Seriola dumerili (greater amberjack): 111223061
Help
Entry
111223061 CDS
T05606
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111223061 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111223061 (clasp2)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111223061 (clasp2)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111223061 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_GCN1
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TPR_DNAAF5
TOR1L1_N
TPR_CAND1
Cnd1
HEAT_MROH2B_C
VPS15-like_hel
ParcG
HEAT_DAAF5
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
111223061
NCBI-ProteinID:
XP_022602776
LinkDB
All DBs
Position
Unknown
AA seq
1533 aa
AA seq
DB search
MEDHDNMDYFYQQVLQKDVTRRLQVGQDLIDYLNDPHRSQDVEQDKSRLDKTIDELTGWV
NSSNFKVALMGIDICSAFVDRMGERFKGYLGTVLPALVDRLGDGKDQVRENSQGLILRCM
EQTTSPMYVWERLLPGFKHKNFRSREGVCLCLSATLNTYGAQPLSLSKLVPHLCSLTGDQ
NPQVRETSITTLVDVYRHVGERVRADVGKRGLPAARLQTIFSRFDEALNSGNMALSPSHD
RSFEDDDSVDGSRSSSAQAAFKVPKVPKKPAESSAARRPSATGGKLVSKESAGAVDEEDF
IKACTDVPPVQIYSSRDLEDNLNKIREVCSDDKHDWDQRANALKKIRSLLVAGAANYDCF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSLVLGNKFDHGAEAIVPVLFNLIPNCA
KVMATSGVSAIRIIIRHTHVPRLIPLITSNCTSKSVAVRRRCYDFLDLLLQEWQTHSLER
HTAVLVESIKKGIRDADSEARVEARKTYWGLRNHFPSEADALYNSLEPSYQRTLQSCLKN
SGSVASLPQSDRSSSSSQESLNRPLTSKWSAAPGRVPAGSKGGLSAASLQRSRSDVDVNA
AAVAKHRHVGQAGGAGRLAPGSYSSLDDASDKTDGRVRTKQPLSTPSSMSSQVDSRGRSR
TKMVSQSQPGSRSGSPGRVLTSTALSTMSSGAHRVLAGSTGDGHRRSRIPRSQGCSRDSS
PTRLSVAPSSISSIYNGASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLAPR
SYSRSTGALHTPDAFGAAGSGFGISQSSRLSSSVSAMRVLNTGSDVEEALADALLLGDMR
SKKKPARRRYENYSMYSDDDANSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCA
SANWSERKEGLLGLQALLKNQRTLSRVELKRLCEIFTRMFADPHSKRDSGRVYGTAESGI
SSASFKRVFSMFLETLIDFILVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDV
TRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEAPDFVNSSETRLAVS
RIITWTTEPKSSDVRKAAQSVLIALFQLNTPEFTMLLAALPKTFQDGATKLLQNHLKNTG
NAAQAPMGSPLTRHTPRSPASWSSPVTSPTNTSQNTPSPSAFDYDTENMNSEDIYSSLKG
VTEAIQNFSVRSQEDMNEPVQRREGEEGGSGIDGRVSDLMDGGRMALDNKTSLLNTPLLS
SSPRGAREHFSDSPFKHSRKDTSLDDSEHLTDDSSLDQSELVAELLKELSNHNERIEERK
AALCELQKLIRENTLQVWDEHFKTILLLLLETMGDREHVIRTLALRVLREILSKQPWRFK
NYAELTIMKALEAHKDPHKEVVRAAEETAAMLALSISPDQCIKVLCPIIQSADYPINLAA
IKMQTKVVERIPKEGLISLLPEIVPGLIQGYDNSESSVRKACVFCLVAIHAVIGEDLKPH
LSQLSSSKLKLLNLYIKRAQSGSSGSEPPTEGL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatgacaacatggactatttttatcagcaggtactgcagaaagatgttacc
cgcaggttgcaggttggtcaggaccttattgactacctgaacgacccgcaccgttcccag
gacgtggaacaggacaaatcccggctggataagaccatagacgagttaacgggatgggtg
aactccagcaatttcaaggtggcattgatggggatagacatctgcagtgcgtttgtggac
cgcatgggagagcggttcaaaggatacctaggcacagtcttgccagctctggtggacagg
ctgggtgatgggaaggaccaggttagggagaacagccaaggtcttatccttcgctgcatg
gagcagaccacctcgcccatgtatgtttgggaaaggctgcttcctggtttcaaacataag
aacttccgcagtcgagaaggagtctgcctctgtctcagtgccacgctcaacacgtatgga
gcccagccgctgagcctcagtaaattagttcctcatctctgctctctgactggagatcag
aacccacaggtacgtgagacctccataacaacattggtggatgtttatcgtcacgtcgga
gagagggtgagagcagacgtgggaaagagaggactgcctgctgcacggttacagacgata
ttttcccgttttgatgaagccttgaattcaggcaacatggctctcagcccaagtcacgat
cgcagttttgaggatgacgacagtgtggatgggagtcgttcttcctcagcccaggctgct
ttcaaggtcccaaaagttcccaagaagcctgcagagtcctccgctgcacgcaggcccagc
gctaccggtggcaagctagtatctaaagaaagtgccggggcagttgatgaagaagatttc
attaaagcctgcacagacgtccctcctgtgcagatctactcgtcaagagatcttgaagac
aacctgaataagatccgtgaggtctgctccgatgacaaacacgactgggaccagagagcc
aatgccctgaaaaagatccgctctctgctggtggcgggagcagccaactacgactgtttt
taccagcatctacgcctactagatggagctttcaaactgtcagctaaagacctgcgatca
caagtggtccgagaggcctgcatcactgtggcccacctctcattagtgttggggaataaa
tttgaccatggagcagaagccattgttcctgtcctgttcaacctcatccccaactgtgcc
aaagtcatggccacctccggtgtgtcggctatccgcatcatcatacggcacacgcacgtc
ccgagactcatccctctgataaccagtaactgcacatccaagtctgttgctgttagaagg
cgctgttatgatttcttggacctgctgctacaggagtggcaaacccactctctagagagg
cacacagcagttctggttgagagcatcaagaagggaattcgagatgctgactcagaggcc
agagtggaggcccgcaagacctactggggtttgaggaaccactttccatcggaggccgac
gctctctacaactccttggagccatcgtaccagaggacccttcagtcctgcctgaagaac
tctggcagtgtggcatcacttccccagagtgaccgttcctcatcttcctctcaggagagc
ctcaatcggcctctgacttctaaatggtcagcagctccagggcgagtccctgcgggttca
aagggtgggttgtcggcggcctccctgcagcgctcccgtagtgacgtggatgtaaatgca
gcagcagtcgctaagcaccggcacgttggacaggctggtggagcaggccgactggcccct
ggctcctactcctcactggatgatgcctctgataaaacggatggtcgtgtacgtaccaag
cagcccctgtccactcccagcagcatgtccagccaggtggactcacgaggacgtagccgc
accaagatggtctcccagtcacaacccggcagtcggagtggctcccctggtcgtgtgctg
acaagtacggccctgagcaccatgagctcaggggcccacagggtgctggctgggtccact
ggggacggacacagacgcagccgtatcccccgcagccagggctgctccagagactcttcc
cccactcgtctgtctgttgctccttccagcattagttccatctacaacggagcgagtaga
ggagctcggggcagtcgtatccctcggcccagtatgagtcagggctgcagcagagaggcc
agcagggagagcagccgggacaccagccccgtacgctccttcacaccacttgcaccgcgg
agctactctcgctccaccggagctctccacacacctgatgcttttggggctgcaggatca
ggttttggcatcagtcagtccagtcgtctctcttcttctgtcagtgccatgagggtcctc
aacacaggctcagacgtagaagaggctctcgcagatgcactgctgttgggagacatgcgg
tccaagaagaagccggcacggcggcggtacgagaactacagcatgtactctgatgatgac
gctaacagtgacgcatccagcgcctgttcagaaaggtcctatagctcccgaaatggagga
gccatcccgacctacatgagacagacagaagacgtggctgaggtgctgaatcgctgtgcc
agtgccaactggtctgagaggaaggaggggctgttaggccttcaggcattacttaagaac
caacgcaccctcagtcgggtagagttgaagaggctgtgtgaaatcttcaccaggatgttt
gcagaccctcacagtaagcgagactccggcagggtgtacggcacggcagaatccggtata
agctcagcctccttcaagagagtattcagcatgttcctggagacgctgatagacttcatc
ctggtccataaggacgacctgcaagactggttgtttgtcctgctcacacagctgctgaag
aagatgggagctgacctgctgggctccgtacaggccaaagttcaaaaagccctggatgtc
actcgagagtctttccccaatgacctccagtttactattctcatgaggtttactgtcgac
cagacacagacgcccaacctcaaggtgaaggtagccattctgaagtacatcgagacgctg
acgttacaaatggaggctccagactttgtgaactccagtgagactcggttggccgtctcc
cgcatcatcacctggactactgaacccaagagctctgatgtcagaaaggcagcccagtcg
gtgctaatcgccctgttccagctgaacactccagagttcaccatgctgctggcagctctg
cccaaaacctttcaggacggagccaccaagctgcttcaaaaccatctgaaaaacactggc
aacgctgcacaggcaccaatgggcagccctctgacgcgccacaccccccgatctccggcc
agctggtccagcccggtcacttcccccaccaacacctcccagaacaccccctcaccaagt
gcttttgactacgacacagagaacatgaactcagaagacatctacagctcgctgaaaggc
gtcactgaggcgattcagaacttcagcgtccgcagccaagaggacatgaatgagccagtc
caacggcgggaaggagaggagggcggcagcgggatagacggcagagtatcggacctgatg
gacggcgggcgcatggctctggacaacaagacttccctcctcaacaccccccttctctcc
tccagcccccgaggtgcccgcgaacacttctccgactctcccttcaaacacagccgcaaa
gacaccagcctggatgactctgaacatctcaccgatgatagcagcctggaccagtcggag
ctagtggccgagctgctgaaggagttgtccaatcacaatgagcgtatagaggagaggaag
gcagcgctgtgtgaactgcagaagctgattcgcgaaaacaccctgcaggtgtgggatgaa
catttcaaaaccatcctgctgctcctgcttgagacaatgggtgacagagagcatgtgatc
cgaacactggctctgcgggtgctgagggagattctcagcaagcagccctggaggttcaag
aactatgcagagctcaccatcatgaaggccctggaggctcacaaagaccctcacaaggag
gtggttcgagcagcagaggagacagcagccatgttggcattgtccatcagtcctgaccag
tgtatcaaggtgttgtgccccatcatccagtcagctgactaccccatcaacctggctgcc
atcaagatgcagaccaaagtggtggagaggattcccaaagagggtctgatcagcctgctg
cctgagatagtgccaggactcatacagggttatgacaactctgagagcagtgtgaggaaa
gcctgtgtgttctgcttggtggccattcatgcagtgatcggagaggacctcaagccgcac
ctcagccaactctccagcagcaagctgaagctgttgaatctgtacatcaagcgtgcccag
tccggctccagcggcagtgaacccccaactgaaggcctatag
DBGET
integrated database retrieval system
