Seriola dumerili (greater amberjack): 111222535
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Entry
111222535 CDS
T05606
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111222535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111222535
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111222535
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111222535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
111222535
NCBI-ProteinID:
XP_022602017
UniProt:
A0A3B4TEF5
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MFSWGEDCQRGFWLKDSASGSDGEPEDGVHFLNLSYHIRDLSAGHSVLAFVKTNGNAFII
RTNESKDGRRVRGKQKFVKCKEKIQAVSCGDDLVTLLSDRGTVFCVDSTRPPFTPRPLEV
LCNIPVSQVACGSQHSVALTKDGQVYAWGQDSRGQLGLGKVKTDTNSPQHLRSLSAIPLV
QVAAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTRDRHTPTPVHCLNKKKTIHVSCGKDH
TAVLTKDGAVFTFGSGQYGQLGHNSFRDELHPRLVAELLGAKVTEITCGRHHTLVLTDSK
KVYAFGCREQGQLGHRDESHPSVPLPVQLPQDRGDGPKIRNIFAGGNCSFATCTCDEEVH
EESNTDSISNETQHCLDDMIDKWITKCDPKTWKKIKQEIHRSFSSASCLNKSFLEQSKDK
HFQTSAKYPGLNLSRARRAFKKLVKKDDVLAEVEAAILHLLLSFNKRPVGVEGLRIFLLL
NELLYVIQRCKRQKSTKLAEAVAAAVLGLSPVSLQVIGDWLSSLSTSTMVKYVKMWKQSL
SVILSYQPVPRNSGVRNLLLVLQYMYNVNSRIPESQRMQESDFCLSIDKGFLQEDLQLWR
SQLKRKSAHAEPLILCSFPIVLDLQSKKAVFDMNTFYTMVEAVRCAIRDFLMEFGCFPPC
PQDVLFVLDLSRASVLEDTFEQLADQEDYKKPLVVFFDENPTIDNVYTKDFFYEVFHKMV
SAESEMFMFNDSTTLAWFPSTAKQEHERYFLFGVLCGLALCSQCIIHLPFPMVLFKKLLG
VKPSLEDMMEFSPCVGKSLQNILEDDDIDDLDMCFLITWDGTDVDLDPENPEKPLTSQNK
KEFVDAYVNHAFNTSVESVFWEFRRGFFQACDRDIVRLFRPKELHEVLVGKDFHDWEKLK
TNTGYEGGYHVDHPTIQMFWEVFDELTEDQKKAFLWFLTGFERVPILGLENIKMIIRGLQ
VEDLSADQYYPQTHTCFSCLELPLYSTKEIMQTRLTEALSNNGRM
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatggggagaggactgtcagcgcgggttctggttaaaagactccgcctcaggt
agcgacggtgaaccggaggatggagttcacttcttaaacttgagttaccacatcagggat
ctgtcggcaggtcacagtgtgctcgcttttgtcaaaactaatggaaatgcgttcatcatt
cgcacaaatgagagcaaagatgggagaagagtcagaggaaaacagaagttcgtaaagtgt
aaagagaagattcaggcagtgagttgcggtgatgatttggtcacactgctgtctgacaga
ggcacagttttctgtgtggactcaactcgtccccctttcaccccaagaccgctggaagtt
ttgtgcaacataccagtttctcaggttgcttgtgggagccagcattcagttgctctgact
aaagatggtcaggtgtacgcatggggtcaggattccaggggccagctgggtctggggaag
gtgaagaccgacaccaactcaccccaacacctccgatctctgtcagcaatccccctggtt
caggtcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggc
tggggcagaaacgaccgtggacagctcggcctgggtgacacaagagacagacatacacca
actcctgttcactgcctgaacaagaagaaaacgattcacgtttcctgtggaaaggatcac
actgccgttctgacaaaggatggtgcagtgtttacatttggctccggtcaatatgggcag
cttgggcacaactcattcagggatgaactccatcctcgtcttgttgcagagctcttgggg
gcaaaggtcaccgagattacatgtggacgacatcacacattagtgttgacagactccaag
aaggtatacgcctttgggtgtagagagcaagggcagctgggacacagagacgagagtcat
ccgtcggtgccactacctgttcaactgccacaagacagaggagatggtcccaaaattaga
aacatcttcgcaggaggaaactgttcatttgcaacatgcacgtgtgatgaggaagttcac
gaggagtcgaacaccgacagtatcagcaacgaaacacaacattgtcttgatgacatgatt
gacaaatggatcactaaatgtgatccaaagacatggaaaaagataaaacaggaaatccac
aggagtttttcctctgcatcctgtttgaacaaaagcttcctcgagcagagcaaagacaaa
catttccagacgtcagcaaagtaccccggcttgaacttgtcacgtgcgcgacgtgctttc
aagaaactggtcaagaaggacgatgttttggcagaggtagaggctgcgatcctgcacttg
cttctatcctttaataagagaccggtgggagtggagggcttgaggatcttcctacttctc
aatgagcttctgtatgtgatccagagatgcaaacggcaaaaaagcaccaagctcgcagag
gcggtcgctgctgcagtactgggcttgtctcctgtaagccttcaggtcataggggactgg
ttgtcttcactgtcgacctccaccatggttaaatatgtgaagatgtggaagcagtccctc
tcagtcatcctgtcctatcagcctgttcctcgcaactctggagtcaggaatctgctccta
gtcctccagtacatgtacaatgtcaacagcaggatcccagaatctcaaaggatgcaggaa
agtgatttttgtttgtctattgacaaagggtttcttcaagaggacctgcagctttggcgt
tcacagttgaaacgcaagagtgcgcatgctgagccacttatcctttgcagctttccaatt
gtgctggatctgcaatcaaagaaagcagtgtttgacatgaatacattttacactatggtt
gaagcagtaagatgcgccatcagggatttcttaatggaatttggatgctttccaccatgt
ccacaagacgtgctctttgtactggacctgagtcgagcatcagttttggaggacaccttt
gaacaactggctgatcaggaggactacaagaaaccacttgtggtcttttttgatgaaaac
cctacaattgataatgtctacacaaaagactttttctatgaagtctttcacaagatggtg
tcagccgaatctgagatgttcatgttcaatgactccacaacactggcatggttcccctcc
acagcaaaacaggagcacgagaggtacttcctgtttggggttctatgtggcttggctttg
tgcagccagtgcatcatacacttgcccttcccaatggttctgttcaagaagctgcttggt
gtaaagccatcactggaggatatgatggagttcagtccatgtgttggaaagagtctgcag
aacatcctggaagacgatgacatagacgacctggatatgtgttttttaatcacctgggat
gggacagacgttgaccttgatcctgaaaatcctgaaaagccactgacaagtcaaaataag
aaggagtttgtggatgcctatgtgaaccatgccttcaacacatcagtggagagcgtgttt
tgggagtttaggcgaggcttcttccaagcgtgtgaccgggacatagtgaggctgtttcgg
ccaaaggagctgcatgaagtgctggtgggcaaagacttccacgactgggaaaagctgaaa
acgaacacaggttatgagggagggtaccatgttgaccaccccaccatacagatgttttgg
gaggtgtttgatgaactaactgaggatcagaagaaagccttcctttggtttctgacgggt
tttgaaagggtgcctattctcggccttgagaacatcaagatgataatcaggggcttacaa
gtcgaggacctctctgccgaccagtactaccctcagacacacacatgtttctcttgcctg
gagctgcccttatactcaaccaaggagattatgcaaaccaggctgacagaggccctgagc
aacaacggaagaatgtga
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