Seriola dumerili (greater amberjack): 111223077
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Entry
111223077 CDS
T05606
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
sdu03083
Polycomb repressive complex
sdu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111223077
03083 Polycomb repressive complex
111223077
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
111223077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111223077
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111223077
Histone modification proteins
HAT complexes
HATB complex
111223077
HDAC complexes
Sin3A-HDAC complex
111223077
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111223077
PRC2.2
111223077
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111223077
Heterochromatin formation proteins
Other heterochromatin formation proteins
111223077
Chromatin remodeling factors
NuRD complex
111223077
NuRF complex
111223077
NuRF complex (fruit fly)
111223077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111223077
NCBI-ProteinID:
XP_022602817
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADKEAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDVNGECRPDLRLRGHQKE
GYGLSWNANLSGCLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGATD
PEATA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagctggtgcatttgacgatgcagtggaggagagagtaattaatgag
gagtacaagatctggaagaaaaacacccccttcctctatgacctggttatgacccatgct
ttagagtggcccagcctcactgctcagtggctgcctgatgtctccaggccagaggggaag
gattacagtgtacacagactggtgctgggcactcatacatctgatgagcagaatcaccta
gtcattgctagtgtccagctgcccaatgatgatgcccagtttgacgcctcacattatgac
agtgaaaaaggagagtttggaggctttggctcagtgagtggcaagatcgagatagaaatc
aagattaaccatgaaggagaggtcaaccgtgcccgctacatgccacagaatccctgcatc
attgccactaagacccccacctcagacgtgcttgtgtttgactacaccaagcatccttcc
aagccagatgttaatggagagtgccgccctgatctgcgactcagaggtcatcagaaagag
ggctatggtctatcctggaatgcaaatctgtctggctgtctgcttagtgcgtcagatgac
catacgatctgtctgtgggatataagtgctgtgccaaaggaggggaaaatagttgatgca
aagacgatcttcaccggtcatactgctgtggtggaagacgtctcttggcacttgcttcat
gagtcactctttggatctgtagcagatgaccagaagctcatgatttgggacactcgttca
aacaacacctccaaacccagccatgcagtagatgcccacactgcagaggtcaactgcttg
tcatttaacccttacagcgagttcatccttgccactggctctgcagacaagactgtggct
ctttgggatttgagaaacctgaaactgaagctgcattcctttgagtcacacaaggatgag
atcttccaggttcagtggtcacctcataatgaaactatactggcatccagtggaacagac
cgtcgcctcaatgtctgggatctcagtaaaatcggagaggagcagtccccagaagatgct
gaggatggtcctcctgagctactgtttatccatggaggacacacagccaagatctcagac
ttctcctggaaccccaatgagccctgggtgatttgctctgtgtctgaagacaacattatg
caagtctggcaaatggctgagaacatctacaatgatgaagatcctgagggtgcaacagac
cctgaagccacagcgtaa
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