Seriola dumerili (greater amberjack): 111223072
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Entry
111223072 CDS
T05606
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111223072
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111223072
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Others
Others
111223072
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
111223072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
DarA_N
USP7_C2
Motif
Other DBs
NCBI-GeneID:
111223072
NCBI-ProteinID:
XP_022602810
UniProt:
A0A3B4V2T8
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MADVEGDETRSALPSASRNGPVVGSSAGTTGQIVATATSGPRVVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVSVEGATHKQVVDL
IRAGEKELVLAVLSVPPQEADGLEGVEDVQPNYDYSDKQAVPISIPTYKHVEQHSERFVV
YNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEY
LERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQ
ALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLF
SFQEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCE
GYNEVMFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWGEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCSNN
EFLPPLETQQKGWRHLGGEIATS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtagaaggcgatgaaactcgttcggctctcccttcggcatcccgtaacggt
ccggttgtcggttcgtcggcgggcaccacgggccaaatcgtagctacggcaacatcgggt
ccacgggtggtgaggattgtcaagtcggagtccggctacgggttcaatgttcgcggtcaa
gttagtgaaggaggacagctccggagcatcaacggggaactgtacgctcctcttcagcat
gttagcgctgttttgcccggaggtgcggcggaccgagctgggatagcaaagggtgaccgg
atcctggaggttaatggggtgagcgtggaaggtgccacccataagcaggtagtggacctg
atccgtgcaggggagaaggagctggttctggctgtgctctctgttccacctcaggaggct
gatggattggaaggagtagaggatgtccaacccaactatgactacagtgacaagcaggct
gtgcccatttcaattcccacatataaacatgtagagcagcactcggagaggtttgtggtg
tacaatgtgtacatgtcaggtagacagctgtgctcaaagcgataccgagagtttgccatc
ctgcaccagaacctaaagagggagttttccaacttcaacttcccaaagcttcctgggaaa
tggcccttctccctctctgagcagcagctggatgctcgccgtagaggcctggaagagtat
cttgagcgagtttgctctgtgcgggtgatcggggagagtgacatcatgcaggagtttctc
tctgaatcagatgagaactacaatggagtaacggatgtagaactgcgcatagccctgcca
gacaagaccaccatctctgtcagagtccgtaagaacagcacaacagaccaggtgtaccag
gcattagtgatgaaggttggaatggacagtattatggcgagctactttgccctttttgaa
gtcatcaaccactcctttgtacgaaagctggcacctaatgagtttccccacaagctttat
gtgcagaactacacatcggcagtgccggggacttgcttggcgcttcgcaaatggttgttc
agcttccaggaggaggagttgctcagagacaacccgctggcactgcactactgctttcac
caggcactggatgatgtgaagaagggattcataaaaacggaggacaaatcctaccagctg
cagaaactggcagagcagcgcaagatggccacgtacctgagcctgttgcggacatgtgag
ggctacaatgaggtgatgttcccccactgctcctgcgactccaggaggaagggtcatgtc
atcacggctatcagcatccatcacttcaagctgcacgcttgcactgaggacggcacgctg
gagaaccaggtgatagcttttgagtggggggagatgcagcgttgggacactgacgaggag
gggatggccttctgctttgagtacgccagaggggagaagaaacctcgctgggtcaagatc
ttcactccatattttaactacatgcacgagtgctttgagcgggtcttttgtgagctgaag
tggaggaaacaggttgaggaagaggcatctgacaaagacaacaaaaactgcagtaacaat
gagtttctgcctcctcttgagacacagcagaagggatggcgccacctagggggggagatt
gcaacttcctaa
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