Seriola dumerili (greater amberjack): 111223540
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Entry
111223540 CDS
T05606
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecules
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111223540 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111223540 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sdu00535
]
111223540 (sdc3)
Proteoglycans [BR:
sdu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
111223540 (sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
111223540
NCBI-ProteinID:
XP_022603451
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MKLPWLLSLTALLAHAATGQTWSSPSIDDEGSTRDEFYDDEDLYSGSGSGFPEISMRPTS
AGVSFTTEEPLLLSTTQATSPAPSASPAAEPSPNPEDPTATPLPTEADGESGAFWEKELE
KEKERERELETERQRELERERAKQLEREREREREKERVREMEREKEREREKEREREREKE
RERQRERELERERELERIRAAAAAQTTTAPRSPASAPVVTTNPATSPAESAAPSAGSDDL
STTEEEEEEDVYLSPEPTSFYPGFDIETTTEEDTPTTAETTPEATTAAPTTTTTVKTRVP
FRPKVPMTTATQVMPTGRTTRPQQPTTTQESNNEVGAAGPSGDFEIREDRRNDLGRGVMP
GDPDLVGNTVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKD
EGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctgttgtcgctcacggcgctgcttgctcacgccgccacgggacag
acgtggtcgtcgccgtctatcgatgacgaaggctcaacgagagacgagttctacgatgat
gaggacctctactcaggctcaggctctggctttcccgagatcagtatgaggccgacgtca
gcgggcgtgtccttcaccacagaagagcccctactcctctccaccactcaggccactagc
cccgccccctccgcctcacctgcggctgagcccagccccaaccccgaggaccccaccgcc
accccgttgcccaccgaggccgacggagagagcggtgcattctgggagaaagagctagag
aaggagaaagagagagagagggagctggagacagagaggcagagggaactggagagggag
agggcgaagcagttggagagggagagagagagggagagagagaaggaacgggtcagagag
atggagagggagaaagagcgcgagcgagagaaggaacgcgagagagagcgagagaaagag
agagagaggcagagagagcgtgagcttgaaagagagagagagctcgagcgaatcagggcc
gctgctgccgcccagaccaccaccgccccgaggtcacctgcttccgctcctgtggtgacc
accaaccctgcaaccagccctgcagaaagtgcagcaccctctgctggttcggatgacctg
agcaccacagaagaagaagaagaagaggacgtctacctgtcacctgagcccacctcgttt
tacccgggctttgacatagaaaccaccacagaagaagacacacccaccacagcagagacc
acacctgaagccacaacagcagctcctaccaccaccaccactgtcaagaccagggtcccc
ttcaggcccaaggttcccatgacgacagccacccaggtgatgccaacagggagaacgacc
cgcccacagcagcccacgactacacaggagagtaacaacgaggtgggcgctgcaggacca
agtggagatttcgaaatccgtgaggatcgccgcaatgaccttggtcgcggtgtaatgcca
ggagatcctgatctggtcggcaacacagtggacggaggaagctctgccgcccagctgcca
cagaagaacatcttggagagaaaagaggtcttgatagcggtgatagttggaggcgtggta
ggcgccttgttcgccgccttcctggtgatgctgctggtgtacaggatgaagaagaaggat
gagggcagctacacgctggaggaacccaaacaggccaccgtcacttaccagaaaccagac
aagcaggaagagttttacgcataa
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