Seriola dumerili (greater amberjack): 111223646
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Entry
111223646 CDS
T05606
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111223646 (sh3tc1)
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111223646 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
SH3_1
TPR_10
TPR_7
TPR_NPHP3
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
111223646
NCBI-ProteinID:
XP_022603608
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MDAVSVKGTPSTCEENVPAALPVQLELVRGPERLPADDQLKEMLRGKLRVLQVDSTKVNA
LFMELSAHVISINSEEKVIYVRFKTFEEIWKFTTYYTTGFLGQCMESLLLDQTFWLSSLE
DDVAIEVSIQEETLNLIYKRILMQEGSLFASCSANQMFDSSISGGDLYLEQGDIAQFEPP
FMGSGWTVLCLADGARGTAPKPALEPVIPFHQWFLKSCSESILVGDGKPACDFPLQFARG
TCVATEEYDAEGPDELSMELGDRIIIVGLLVSCFDWFTGRKEATGEVGLVKTSLVKPSTD
ICDSADIFLEKEDGTFFSLQEDRVIEETTALLKKRSQEDTGHNYKLDVISCQDSEKKPLI
SCLSEAETQQTELKMNIQRLLDQGKDSAPDLTVTMKRSLEDSVPSTEAEDPSPPRFTVHP
IVEGNNNTESFIPLFSFLEGQLYKAEFGVLYGLNSELLTSSTFSGHSDEDQLIAFLAVAR
ETARKKRLFWSQTRLCFLLGKLCAGRSKFSQARVYFEEALSVPREGFRDLKLLASIYSNL
AAIYLLQKNTDNFFAVTQRLVALILGIPDCLQSLEDNSALKYILKKAVLSHNRRAEARAC
YLLAKHHWTHADGAQAVPYLERLLVLCAEAQRTWSISLSHGYLSLGKLYSQLCLPHLSVS
SARRASLQPSAQLSDCLHSMGLVLDNVHKLNGITEQDVSVPPQVAPFLHQALSFTKFQGG
GKNQHHTLFHQLTVCLCQLFYKHRMVGHAIHHMHRLINNSPPLQQVPISVPERNSALIWL
AWLHIDDQQPGVALDILDSVLSSMPEHCTTPLEGVVLNMRGVALRCMGDLQRAAESYQAA
VDICQEYEDLPNWAVAQANLGLLCLKAGARGLAQRHLTEAVQLFSELDSDGHEANFITVL
LKLGQLYVTQQQVHYGKGCYEWALLLAINANLLDCQLTATRDLCCLYGSESPDQAQCIIY
NQHQVQLLRRTGDRAQEGDALEAVSQLYLTLGTERAYRAALDYTKSSLGIFIDLGCREKE
AYGWLQAGKIYHLLGQTELVDLYVQVAQDVALSIGDTGFILKLLEAAGDIFFNSCQDRDK
AITFYRDRALPIAVKSGSVHTRLRLCNKLTEVMLSLQLYGDAVEFAQTALDISITQGECL
NERVAYHRLASLYHRLEQYELAEHHYLKTLTLCPAPLQFDEETLYYVRVYQTLGDIIFYD
LKDPFDAAGYYHLALAAAMDLGNKRSQLQLCTRLATIYHNFLIDRDLSLFFYQKARGFAA
ELNVRRINISPDQLHRSISQDKATGKFSN
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtcagtgtgaagggaactccgtcaacatgtgaggagaacgtcccggcagct
ctgcctgtgcagctggagctggtcagaggtcctgagcgtcttcctgcagacgaccagtta
aaggaaatgttgagagggaaactgcgtgttctgcaggtcgacagcaccaaggtcaacgct
ctcttcatggagctgtctgctcacgtcatctccatcaacagtgaagaaaaagttatttat
gtaagattcaaaacatttgaggagatatggaagttcaccacatattacactacaggtttc
ctgggtcagtgtatggagagtttgttgttggaccagacgttctggctcagttctttagag
gacgacgttgctattgaagtttccattcaggaggaaacgctcaaccttatctacaaacgc
atcctcatgcaggagggttcgttgtttgctagttgcagtgccaaccagatgtttgacagc
tccatctctggtggagacctgtacctggagcagggagacatagcccagtttgagcctccc
ttcatgggctcaggttggactgttctctgcctagctgatggagcccggggcactgcaccc
aaacctgctctggagccagtcattccttttcatcagtggtttctcaaatcctgttctgag
agcattttagttggagatggcaaacctgcctgtgacttccctctgcagtttgccaggggc
acctgtgtggccacagaggagtatgatgctgagggcccagatgagctgagcatggaacta
ggtgatcgcatcatcattgtgggactcctggtgtcttgttttgattggttcacagggaga
aaggaggcgacaggagaagtgggtctggtcaagacgagcctagtgaaaccgtccactgac
atttgcgactcagcagatatttttttggagaaagaggacgggacgttcttcagtctgcag
gaggacagagtcatagaggagacgacggctttactgaagaagagatctcaagaagacact
ggtcacaactacaaactggatgttatcagttgccaagactctgagaagaaaccattaatc
agctgtttgagtgaagctgagactcagcagactgagctgaagatgaacattcagaggctt
ctggatcagggaaaagactcagcaccagatctcactgtgactatgaaacggtctttggag
gactcggttccgtctacagaggctgaagacccgagccccccccgtttcaccgttcacccg
attgtagaaggaaacaacaacactgaaagcttcattcccctcttctcttttctggaggga
cagctctacaaagcagagtttggcgtcctgtacggtctcaactctgaactcctcacctcc
tccaccttctctggtcactctgacgaggatcagctgatcgctttccttgctgttgccagg
gaaacagccaggaagaagcgactcttctggtcacagactcgtttgtgcttcctgttgggt
aagctctgcgccgggaggtcaaagttcagccaggctcgggtttactttgaggaagccctc
agcgttccacgagagggcttcagggacctcaagctgttggccagcatctattccaacctg
gccgccatttacctgctgcagaaaaacacagacaacttctttgctgtgactcaacgactc
gttgccttgatcctgggaatcccagactgcctgcagagcttagaggacaattctgctctt
aaatacatcctcaagaaagctgtgctctcccacaacagaagggcagaggcccgggcttgt
tacctgttggcaaagcaccactggacccacgccgatggggctcaagctgtcccctatctt
gagagactacttgttctttgtgctgaagctcaaagaacatggagcatctctctgagtcat
ggatacctcagcctggggaagctctacagtcaactctgcctcccccacctcagcgtcagt
tcagcaaggagagcttctctgcagccgtctgcacagctgagcgactgtcttcacagcatg
ggtctggttctggacaatgtgcacaaactgaatgggatcacggagcaagatgtctctgtc
ccgcctcaagtggcgccatttttacaccaggccctctcattcaccaagttccagggagga
gggaagaaccaacaccacactttgttccatcagctgactgtgtgtctctgccagctgttt
tataagcacagaatggttggccacgccatccaccatatgcatcgcctcatcaacaacagt
ccacctttacagcaagtccccatctctgtgccagagagaaacagcgccctcatctggctg
gcatggcttcacatcgacgaccaacagcctggtgtggctctggacatactggactcggtc
ctgtcttcaatgccagagcactgcacaacccccctggagggtgtggtgctcaacatgcgt
ggtgtggcactccgatgtatgggcgacctccagagggcggcagagagctaccaggctgcc
gtcgacatctgccaagagtatgaggacctgccaaactgggctgtagctcaggctaacctc
gggctgctgtgtctgaaggcgggagctagaggcctggctcagaggcacctgacggaggct
gtgcagctgttctcagagctggattcagacggtcacgaggcgaacttcatcacagtgctg
ctgaagcttgggcagctctacgtgacgcagcagcaggtgcactatgggaaaggatgctac
gagtgggctctgctgctggctatcaacgccaacctgttagactgtcagctgactgcaacc
agagacctgtgctgtctgtacggcagtgagagtccagaccaggcccagtgcatcatctac
aaccagcaccaggtccagctgctgagacgcaccggagacagagcacaggagggggacgca
ctggaggccgtcagccagctctacctcactctgggcacagagagggcgtacagggcagct
ctggactacaccaagagcagtctgggtattttcatcgatctgggctgcagggagaaggag
gcgtacggctggctgcaggccgggaagatctatcacctgctgggccagactgagctggtg
gacctttatgttcaggtagctcaggacgtcgctctgagcatcggagacaccgggttcatc
ctgaagctgctggaagctgcaggagacattttcttcaacagctgccaggacagagacaaa
gccatcaccttctacagggaccgagctctgcccatcgcagtgaagagcggcagcgttcac
accaggctgaggctgtgtaataaactgactgaggtgatgctcagtctccagctgtacggg
gacgctgtggagtttgctcagaccgctctggacatcagcatcactcagggtgagtgtctg
aatgagcgggtggcctaccaccgcctggcctctctctaccaccgcctggagcagtatgaa
cttgctgaacaccattacctgaagaccctgaccctgtgtccagcacctctgcagtttgat
gaggagacactgtactacgtcagggtctaccagacactgggggacatcatcttctacgac
ctgaaggacccgttcgatgctgcaggctactaccacctggctctggctgcagccatggac
ctgggcaacaagaggtctcagctgcagctgtgcacgcgcctcgccaccatctaccacaac
ttcctcatcgaccgggatctgtcactcttcttctaccagaaggcgagaggcttcgctgca
gagctgaacgtgaggaggattaatatctccccagatcagcttcacagaagcatctcacag
gacaaggccaccggaaaattttctaactaa
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