Seriola dumerili (greater amberjack): 111222867
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Entry
111222867 CDS
T05606
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111222867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111222867
03036 Chromosome and associated proteins [BR:
sdu03036
]
111222867
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111222867
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111222867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111222867
NCBI-ProteinID:
XP_022602474
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MSASSKRRRATSPSSSVSGGGDLDDTSSSTPGSGRKRRRTSNVPPVDMIAVCHELFNAVR
DHKDDQGRQLCEVFQRVPKRRNQPDYYDVVTQPIDMTKIQYKLKSEDYSDVEQLTADFQL
MFNNAKSFYKSDSEEYHAACKLWEVYLQTRNEFVQPGDGDEDDEDGDDMMDNPGMSAEDE
TSTGSLKEVLEQLLEAIVSHTDPSGRLVSELFQKLPSKVHYPDYYAIIKEPIDLRTIAQR
IQIGYYKGVNAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSS
LRIRNRRSGQGDRLSGVSVALHYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIF
QLYEAVRGARNNQGQVFSEPFQQLPSRREYPDYYQQIKQPIALQQIRAKMKNGEYESVDQ
MEADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKRRDLLRRDDEDGDSILSSDAGSVK
RKSHKKNVKKNRMKALYASVTEAREAGTNRRLCDLFMVKPSKKDYPDYYNVILEPMDLKT
IEHNVRNERYATEEALMEDMKLMFRNARHYNEEGSQVYNDADVLEKILKDKRKELGPPEE
EDVGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRAE
LPDYYATIKRPIDMERLRSHMAAGRYQDVEALVEDFALMFNNACIYNEPESLIYRDALVL
HRVLLETRKQQEGGEDSGPPAVGPLVRELIRNLFVSVLGHQDEEGRCYSDSLAEIPAVDP
ASPEKSPLNFDVIRMNVDRGRYRRLDVFQEHMFEVLEKARRLHRTDSEIFEDAVELQQFF
IKIRDELCKNGEILLSSALNFTFKHLHSDVEQEKREKIPKEIEEDKQKKEEEEKENKDGG
KVEDLPGESWQSESETERVYSQNCSFENSTYHVGDFVYVEPSEPNLKPHIVCIERLWEDE
AGEKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVLGKCVVMFVKDYFKMQ
PEGYRAEDVYVCESRYAARNKSFKKIKIWAMPESSVKLMSRELPLPVVRVASMFAKPDQD
RLTISYAESSSFVDKEREDVPMEMSGAEPGCQHFEQLRYNNMWYKVGDCVYIQSHGLSKP
RVARIEKLWVQNGTTFFFGPIFIHPEETEHEPTKMFYKREVFLSHLEETLPMTCVIGKCM
VSSFKEYLSCRPTEVSEEDILLCESRYIETEKQMKKFKGLKRFSYSAKVVEDEIYYFKKL
MVPQKEASPVLDKKIDELEVKLADMEDADDDIEDMDDEEEAPETPSMPQMQTPLVSDMDN
IPYTPSQSTPKVKGLSKKEGAKRKINMSGYILFSSEMRAVIKARHPDYSFGELSRLVGTE
WRNLEASKKAEYEERAAKIVEQQERERPPQKQASPRAGTPVGALMGVVPSPSTMGMINQT
MTPVSGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPHLPPHHLQQGMPGYPGMPHQG
MMGAGMNGMAGSPAQGNFMQQPGMFSPGQHAPPPYPGQGQLGQPSHLQPTTPMFVAPPPK
TQRVLHSEAYLKYIEGLNSESTTVSKWDQTLKAQRRDAHLTKEQESRLPAHWLKSKGAHT
TMADALWRLRDLMLRDSLNICQAYNL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagctccaagaggagaagagcaacttcaccctccagcagtgtcagcggaggg
ggagatctcgatgatacctcctcttctactcctggaagtggcaggaaaaggagaagaacc
tccaatgttcctcctgtagatatgatcgctgtatgccatgagttgttcaacgctgtcagg
gaccacaaggatgatcaagggaggcaactttgtgaagtttttcaaagggtaccaaagaga
aggaatcagcctgattattatgacgtggtgactcagccaattgatatgacaaaaattcag
tataaactgaagtcagaagattatagtgatgtggagcagcttactgcagatttccagctc
atgttcaacaatgccaaatctttctacaagagtgacagtgaggagtatcatgctgcatgc
aagctgtgggaggtgtatttgcaaacaaggaatgagtttgtgcagcctggagatggagat
gaggatgatgaagatggtgacgatatgatggataatccaggaatgtcagctgaggatgag
acctcaactggcagtttgaaggaggtgttggagcaactcttggaggctatagtgtcccac
actgatccctcagggcgtctggtcagtgaactgttccagaaactgccttccaaagtgcat
tacccagactactatgccattataaaggagccaatagatttgcgaacaatcgctcaaaga
atacagattggatactataaaggtgtcaacgcaatggccaaggacattgacctgatggcc
aaaaatgccaaaacgtacaatgaaccgggatctcaggtttttaaggatgctaacaccata
aagaaagtcttcatccagcggaagaccgaacttgaacacgccgaacccacaaaatctagt
cttcgcatcagaaatcgcaggtctggccagggggatcggctttctggtgtcagcgtggct
cttcactacggttcagagagtgaggacgaccctgttctctctggctccgtgtgctacgat
gagggagagtcagaggctgagagtcagagttctagtatggagatgagcaacccgatcttt
cagctgtatgaagctgtgaggggcgccaggaataaccagggccaggtcttctcagaacct
ttccagcaactgccctcgcgcagggaatatcccgattattaccagcagataaaacagccc
atcgctctgcagcagatcagggcaaagatgaagaatggggagtatgaaagtgtggaccag
atggaggctgacctcaatctgatgtttgagaatgcaaagcgctacaacatgcctaactca
agcatttacaaacgggccttcaggctccagcagatcatgcaggcaaaaagaagggacctt
ttgaggagagatgatgaggacggagacagcattctgtcatctgatgcagggagcgtcaag
aggaaaagccacaagaaaaatgtcaaaaagaaccgaatgaaagccctatacgcttcggtg
acagaggccagggaggcgggcaccaatcgacggctctgtgaccttttcatggttaaacca
tccaaaaaggactaccctgactactataatgtcatcctcgaaccaatggacctgaagacc
atcgagcacaacgtccgcaatgagcgctatgccacagaggaagctctgatggaagacatg
aagctgatgttccgtaacgccagacattacaacgaggagggatctcaggtgtataatgat
gctgatgttctggagaagatactgaaggacaagcgaaaggagttaggacctcctgaagaa
gaggacgtgggatctccaaaactgaaactaagaaagagtggtgtttctccaaagaaatcc
aaatacctcacccctctccagcagaggttgaatgagctctacgatgctgtgcgaaacttc
actgatcgccgaggacggcgtctgagcacaatcttcctccgtctgccctctcgtgccgag
ttgcctgactactacgctaccatcaagaggcccattgatatggagcgcttgcgaagccat
atggcggctggtcgttaccaagacgttgaagccctggtggaggactttgctctcatgttc
aacaatgcctgcatatacaatgagcccgagtctctgatctatcgggatgctctggtgttg
catcgggtgctactggagacacgtaagcagcaggagggaggcgaggactctgggcctcct
gctgtaggaccgctggtacgagagctgatcaggaacctgtttgtgtctgtgctgggccac
caggatgaagagggtcgatgctacagtgactcactggcagagattcctgctgtggatcca
gcttctcctgagaagtcaccacttaactttgatgtcatcaggatgaacgtggaccgagga
cgctacaggagactggatgttttccaggaacacatgtttgaagtgctggagaaagcacgg
aggcttcacaggactgactcagagatatttgaggatgcagtggagctgcaacagtttttc
attaagatcagggatgagctatgcaagaacggagagattctactgtcctctgcgctcaac
ttcacgtttaaacacctgcacagcgacgtggagcaggaaaagagggaaaaaattcccaaa
gagatcgaggaggacaagcaaaagaaagaagaagaggagaaggaaaataaagacggtggg
aaagtggaggacctgccaggagaatcgtggcagtcggagtcagagacagagcgtgtgtac
agccagaactgcagctttgaaaacagcacctaccacgtgggggacttcgtctatgtggag
ccgtctgagcccaacctgaagccacacattgtctgtattgaacgtctgtgggaggatgaa
gcaggtgagaagtggctgtatggttgctggttctacaggcccagtgaaaccttccacctg
gccacccgcaagtttctggaaaaagaggtcttcaagagcgactactacaacaaggtgtcc
atcagtaaagtcctgggaaaatgtgtggtcatgtttgtgaaggattatttcaaaatgcaa
cctgagggctacagagctgaggatgtgtatgtctgtgaatcccgctacgctgccaggaac
aagtccttcaagaagatcaagatatgggccatgcccgagagctctgtgaaattaatgtca
cgggagctgcctctgcctgttgtccgcgtagcctccatgtttgccaagcccgaccaagac
aggctgacaatttcatatgcagaaagcagcagttttgtggacaaggagagagaggatgtc
cctatggagatgagtggagctgagcctggctgtcagcactttgaacagttacgctacaac
aacatgtggtataaagtgggagactgtgtttacatccagtcacatggtctgtcaaagccc
cgggttgccaggatagagaagctgtgggtgcagaatggaactactttcttctttggaccc
atcttcattcatcctgaggaaacggagcacgagcccacaaagatgttctacaagagagaa
gtgtttctgagccacctggaggagaccttgcccatgacctgtgtcataggcaaatgtatg
gtttcctcctttaaggaatacctgtcatgcagacctaccgaggtttcagaagaagacatc
ctgctgtgcgagagccgctacattgagaccgagaaacagatgaaaaagttcaagggttta
aaacgcttctcatactccgccaaagtggttgaggatgagatctactatttcaagaaactg
atggtgccacagaaggaagcctcacccgttttggacaagaagatagatgagcttgaggtt
aaactggcagacatggaggatgcagatgatgatatagaggatatggatgacgaggaggag
gctccagaaacgccttctatgcctcaaatgcaaacgccacttgtaagcgatatggacaac
ataccatacacaccctctcagtccactcctaaagtgaagggcttatcaaagaaggaaggg
gccaagagaaagatcaacatgagtggctacatcttattcagcagtgaaatgcgagcagtc
atcaaagctcgacacccagattactcctttggggagctgagtcgacttgtgggcaccgag
tggaggaacctggaagcatccaagaaagcggagtatgaagaacgtgcagccaaaatagtg
gagcaacaagagcgtgagaggccaccccagaagcaagcgtcccctagagcaggtacccct
gtaggggcactgatgggggtggtgccttcgcctagcactatgggaatgataaaccagacc
atgacacctgtgtcaggcatgatgggagcttacggcccaccttacatgcccatgcagggc
ccccatgagggcttgttgagtgtggccccaatgccacctcaccctgcaggggggccccac
ctgcctcctcaccatctacagcaaggtatgcctgggtaccctggcatgcctcatcagggt
atgatgggtgctggtatgaatggcatggcaggaagtcctgcacaaggaaactttatgcaa
cagcctgggatgttcagcccaggacagcatgctcctcctccatatccaggacagggccag
ttaggccagccctcacacctgcagcccaccactcccatgtttgtggctccaccaccaaag
acccagagggtgctccactcagaggcctacctgaaatacattgagggcttgaattcagag
tctaccactgtcagcaagtgggaccaaacacttaaagctcaaaggcgagatgctcacctg
accaaagagcaggagagcagactgccagctcactggctaaagagcaaaggagcccacacc
accatggcggatgcactgtggcgcctgcgtgacctgatgctgagagactctctaaacatc
tgtcaggcatacaacctgtaa
DBGET
integrated database retrieval system
