Seriola dumerili (greater amberjack): 111223438
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Entry
111223438 CDS
T05606
Symbol
tp53bp1
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111223438 (tp53bp1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
Tudor_3
DUF4537
BRCT
Tudor_2
SH3_Hsr9
Motif
Other DBs
NCBI-GeneID:
111223438
NCBI-ProteinID:
XP_022603313
LinkDB
All DBs
Position
Unknown
AA seq
1751 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTARSPVL
ELISSPLGSRCSQTDSQSESSQSNNLAEPGILTAANPSSAFQEESQLLDICPPANKKKCA
PEDTDMDSGADSTTHCIQSEEGTSQFGFLELSQSQDLRGEEVNSQEDMTPQPDSERCTKS
AEQNISSRTSASQDSKSVRSEVSSSSSSDSPGQSGRQLSVQVLLHSQGFQASGEQDRQDS
EILSSQEDLFDADKTGAAVDSTVSEPEQQGHPTPTPAHTLRLLHLSGQGSLVQESLSQSS
VDYVAPTPDNFTHTPLIVPSSPTGPENERGADEPMDTSLPPEDRAGDREEQPMETETASK
PHPSASTPVSQNSPGFVLERNISLPSQPDFSHDVFVPTQSLEAPQQSEKKSTSLPRETPS
QHLESTPFSLPLQLSENTERCSPAQQTPEQIQEDSQATQIEELEEPPGVDTSDSVISRCD
QRSESNGAPSQSQTATSSKASTSAVSPKHHSECAKAEQTNLSQKSDVHKKTATSLNVQNV
NVKDSKSDCKEVSSADAVSCSQPRLDASDLTVNSCVQETPSDTTPCSLPSQSMISQTSAV
DVVKSSVDVRGGGTAKSQSVESQQCGKVGNSQTDKDVMDACEQDDVEEEEVVMEEEEEES
AGGGGASGMALALSQSQLLSPEPMEEDSEDGGADSVIVVTDSERDSQIQKKDVTPQSXEH
QPIRDSVSASTNGHESRPQTKEANAAPDRFSQTEKAGPEPEGLKDKSLSDSSGEISFHFT
LPKEGELIGPAVGATPPLINQLKQTLRHSTPIEITSFSEKSDMVGDVSADVAMAASDIVS
GESGEDTAEKGDGKLSLRMKLVTPVEEGSSERFSLQKPTLSEEDGSVVKVTTVSKAVTSS
PSVFSRVRQVHRQQEAEEDSHPAGNSTPVRGELFASPQRSSQASSGGCNSLPNSQSEPSQ
KEILAAPQQKPINTPTPAEPSEERRGPAEVSEPPTPNRTDARQRVVSQQNSDNTITSSPS
NKLRQRTVSQQTSFDAPGLRSPAGRGEPESPSFRRTAGPSHCRHVRTIQEVRTTITRIIT
DVYYEDGKEVERKVTEESEEPVVDCHVLDSDISPCRTGSSSVNSGDLADISSLSSKASSL
QHSSGGTSSSTGLTRPDFIMPPSRGARSFSPRRGGGHQQRGHRGQRAGSVITKGRGYGTL
GSRGFVPLTPRGRARRGRPPSRSSLSRGGGVGPLHRLGAHGQPQSSSEDEPYTRMLPPRL
PISSTDAELPSHSDSLRSSPEEASLAGSSFVGLRVVAKWSSNGYFYSGRIIKDAGEGRFR
LRFDDGYECEVVGKDILLCDPIPLETEVTALLEDEYFSIGVVRGHKTEGQELFYSVERDG
QRQWYNRTSVILSLEQGNKLREQHSLGPYEPSTPLTKASDISLDNLVEGKRRRRVAPGGQ
NTPNRSSSSSPRTPGPSGKRKLMTSEDNRTPAKRGRRGPGARAAQRVGVCNTSGSGTDLP
GQSCGVAETHGPLPQNTSLFMGFAFMLTASSEIDRLTNKLTCDEDEEDYIQTGPYNKAYT
ESQLLAGGGFILPDFNEEQCKAAYQSLLIADQHCRTRKYLLCLASGVPCVSHIWVRDCCK
ENKLLNYRNYLLPAGVGLDDAVVEWHPRSSPFKALRVLLVFEKPVELWAQLITMGGGSSV
RHFQGDKDSSDIPAGKYDVVVTDHACPPLVEKNVTSQEVPLVSPEWLIQSVISGERVGFH
SKPQYHHDYSS
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggtggaagtgaactggactccagcctgcctcaacccgagaacccttgtctg
atcgtggaggactctcagccggacagcgtcgctttggaggacgaccccgagagcagctac
cgagctttgttggcccgtcgcctgtccagcctgcagcccaccgcccgcagcccagttctg
gagctgatatcttcaccactaggaagcagatgctctcagactgacagccaatcagagagc
tcccagagtaacaacctagctgaacccgggatcctcacggcagccaacccgagttcagcg
ttccaggaggagagtcaacttctggacatctgccctcctgcaaacaaaaagaagtgtgca
ccagaggacactgatatggattctggcgctgactctaccacgcactgcattcagtctgag
gaggggacctctcagtttggttttcttgagctttctcagagtcaggatctgcgtggagaa
gaggtgaacagtcaggaggacatgactcctcagccagacagcgagagatgcaccaaatca
gcagagcagaacatcagctccaggacttcagcgagtcaggacagcaagtctgtgagatct
gaggtgagctccagcagctcctctgactctccgggtcagtcgggcaggcagctgagtgtc
caggttctgctgcactcgcagggtttccaggcctctggtgagcaggaccggcaggactct
gagatcctgtcctcgcaggaggacctgttcgacgctgacaagacaggggctgcggtcgac
agcacagtgtccgagccagagcagcagggtcaccccaccccgacacctgcccacaccctg
cgactgctgcatctctctggacagggatcactggtgcaggaaagtctgtcccagagctcg
gtcgattatgtcgctccaaccccagacaacttcacccacactcccttaattgttccaagc
tcgccgaccggaccggagaatgaacgtggtgctgatgaaccgatggatacttcgttgccc
ccagaagatcgagcaggggacagggaggaacagccgatggaaacggagaccgcctctaag
ccacacccatccgcttctacgcctgtatcccagaattcccctggttttgtgttggagcgt
aatatctctttaccctcccagccagatttctctcatgacgtgtttgtcccaacacagagc
ctggaggccccacagcagtcggagaagaagtcgacatcgttgcctcgtgagacaccgtct
caacatctggagtcgactcctttcagtttgcctttgcagctctctgagaacacggagagg
tgtagtccagctcagcagaccccagaacagattcaagaggacagtcaggccacgcagatc
gaggaattggaagagccgcccggcgtcgacaccagtgactctgtgatttcacgctgcgat
cagaggagcgagagcaacggcgccccctcacaatcacaaaccgccaccagttcgaaagct
tccacctctgctgtatcaccaaagcatcacagcgaatgtgccaaggctgagcagaccaat
ctgtcgcaaaagtccgacgtgcacaaaaagacagcaacttctctgaatgtacaaaatgtg
aatgtaaaagacagtaagagtgactgcaaagaggtgagctctgctgacgcggtgtcctgc
tctcagccgaggcttgatgcctctgatctgactgttaacagctgtgtgcaggagacgccc
tcagacactacaccctgcagtctgccctcacagtccatgatctctcagacatctgctgtg
gatgtggtgaagagttctgtggatgtaagaggagggggaactgcaaagagtcagtctgta
gaatcacagcagtgtggaaaggttggtaacagccagacggacaaagacgtgatggatgcg
tgtgagcaggatgacgtagaagaggaagaggtggtgatggaggaggaagaggaggagagt
gcagggggaggcggggcttcaggaatggctctggctctttcccagagccagctgttgtct
cctgagcccatggaggaggacagtgaagacgggggagcggacagcgtcatcgtggtgaca
gacagcgagagagactcccagattcagaagaaagacgtgacgccacagtcanaagaacac
cagccaatcagagattctgtctccgcctccaccaacggccacgagtcccggcctcagacg
aaggaggcgaacgcggctcctgataggttctcccagactgagaaggcggggcctgaacca
gaggggctcaaagacaagagtctcagtgatagttctggagaaatttccttccacttcaca
cttcccaaagaaggggagctgattggtcctgctgttggtgccacaccccctctgatcaac
cagctgaagcagacgctgagacacagcactcccattgagatcacttccttctctgaaaag
tcagacatggtgggtgacgtctctgcggatgtggcgatggctgccagtgacatcgtgtcg
ggggagagcggcgaggacacggcggagaagggggacgggaagctgagtttgaggatgaag
ctggtgacccccgttgaagagggcagctcggagcgcttcagcctgcagaagccaacacta
tcagaggaggatggatctgtcgtcaaggttaccactgtttccaaggctgtaaccagcagc
ccgtcggtgtttagtcgagtcaggcaggtgcacagacagcaggaggcagaggaggacagc
catcccgcaggcaactctacacctgtcaggggggagctgttcgcctcaccacagagaagt
tcccaggcgtcctcaggcggatgcaacagcctccctaacagccaatcagagccttcgcag
aaggaaatattggcagcgccgcagcagaagcccataaatactcccacccctgccgagccg
tctgaagagaggcgaggaccggcagaagtttcagagcctcccaccccgaacaggacagac
gcccggcagagggtggtttcacagcagaactctgacaacaccatcacctccagtccgtcc
aacaagctccgtcagcggacagtctcccagcagaccagcttcgacgccccggggctgcgc
tccccagctggcaggggtgaaccagagtctccgtccttcagaagaaccgcaggcccctcc
cactgcagacacgtgcgcaccatccaggaagtgcggaccaccatcacgcggatcatcaca
gatgtgtattacgaggacggcaaagaggtggagcgcaaagtcacagaggagagcgaggag
ccagtggtggactgccacgtgttggacagcgacatctctccatgccgcacgggcagcagc
tccgtgaactccggtgacctggctgacatcagctctctgtcgtccaaggcctccagcctg
cagcacagctcaggaggaaccagtagcagcaccggtctcaccaggccggacttcatcatg
ccgcccagccgaggggcccgatccttcagtcccaggaggggaggtgggcatcaacagagg
ggtcacaggggtcaaagggcagggtcagtgatcacaaagggcagaggctacggcaccctt
gggtcccggggcttcgtcccactgactcccagaggaagggctagaaggggccgacctccg
tcccgctcctccctgtccaggggaggtggcgttggtccgttgcacagacttggtgctcat
ggccagccacagtcctcctcagaggacgagccctacacccgcatgctccccccacgcctc
cccatcagctccacagacgccgagctccccagccactccgactccctcaggtcgtcgccg
gaggaggcgagcctggccggcagcagcttcgtcggcctgcgggtggtggccaagtggtcg
tccaacggctacttctactcgggccgcatcatcaaagacgccggggagggcaggttccgc
ctgcgattcgacgacggttacgaatgcgaggtggtggggaaggacatcctgctgtgtgat
cccattcccctggagacggaggtcaccgctctgctagaggacgagtacttcagcataggt
gttgtgaggggccataaaacagagggccaggagctgttctacagcgtggagcgggacggc
cagaggcagtggtacaacaggacctcggtcatcctctctctggagcagggcaacaagctg
agggagcagcacagcctcgggccctacgagccctccactcccctcaccaaggcctccgac
atcagtctggataacctggtggaggggaagaggaggcgcagagtggcccccggaggtcag
aatactcccaaccgcagctcctccagcagcccccgtacccccggcccctccggcaagagg
aagctgatgacctctgaggacaacaggacgccggccaagagaggccgcaggggtccaggc
gccagagccgctcagcgggtcggtgtgtgtaacacctccggcagcggcacagatctcccc
ggtcagtcgtgtggcgtggcggagactcacggcccgctgccccagaacacgtctctcttc
atgggcttcgcgttcatgctaacggcctcgtcggagatcgaccggctgaccaacaaactc
acctgcgatgaggatgaggaggattacattcagacaggtccatacaacaaggcatacaca
gagtcccagctgctggcaggtggaggcttcatcctgcctgacttcaatgaagaacagtgt
aaggcagcgtaccagagcctgctcattgcagaccagcactgccgtaccaggaagtacctg
ttgtgtttggccagcggcgtgccgtgcgtgtcacatatttgggtgcgagactgctgcaaa
gagaacaagctgctcaactacaggaattacctgctgcctgccggtgtggggctggacgac
gccgtagtagaatggcatccccgcagcagtccattcaaagccctgcgggtccttctagtg
tttgagaagccagtggagctctgggcccagctgatcaccatgggtggaggctcctccgtc
cgacacttccagggagacaaggacagctcagacattcctgctggcaagtacgacgttgtg
gtgacagaccatgcctgtccaccactggtagagaaaaatgtgacatcgcaggaagtcccg
ctggtgtctcctgagtggctcattcagagtgtcatcagtggggagcgcgtgggtttccac
agcaagcctcagtatcaccacgactactcgtcctaa
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integrated database retrieval system
