Seriola dumerili (greater amberjack): 111222808
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Entry
111222808 CDS
T05606
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111222808
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111222808
Transporters [BR:
sdu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111222808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
UL148
Motif
Other DBs
NCBI-GeneID:
111222808
NCBI-ProteinID:
XP_022602383
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MGEGEFLKGNSLEMPSQDNRLVTKTQLLDRGQWASKLEFLLAVAGTLVGLGNLWRFPYLC
YKNGGGAFLVPYVLFLLACGIPMFLLETAMGQFTSQGCITCWRHFCPLFEGIGYATQVVI
AYAAVSYIVIQAWAFFYLFSSFSAEVPWATCRNTWNTESCVEFDKTNASSNWTANATTPA
TEFWERRVLGISQGIEEIGSLRWELALCLLLAWILCYFCVWKGVRSTGKVVYFTATFPYL
MLVVLLARGLTLPGAMDGLAFYLYPDPTRLVDPQVWMDAGAQVLFSFGICQGSLTALGSY
NQYNNDCFKDTFVLCLVNGGSSFVAGFAIFSVLGFMSYEQGLPISEVAASGPGLAFIAYP
RAVAMMPLPQLWAICFFVMVILLGADTQFVSLECLMTSVTDMFPTVFRRAYRRELLLLCL
CSVCFFLGLLLVTEGGLYFLQLFDHYVCSGNNLLLLSVCQTIAIGWIYGADRLFDNIEDM
IGYRPWPIMKFCWLYITPAVCLGTFIFSLVRYKPLKFNKTYVYPTWAYALGWSLGLFCVL
LVPLWIIFKVTQMKGTIWQNVKQLCRPENKTHNTVKQPEQCPLNPDDTLTPAANDYKGSG
FTR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggagggggaattcctcaaaggaaacagtctcgagatgcccagtcaagataacaga
ctggtgacgaagacgcagctgttggatcgcggccaatgggcgagcaagttggagttcctg
ctggctgtagcaggaaccctggtcgggctgggaaacctctggaggttcccctatttgtgc
tacaaaaatgggggaggtgcatttctggttccatatgtcttgtttctgcttgcctgtggt
atccctatgttcctcctggagacggccatgggacagttcacatctcagggatgcatcacg
tgctggaggcacttctgccctttgtttgaagggattggctacgctacccaggtggtgatt
gcatatgctgccgtgtcatacattgtcatccaggcatgggccttcttctacctcttctca
tctttcagtgctgaagtcccatgggccacctgcagaaacacctggaacacagagtcttgt
gttgaatttgataaaacaaatgcgtcctcaaactggacagcaaacgcaacaacacctgca
acagaattctgggagagacgagtactgggtatatctcaagggattgaggaaattggtagc
ctgaggtgggagttggctttgtgtctcttactggcatggatcctgtgctacttctgtgtt
tggaaaggagtgagatccactggaaaggtagtttactttacagccacattcccctacctc
atgttggtggttctgttggctcgtggactcactctaccaggagctatggatggcttagct
ttctacttgtatcctgacccaacaaggttggtggaccctcaagtttggatggacgcaggc
gcacaggttctgttctcttttgggatttgtcaggggagtttgaccgccctgggtagttac
aatcagtataacaatgactgtttcaaagacacatttgttctttgcttggtgaatggcggg
tccagttttgtggcagggtttgcaatcttttctgttttgggcttcatgtcctacgaacaa
ggactgccaatatctgaagtggctgcctctggacctggtttggcatttattgcctatcca
cgtgcagtagccatgatgcctttacctcagctatgggctatatgcttcttcgtcatggtc
atcttgttgggtgcagatacacagtttgtgagtcttgagtgcctgatgacctcagtgacg
gacatgtttcccactgtgtttcgaagagcttatcgccgagagctgctgctgctttgtctc
tgctctgtttgcttctttctcggcctccttctcgtcacagagggtggcttgtatttcctt
caactctttgaccattatgtttgtagtggcaacaatcttcttcttctttcagtgtgtcag
acgatagcaattggatggatatatggtgcagaccgtctctttgacaacattgaagatatg
attggttatcgtccatggccaataatgaagttttgctggctttacattacccctgctgtt
tgtctgggtaccttcatcttttcattggtgagatacaagcctctcaagttcaacaaaacc
tacgtctacccgacctgggcctacgctttgggctggtctcttgggctgttctgtgttctc
ctagtcccactgtggatcatctttaaagttactcagatgaaagggacgatatggcagaac
gtcaagcagctttgccgccctgaaaacaagacacacaacacggtgaagcagccagagcag
tgccctctgaacccagacgacactcttacacctgctgccaatgattacaagggaagtggt
tttacaagatga
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