smarcc1)    03036 Chromosome and associated proteins [BR:sdu03036]     111222426 (smarcc1) Transcription machinery [BR:sdu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      111222426 (smarcc1) Chromosome and associated proteins [BR:sdu03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     111222426 (smarcc1)    PBAF complex     111222426 (smarcc1)    GBAF(ncBAF) complex     111222426 (smarcc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM SWIRM-assoc_1 Myb_DNA-binding Myb_DNA-bind_6 HEAT_GCN1 BRCT Chromo BRCT_2 Motif Other DBs NCBI-GeneID:  111222426 NCBI-ProteinID:  XP_022601872 LinkDB All DBs Position Unknown AA seq 1137 aa AA seqDB search MATAATTAGGTGSGGPATGQVGGGTAVGRKKDGGPSTKFWESSETISQLETVRLWIGKHY KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFLDFKAGGALCHILG SVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVFLSSDIEQKQASK LKDIIKRHQGSITDDKSKATHHIYPSPSQQEEEEWLRPVMRKDKQVLVHWGLYPDSYDTW VSVSEVDGDVEDPPSTDRPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKPVSFRQRIFPK EEESSRTPDRKERKANSAGKKRRRSPSPPSTPVESRKKGGKKGNPGPHWKRRGHRGEEED TEEDMTKDMDDSSAGASMEEGSMSKNASSKKDSENTPVKGGNVADLDDMEDDSVLSGGKD DEEQGKAEINRLMDASEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSK TPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDSE SRPLPMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPPQQMPNFADKGKDKAIDLQNFGLR TDLYKKTLKGKPVTSTREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL PIEDPYLENNEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR VREEVPAELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTETTEPEKMDTD TDSQQADKAELKDEAEKPSESAEKSDKTEATEKVKKEGTETSEREEETEEAGEAKTSPAD KEKEEAMETSSSEQEKDKEEKAATEEGEEKRKKLEHDIGEGNIATAAAAALASAATKAKH LAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFH MEQLKYAEMKARQQMEQQAAAAAAAAAAAAAQAQGQGQAPGSGPHSGPPQPGMHPGGPPP HHGGPTPHHGAPPPHHGGPPPGAAMHPGYPPMGHHPMAPHHPGQTGPMGPSQPIPGRMMP GPPSAGPPPGGMPPMMPPRHPGAPNGMYPGPAPAQPEAMPVAPVGPAAPPSGRVADN NT seq 3414 nt NT seq  +upstreamnt  +downstreamnt atggcgacggcggcgacaacggcaggcggaacgggctcaggcggaccggccaccggccag gtcggtggcggaaccgcagtgggacgtaaaaaggacggtggcccatccacgaaattctgg gaaagttcagagacgatatcccaactggagacggtgcggctctggattggaaagcactac aagaagtatgtccagaatgactccccctccagtaaatccttggcgggtctggttgtccag ctgctgcagttccaggaggacgcatttggacgtagggttaacaatcctgctcttaccaag cttcctgccaaatgtttcctggatttcaaggcaggaggtgctctctgtcatatcttgggg tcggtctacaagtttaagagcgagcagggctggcgtcgatttgacctacagaatccctcc cggatggacaggaacgtggaaatgttcttaaatgtagagaagaacttggtccagaataac tgcttgactcgacccactgtcttcctgtcatcggatatcgagcagaaacaggccagtaag ctcaaagacatcatcaaaaggcaccagggttccatcactgatgacaagtcaaaggccacc caccacatttacccttctccatcccaacaagaggaagaggagtggcttcgtcctgttatg aggaaagataagcaggtgctggtgcactggggtctctacccagacagctatgatacctgg gtatcagtgagcgaggtggatggtgatgtggaggatcctccgagcactgacagaccctgg aaggtccacgccaagtgggttttagacacagatgccttcaatgagtggatgaatgaagaa gactacgaggtagacgagaacaagaagcctgtcagcttccgccagaggatcttccccaag gaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggccaactccgccgggaag aagaggaggcgctcgccctcgccgcccagcactcctgtcgagtcccgcaagaagggagga aagaaggggaaccccgggcctcactggaagcgacggggccacagaggcgaagaggaggac acagaggaggacatgaccaaggatatggacgactcatcagctggtgccagcatggaggag ggaagcatgtccaagaatgcaagttcaaagaaagacagtgaaaatactccagtgaaagga gggaatgtggccgacctggatgacatggaggatgactctgtgctgtctggtggaaaggac gatgaggagcaaggcaaagctgaaatcaaccggctgatggacgctagtgaggacaacgtg accgagcagactcaccacatcatcatccccagctacgccgcctggttcgactacaactgc atccatgagatagagagaagagccttgcccgagttcttcaatggaaagaacaagtccaaa actccagagatatacctggcctaccgcaacttcatgatcgacacgtaccggctaaaccct caggagtatctcacctccacctcctgccgcaggaacctgactggggatgtctgcgccatc atgagggttcatgcgttcttggagcagtggggtctggtgaactaccaggtcgactccgag agtcgcccgctgcccatgggccccccacctacaccccacttcactgtgctggctgacaca ccttccggcctcatgcccttgaaccaccgacccccgccgattcctcctccacagcaaatg cccaactttgcagacaaaggcaaagacaaagccatcgacctgcagaactttggccttcgc accgacctctacaagaaaaccctaaagggtaaaccagtcacctccaccagggaatggacc gagcaggagactctactgctgctagaggccctggagatgtacaaagatgactggaacaaa gtgtcggagcatgtcggttcacgcacccaggacgagtgtatcctgcacttcctgcggctg cccatcgaggatccgtacctggagaacaatgaggcctctctgggccctctggcctaccag cccatacccttcagccagtctggaaaccccgtcatgagcacagtagccttcctggcctct gtggtcgaccccagggtggcgtctgctgctgccaaggcagctctagaggagttttcccgt gtgcgtgaggaggtgccggctgagctggtggaggctcatgtgaagaaggtgcaggaggcg gctcgtagcacaggaaaggtggaccctgccttcggcctggagagcagtggcatcgctggc accgcccccgaggaaccagaaaagactgaaaccacagagccagaaaagatggacactgac acagactcccagcaggccgataaggcggagttgaaggacgaggcagagaagcccagtgag tctgcagaaaagagtgacaagaccgaggcaacagaaaaggtgaagaaggagggaacggag acatcggagcgtgaggaggagacggaggaagcaggggaggcaaagacgtctccagcagac aaggagaaggaggaagcgatggagacatcatcctcagagcaggagaaggataaggaggag aaggcagctacagaggagggcgaggagaagaggaagaagctggagcatgacattggagag ggaaatatcgccacggcagccgcagctgctctggcatctgctgccaccaaagccaagcat ctggcagccgtggaggagaggaagatcaagtcgctggtcgctctgctggtggagacccag atgaagaagctggagatcaagctgaggcacttcgaggagctcgaaaccatcatggaccga gagaaagaggccttggagcttcagcggcagcagctgctcaccgagcgtcaggcgttccac atggagcagctcaaatacgccgagatgaaggcgaggcagcagatggagcagcaggctgct gccgctgccgccgccgccgccgctgcagccgcccaggcccaaggacagggacaggcccct ggatctggaccccactctgggccccctcaaccaggcatgcacccaggaggacccccaccc caccacggaggaccaaccccacaccacggagcacctcctccccaccacggagggccacca cccggtgctgccatgcaccccggctaccccccgatgggtcaccaccccatggcgcctcac cacccaggacagacaggaccgatgggacccagccagccgattcctgggcgtatgatgccc ggcccgccctctgccggcccccctcctggcggcatgcctcccatgatgcccccacgccac cccggagctcccaacggcatgtaccctggtccagcacctgcacagcctgaggccatgcct gtagctcctgtgggtcctgcagcgcccccgagtggacgagtggctgacaactaa

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