Seriola dumerili (greater amberjack): 111223082
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Entry
111223082 CDS
T05606
Name
(RefSeq) myocyte-specific enhancer factor 2D homolog isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111223082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111223082
04131 Membrane trafficking [BR:
sdu04131
]
111223082
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
111223082
Membrane trafficking [BR:
sdu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111223082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
RNase_H2_suC
DDHD
PAT1
Piezo_TM1-24
CCDC53
EIF4E-T
VPS13_N
EOS1
DUF6080
Motif
Other DBs
NCBI-GeneID:
111223082
NCBI-ProteinID:
XP_022602825
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MGRKKIQIQRITDERNKQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHANKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSIDQSPLNDEKYRKT
TEDLDVLFKRYGQPTAPPQTFSMPVTVQASNQSTLQFSNPGNALVTTSYVTSSSLTDTHL
LSPQQPALQRNTVSPGLPQRPASAGALLGGDLNNSNGGCPSPVSNGYTSARASPGLLTVS
NGNSLGKVVPAKSPPPPPSPQMVNSRKPDLRVITSQGGKSLMQMTEDELELVNENAQRLA
AGAQVAQTLTTPVVSVATPSLLAQGLPFSAMPTAYNTEYQLTSADITALHALASPGGLLP
TSVSTWTQQQAVSQQPQQQQQQQQQQQTQQQQQQQQQQQQQQQQQLNLASLSNLVMWGVD
KQSSELSSQVSSLAANLSVGSPSNLLLGRDEWLGRPVTHIPQGAMLTVNTNSSISIKSEP
VSPGRDRSTPCPPPSSTTPSSTSGGAILTAPPQYPGSLLCLEPPTGRSPADSVSSNASSF
EGSDRDDTGAAGGGGGSGGAGGGGGGGSSTAGTTGPASRSVPPDFSPSAELLRASNEPEQ
EGGNIKRMRLDTWVT
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaaagattcagatccaacggatcaccgacgaaaggaacaagcaggtgaca
ttcacaaagcgaaagtttggcttgatgaagaaagcctatgagctgagtgtattgtgtgac
tgcgagattgctctgatcatcttcaaccacgcgaacaagctgttccagtatgccagcact
gacatggacaaggtcttgctcaaatacacagagtacaacgagcctcatgagagccggacc
aatgcagatatcattgagactttgagaaagaaaggcttcaacggttgtgacagtccagag
ccggatggtgaagactccattgaccaaagtcccctgaatgatgagaagtaccgtaagacc
acagaggacctggatgttctcttcaaacgctatggacagccaacagctccgccccagacg
ttctccatgccagtcacagtccaggcgtccaatcaaagcacactgcaattcagtaaccct
ggcaacgcactggtaactacctcctatgtaacatcatcgtcgctcacggatacccacctc
ctgtcaccacagcaaccagctcttcagagaaatacggtgtctcctgggttgccacagcga
ccagccagcgcaggtgctcttcttggaggcgacctgaataattcaaatggaggatgccca
agtccagtctctaatggatacaccagtgccagggcctccccaggcctcctcaccgtttcc
aacggcaacagtctggggaaagtagttccggccaagtctccacccccacctcccagcccc
cagatggtcaacagccgcaagccagacctccgagtcatcacctcacagggcggaaagagc
ctcatgcagatgacagaggatgagctggaattggtaaacgagaacgcccagcggctcgcg
gctggagcccaggtggcacaaacgctcacaacaccagtggtctctgtagccacaccgagc
ctcctggcacaggggctgcccttctctgccatgcccacagcgtacaacacagaataccag
ctgaccagtgcagacattactgctttacatgctctggcatcacctggtggcttgttgcca
accagtgtgtccacatggacacagcagcaggctgtttcccagcaaccgcagcaacagcaa
caacagcagcaacagcagcaaacacagcagcagcagcagcagcagcagcagcaacaacag
cagcagcagcagcaacttaatcttgcatcactcagcaacttggtcatgtggggcgtggac
aaacagagcagcgagctgtctagccaggtgtccagtctggctgccaatctgagtgttggc
tctccgtccaacctgctcttgggtagagatgagtggttgggccggccggtgacccatata
cctcaaggtgccatgctgaccgtcaacacaaactccagcataagcatcaagtcggagccc
gtctcacccggccgggatcgcagcaccccttgccctcctccttcctccaccacaccgtcc
tcaacctcaggaggagctatcctgactgctccgccgcaataccctggctccctgctgtgc
ctggaacccccaaccggccgctcgcctgcagacagcgtaagcagcaatgccagctccttt
gaaggcagcgatcgtgatgacaccggcgcagctggcggcggcggtggcagcggaggtgca
ggtggaggcggcggtgggggcagcagcacggctggcactacaggtcctgccagccggtcc
gtgccacctgacttcagcccctcggccgagctcctcagggcgtccaacgaaccagagcag
gagggaggaaacattaagcgcatgagattggacacctgggtcacatag
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