Seriola dumerili (greater amberjack): 111223220
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Entry
111223220 CDS
T05606
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111223220
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111223220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2HE
Zap1_zf1
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
111223220
NCBI-ProteinID:
XP_022603003
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MKLDSTPGDMSGWREVDFALNCTYIVPDQVSDPSFSLPKAMTSIPRNLTFEYGTDNEVTG
VFSKEYIPKGTRFGPLQGDIYTKDNVPKQANRKYFWRIYSGGQLQNFLDGYDVHRSNWMR
YVNPARSLPEQNLVACQNGRDIYFYTIRPVEPKQELLVWYSREFAQRLCSQQDDIKQKYM
SADEDHEPEYTKHLPQQTWLKERMREDMKEERDDEGEEKIDVEMLERDTPPDTPDEQIMD
FSKKVEKEERGERDPEDLGIIPSPQPEHREPSLGLNHPYLPDHHPALSHRNLPLHLHGLY
GHREGLVSSYPLYPQSRPLQPPYQLLPPYGPHYPRFLLPSYSPPFPGMLPSRGSLRYSSY
LGTDGLPYPPIGSPNLLPVSLPYPPSPQGGLKELTPNVSPPRGAPATPELSPLPKTTSQH
QSPEQSSSGCEEAMNLSLTTTKSSTAPRNGPGHKSLPYPLKKQNGKIKYECNICSKTFGQ
LSNLKVHLRVHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNL
KTHLRLHSGEKPYQCKLCSTKFTQYIHLKLHRRLHSSRDRPYRCQLCAQAFFHRFSLRIH
QRTCCLANSNAPVNVHMKEMVERFDASQEADTLTETASAPQVGEAVERWLARTLEGEGKE
DQKEATILLKALTAAINAPTMPMVQPVVPASHHSPPLAYQERASVVHLHKRPTVKTEGQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggatagcacaccaggagacatgagcgggtggagggaggtggacttcgccctc
aactgcacctacattgtaccagaccaggtgtcggaccccagtttcagcttgcccaaagcc
atgacctccatcccacgcaatctcaccttcgaatacggcacagacaacgaggtgacaggt
gtgttcagcaaagagtacattcctaaggggactcggtttggtcccctgcaaggagacatc
tacaccaaagacaacgtacccaaacaggccaacagaaaatacttctggaggatttacagc
ggtggccagcttcaaaacttccttgatggctatgacgtccacaggagcaactggatgcgt
tacgtcaacccagcccgctcactgcccgaacagaaccttgtggcgtgccagaacggccga
gacatctacttctacaccatccggccggtggagcccaagcaggagctgctggtctggtac
agccgggagttcgcccagaggctctgcagccaacaggacgacatcaaacagaaatacatg
agtgctgatgaagaccacgagccagagtacactaagcacctacctcagcagacatggctc
aaagagagaatgagggaagacatgaaagaagagagggatgacgaaggagaggagaagatt
gatgtggagatgttggagagggacactccgcccgacacccctgacgagcagatcatggac
ttcagcaaaaaggttgagaaggaggagaggggcgaaagggatccagaggacctggggatc
attccttcccctcagcctgaacacagagaacccagcctgggcttaaatcacccatattta
ccagatcaccatccggcactctcacacagaaatctcccccttcatctccacggcctctac
gggcacagggaagggctagtgtcatcttaccctctttacccccagtccagacccctccag
cccccctaccagcttcttcccccctacggcccgcactatcctcgcttcctcctcccctcg
tactcccctccctttcctgggatgctgccctcaagaggatccctccgatacagcagctat
ctgggcacagacggactcccatacccacctatcggctcacctaatctacttccagtgtcc
ctcccctaccctccgtctccacagggaggtctgaaagaactaacgccaaatgtatcacca
ccacgaggcgccccagccactccagagctctcccctctccccaagaccaccagccaacat
cagtcccctgagcagtcttcctctggctgcgaggaggccatgaacctgagcctgactaca
accaaaagcagcacagcgcctcgcaacggccctggccacaaatccctgccctacccactg
aagaagcagaatggaaagatcaagtacgaatgcaatatctgctcaaagaccttcggacaa
ctgtcaaatctcaaggtccatctccgagtgcacagtggtgagagaccgttccagtgtaac
ttgtgtaaaaagagcttcactcagctggcccacctccagaaacatcacctggtccacacg
ggggagaaaccgcatgaatgccaggtgtgtcacaaacgcttcagtagcaccagcaatttg
aaaacacacctgcgactccactctggagaaaaaccttatcagtgcaagctgtgcagcacc
aaattcacccaatacatccacctcaaactgcaccgccgcctccacagcagccgcgaccgc
ccctaccgctgccagctctgcgcccaggccttcttccaccgcttctccctccgcatccac
cagcgcacctgctgcctggctaactccaacgctcctgtcaacgtgcacatgaaagagatg
gtggagcggtttgacgcaagccaggaggccgacacgctcacagaaacggcatctgcacca
caggtgggggaagctgttgagcgttggttggctcgtaccttggagggtgaagggaaggag
gatcagaaggaggcaaccatactgctgaaagccctgacagcagctattaacgcaccaaca
atgcccatggtccaaccagtggtacctgcatcacatcacagccctccgttggcctatcag
gagagggccagtgttgtccatctccacaaacggccaacagtgaagacagagggacagtga
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