KEGG   Seriola dumerili (greater amberjack): 111223566
Entry
111223566         CDS       T05606                                 
Name
(RefSeq) ras-related protein Rab-1B
  KO
K07874  Ras-related protein Rab-1A
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111223566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111223566
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111223566
   04031 GTP-binding proteins [BR:sdu04031]
    111223566
Membrane trafficking [BR:sdu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    111223566
 Autophagy
  Other autophagy associated proteins
    111223566
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111223566
  Exosomal proteins of other body fluids (saliva and urine)
   111223566
  Exosomal proteins of colorectal cancer cells
   111223566
GTP-binding proteins [BR:sdu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    111223566
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA_7 ABC_tran AAA_22 LANC_like AAA_29 PduV-EutP AAA_16 CRAL_TRIO_2 AAA_5 Dioxygenase_N TniB
Other DBs
NCBI-GeneID: 111223566
NCBI-ProteinID: XP_022603476
UniProt: A0A3B4TJH9
LinkDB
Position
Unknown
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTCGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAG
GDKPNLKIESTPVRQSGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaatcctgaatatgactatctgttcaagctcctgctcatcggagactctggagtagga
aagtcctgtcttctgctccgttttgcagacgacacctacacagagagctacatcagcacc
atcggagtggatttcaagatccgcaccattgagctggacggcaagaccatcaaactgcag
atttgggacacctgtggtcaagaaaggtttcgtaccatcacctccagttactaccgtgga
gcccacggcatcatagttgtatatgatgtgacagatcaggagtcctacaacaacgtgaag
cagtggcttcaggaaatcgaccgctatgccagcgaaaacgtcaacaagctgctggtggga
aacaagtgcgacctgaccaccaagaaggtggtggactacacaacagccaaggagtttgct
gactccttggcgatcccgttcctggagacgagcgccaagaacgccaccaacgtggagcag
gccttcatgaccatggctgcagagatcaagaagcgcatgggccccggggccacggccggc
ggcgacaagcccaacttaaaaatcgagagcacccccgtcaggcagtctggagggggctgc
tgttaa

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