Seriola dumerili (greater amberjack): 111223122
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Entry
111223122 CDS
T05606
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdu03032
]
111223122 (recql4)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111223122 (recql4)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111223122 (recql4)
DNA replication proteins [BR:
sdu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111223122 (recql4)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111223122 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
ResIII
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
111223122
NCBI-ProteinID:
XP_022602871
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MDRYKEVKLLLKGWEQGFVKQHQRKPNKEDIDQAPEETRKLYKEYRTLKQAKENSSSDAA
SEHAEQSRSTAKSDSWGAHLNRSMLPVSSPRLTSQDRDSLKASAQYYGLKLKNNLATLSK
EKPVSLKKSALPGRVPLNSLKGGLTGQTNSPVAAAATDKTTSTDPKSSPFSPRRVTTFPR
PLASKTLHPVEPEEQFEPVEPVGKFSDELSDAANSCGSNVSSRSCTSNVISSQNQNASSL
APSAARSSALLSLSPPCSVETSREDVGTTGKLDDSIGASGEKKVNSETLGTPHRGMFPLR
GSPQFLGGVRGGVGGNGTGGRPSPASRLGFVDRKWLERCQVFGEMGAAETPGAGNQEIDK
KIERKTEGEIQGGERVAKGEIETGGERRETIDMGRDEGFKGIPSDTMCSDSAPKPPRKPT
RKNKGKGGEELQGGQAPPPTPEGDGETSPKPKGTKKRGRKRQREGEDMEGEMTQEGGVKK
KRRNGKKKEESSGLNSGPARGEGKKRRTKKNGEEDGEGGEEKQSKVPKKVPQENLLGEIE
EEFVTKRMYHTQPVRASMKGAEGNFVKINLKKKSHVKGYALRGVALRKQLYMQKFQLKGE
RFGGGAGYFGRGRRGGFRGGLSRQGDTCYKCGGTGHWAIDCKGRAPPPPVPEEQPVEEEP
FELPTLEEVARATGTLRPQPLVSSPSVNEEQHQENEADHKHQDEVLLNVIRPDYERPAPP
PPMAPLYDLTDDGKVQATPADVYAALQDLGYKSFRPGQEEAIMRILSGLSTLVVLSTGMG
KSLCYQLPAYLYAQRSKCITLVISPLVSLMDDQLSGLPAKLKAACIHSNMTMKQREAAIE
KVKSGQVCVLLLSPEALVGGGGSGAGCLPSAQELPPVAFACIDEAHCVSEWSHNFRPCYL
RLCKVLRERLGVQCLLGLTATATLSTALDIAQHLDITDQDGIAVRSAAVPPNLRLSVSMD
REKDQALVSLLRGDRFGCLDSVIVYCTRREETTRVAALLRTCLQGVLVKENKQISSSSQT
QNNPVGQRKKELARKKIRKPLKWQAESYHAGLSASERRRVQNNFMCGELRIVVATVAFGM
GLDKSDVRGIIHYNMPKSFESYVQEIGRAGRDGEPAHCHLFLDPEGGDLHELRRHIYADT
VDYYTVKRLVQKVFPPCKCKRIHQKQQELIKDVEDAELLEMMDACDQESNLNPPSHPNPE
SADAQESSHPDSVELPVQEGSDERKEEEEKKEEQVVKDEGADGLVKNQDVEVKAAGDSPR
DYERESKDWPRERVCHTHERAIPIQQTVEALDITEEGVETLLCYLELHPQRFVELLHPTM
SVCKVSCYDGPRQLQKIMKICPPVAVVLARRRMAGERVETCDQLEFDVVEVADTMGWQLP
LVKRGLRQLQWSTDRGLFTTGGRSGILVEFSSPSFYFRSYGDLSDEEMDRVCQFLHNRVQ
DQERTQLYQLTTCFKSFKSVAFQSVLSCVDDLDVSRSLQLKNLLSEYFDKRRDRAHTLRP
VDIEELDKYKLLDWESQIRADIRSFLSNRSDEKFSGRAVARILHGIGSPCYPAQTYGRDR
RYWRKYIQFDFNQLIRLATQEIIHFK
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctacaaagaggtgaagcttctgctgaaaggctgggagcaggggtttgtcaaa
cagcaccagaggaaacctaacaaggaggacattgaccaagctccagaagagaccaggaag
ctgtataaagagtatcgcactttaaaacaagccaaagagaacagcagcagtgatgcagcc
agcgaacacgctgaacagtccagatctacagctaagtcagacagctggggtgcccatctg
aatcgtagtatgttgccggtgtcttctcctagactaacatcccaggacagagacagtctt
aaggcctcggcccaatactatggcctaaaacttaaaaacaacctagccacactcagtaag
gagaaacctgtctcactgaagaaatcggcccttcctggtcgtgtgcctcttaactcctta
aaaggtggactgactggtcagacaaacagccctgttgctgctgctgccactgacaagacc
acgtccactgaccccaaatccagccccttctcaccaagaagagtaacgactttcccacgg
cccctggcttcaaagacactacatccagtggagcctgaagagcagtttgaaccagttgag
cctgttggaaagtttagcgatgaactttcagatgctgccaatagttgtggtagtaatgtt
agtagtagaagttgtaccagtaatgtcattagctcacaaaatcaaaatgcctcgagtcta
gctccctctgcagccagatcttctgccttgttgtcgctgtctccaccgtgtagcgttgaa
acttcaagagaagatgttggaaccacagggaagttagatgacagtataggagcttcagga
gagaaaaaagtgaattctgagacattaggaactccacataggggtatgtttcctttgaga
gggagcccacagttcctcggaggtgtcagaggaggagtgggaggtaacggtactggagga
aggccctctcctgccagcaggctgggttttgttgataggaagtggttagagaggtgtcag
gtgtttggggagatgggggcagcggagacgcctggggcaggtaaccaggagatagacaaa
aaaatagagagaaaaacagaaggagaaatacaggggggtgaaagagtagcaaaaggagaa
atagagacagggggagaaagaagagaaacaatagacatggggagagatgaaggctttaag
ggtattcccagtgacacaatgtgcagtgatagtgcaccaaaacctccccgaaaacccact
agaaaaaacaaagggaagggaggtgaggagttgcaaggagggcaggcgccacctccaaca
ccagagggtgatggtgagactagtcccaagcccaaaggtacaaagaagagagggaggaag
aggcagagagagggagaggacatggagggagagatgacacaggagggaggagtgaaaaag
aagaggaggaatggcaaaaagaaagaggagagctccgggttgaactctggcccggctcga
ggagaagggaagaaaaggagaaccaagaaaaatggagaggaagatggagagggaggagag
gagaaacaaagcaaggtaccaaaaaaggtgcctcaggagaacctgttaggagaaatagag
gaggaatttgtgactaagagaatgtatcacactcagcctgtcagagccagcatgaaaggt
gcagagggtaactttgtgaagataaatctgaagaagaaatctcatgtcaaaggatatgca
ctcagaggggtagctctccgcaaacagttgtacatgcagaaattccagctgaaaggcgag
cgttttggtggaggtgctggatattttggcagaggaaggagaggaggcttcagagggggg
ctcagtcgccagggtgacacctgctacaagtgtggagggactggacactgggccatcgac
tgcaagggacgagccccccctcctcctgttcctgaggagcaacctgttgaagaggagccc
tttgagctgccaactctggaggaggttgccagggcaacgggaacactgcgacctcagccg
ctcgtgtcttctcccagcgtcaacgaggagcagcaccaagaaaatgaagcggatcataag
catcaagatgaggtgttgttgaatgtgattcgtcctgactatgagcggcccgctcctccc
ccaccaatggcaccactgtatgatctcacagatgatggaaaagtccaggcaacacccgct
gatgtgtatgcagctctgcaagacctcggctataagtcatttagaccaggacaggaggag
gccatcatgaggatcctgtcaggtctctctaccctcgtagtgttgtcaacagggatgggt
aaatcgttgtgctatcagcttccagcctacctgtatgctcagaggtcaaagtgcatcaca
ctggtcatttcacctcttgtctcactgatggatgatcagctgtctggcctgccagccaag
ctgaaggcagcctgtatccactccaacatgacgatgaaacagagagaagctgcgatagaa
aaggtgaagtcaggccaggtgtgtgtgttgctgctctctccagaggctttggttggtgga
ggtggctcaggagcagggtgtctgccctccgctcaggagctccctcctgtggccttcgct
tgtatcgacgaagctcattgtgtctctgagtggtcacacaacttcagaccctgttacctg
aggctctgtaaggtgctaagggagcgtttgggagtgcagtgcttactgggacttactgct
acggccacactgtctactgctctggacatcgctcagcatctggacatcactgatcaagat
ggcattgcagtcagatctgcagcagttcctcctaacctgcgtctgtctgtgtccatggat
agagagaaggatcaggctttggtgtccttgttgagaggtgatcgttttggttgtctggac
tccgtcattgtctactgcaccagaagagaggagaccactcgtgtggcagctctcctcagg
acctgcctgcagggagtgctggttaaagaaaacaagcaaatcagcagcagcagccagaca
caaaacaaccctgtaggacagagaaagaaagagctggcaaggaagaagattcgtaaacca
ctgaaatggcaggctgagtcgtaccatgccggcctctcggcatcagagcgccgtcgtgtc
cagaacaacttcatgtgcggggagcttagaatagtggtggccactgtggcgtttggcatg
ggcctcgataaatctgacgtccgtggtatcatccactacaacatgccaaagagcttcgag
agctacgttcaggagattgggagggcagggagagacggagaaccggcccactgtcacctc
ttcctggaccctgagggtggagacctccatgagctccgtcgtcatatctatgcagacaca
gtggactactacacagtaaagaggctggtgcagaaagttttccctccatgcaaatgtaaa
cggatacaccagaaacaacaggaactcatcaaggacgttgaagacgctgagctgttggag
atgatggatgcgtgtgatcaggagagcaaccttaaccctcctagtcaccctaatccagaa
tctgctgatgcacaggagtcgtcacatcctgattcagtggagttacctgtccaagaaggc
agcgatgaaagaaaggaggaggaggagaagaaagaggagcaggttgtaaaagatgaggga
gctgatggtttggtgaaaaaccaggatgtggaggtgaaggcggccggtgattcgccgagg
gattacgaaagagagagcaaagattggcccagagagcgagtgtgtcacacgcacgagaga
gcgattcccatccagcagactgtcgaggctctggatatcacagaggaaggagtggaaaca
ttgctgtgctatctggagctgcatcctcagcgcttcgtcgaacttctgcaccccaccatg
tctgtgtgtaaagtcagctgctatgatggaccgaggcagctccagaaaatcatgaaaatc
tgtcctcctgttgctgtggttctggcccgaaggcggatggcgggcgagcgagtggagacg
tgtgatcagctggagtttgatgttgtcgaggttgcggacactatggggtggcagcttcct
cttgtgaagagaggactcagacagctgcagtggagcactgatagaggtttgtttacgact
ggcgggcgtagcggcatcctcgttgaattctcctccccatccttctacttccgctcctat
ggagaccttagcgatgaggagatggacagagtttgtcagttcctccataatcgcgtgcag
gaccaagagagaacacagctctaccagctgaccacctgttttaagtccttcaagagtgtt
gcttttcaaagcgttttgtcctgcgttgatgatttggatgtgagccgcagtctgcagctg
aaaaaccttctctctgagtactttgacaagaggcgagaccgagcccacacactcagacca
gtggacattgaggagctcgacaagtataagctgctggactgggaaagccagatcagagcg
gacatcagaagttttctatccaaccgcagtgatgagaaattttctggaagagctgttgct
agaatcctccatggcataggcagtccgtgctatcctgctcagacctacggcagagacaga
cgctactggaggaagtacatccagtttgacttcaaccagctcatcagactggccactcag
gagatcattcacttcaagtga
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integrated database retrieval system
