Seriola dumerili (greater amberjack): 111223728 Help Entry 111223728         CDS       T05606                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K06236   collagen type I alpha Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu04510   Focal adhesion sdu04512   ECM-receptor interaction sdu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sdu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111223728  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111223728   09142 Cell motility    04820 Cytoskeleton in muscle cells     111223728  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111223728 Glycosaminoglycan binding proteins [BR:sdu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111223728 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  111223728 NCBI-ProteinID:  XP_022603698 LinkDB All DBs Position Unknown AA seq 1447 aa AA seqDB search MFSFVDLRLALLLSAAVLLVRAQGEDDRTGGSCTLDGQVFADRDVWKPEPCQICVCDSGT VMCDEVICEDTTDCPNPVIPHDECCPICPDDGFQEGQVEGPKGERGPKGDRGLPGPPGND GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGYDEKSPAMPVPGPMGPMGPRGPPGAPGSS GPQGFTGPPGEPGEAGAAGPMGPRGAAGPPGKNGEDGESGKPGRGGERGPSGPQGARGFP GTPGLPGIKGHRGFSGLDGAKGDSGPAGPKGEAGAPGENGTPGAMGPRGLPGERGRTGAN GAAGARGNDGAAGAAGPPGPTGPAGPPGFPGGPGAKGDAGAQGARGGEGPAGARGEPGNP GPAGAAGPAGNPGADGAAGAKGSPGAAGVAGAPGFPGPRGPSGPQGAGGAPGPKGNTGEV GATGAKGEAGAKGEAGVPGVQGPPGPSGEEGKRGARGEPGTAGARGAPGERGAPGGRGFP GSDGAAGPKGATGERGAPGVVGPKGATGEPGRTGESGLPGAKGMTGSPGSPGPDGKTGAA GAPGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEGGKPGERGVMGPTGPVGAPGKDGDV GAQGPAGPAGPAGERGEQGAAGSPGFQGLPGPQGAIGETGKPGEQGLPGEAGAPGPAGAR GDRGFPGERGAPGAIGPAGARGSPGGAGNDGAKGDAGAPGNPGAQGPPGLQGMPGERGSS GLPGLRGDRGDQGAKGVDGAPGKDGPRGLTGPIGLPGPAGATGDKGEPGAAGPVGPSGAR GAPGERGESGPPGPAGFAGPPGADGQPGAKGEAGDNGAKGDAGPPGAAGPTGAPGPQGPA GNTGPKGARGPAGPPGATGFPGAAGRVGPPGPSGNAGPPGPAGPAGKEGQKGNRGETGPA GRPGEIGAAGPPGPSGEKGSAGGEGAPGSAGLPGPQGISGQRGIVGLPGYKGERGFPGLP GPSGEVGKQGPAGPGGERGPPGPMGPPGLAGAPGEPGREGTPGNEGSAGRDGAAGPKGDR GETGPSGAPGAPGPPGAPGPVGPAGKSGDRGETGPAGISGPAGPAGPRGPAGANGLRGDK GETGEAGERGMKGHRGFTGMQGPPGPAGPSGEPGPAGAAGPAGPRGPAGSAGSAGKDGMT GMPGPTGPPGPRGRSGEMGPAGPPGPPGPPGAPGAPGGGFDLGFIAQPQEKAPDPFRMFR ADDANVLRDRDLEVDTTLKSLSQQIEQIRSPDGTRKNPARTCRDLKMCHPDWKSGEYWID PDQGCTQDAIKVYCNMETGETCVTPTQPEVAKKSWYVSKNIKEKKHVWFGEAMNDGFQFE YGSEGSQPEDVNIQLTFLRLMSTEASQNVTYHCKNSVAYMDAAAGNLKKALLLQGSNEIE IRAEGNSRFTYSVLEDGCTSHTGTWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEFGLE VGPVCFL NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatttgcggctggcgctgctgctcagcgcagcagtgcttctggtc agagcgcagggcgaggacgaccgcacaggcggaagttgcaccctggacggccaggtgttt gcggaccgggatgtgtggaagccggagccatgtcagatctgtgtgtgcgacagcggcacg gtgatgtgcgatgaggtcatctgcgaggacacaacagactgccccaaccccgtcatcccc catgacgagtgctgccccatctgccccgacgacggcttccaggagggtcaagttgaggga cccaagggagagcgtggacccaagggagacagaggtcttcctggtccccctggtaacgat ggtatccctggccagcccggtctgcctggacctcccggcccccctggacctcccggcctc ggtggaaacttctcccctcagatgtctggtggctatgatgagaaatcacctgccatgcct gtgcccggacccatgggcccaatgggaccccgtggaccccctggagctcccggatctagc ggacctcagggattcactggcccccctggtgagcctggtgaggctggagctgctggtccc atgggtccccgtggagccgcaggcccccctggaaagaacggagaggatggtgagtctggc aaacccggtcgtggtggtgagcgtggaccttctggcccacagggagctcgtggtttcccc ggaacccctggactccccggaatcaagggacacagaggattcagcggtctggatggagct aagggagacagtggccctgctggacccaagggagaggctggagctcctggtgagaatgga acccctggtgctatgggacctcgtggtctgcctggtgagagaggccgcactggtgctaat ggagctgctggagctcgtggtaacgatggtgctgctggtgctgccggacctcccggtccc actggccctgctggaccccctggattccctggtggccctggagccaagggtgacgccgga gctcagggtgctcgtggaggtgagggccccgctggagcccgtggtgagcccggaaaccct ggacctgctggcgctgccggacctgctggaaaccccggagctgatggagccgccggagct aagggatcccctggtgctgctggagttgctggagctcccggtttccccggaccccgtgga ccctcaggacctcagggtgctggtggtgcccccggacccaagggtaacactggtgaggtt ggtgccacaggagccaagggagaggccggtgccaagggagaggctggtgtcccaggagtt caaggacccccaggaccttccggtgaggagggcaagagaggagccagaggagagcctggt actgcaggagcccgtggagcccctggagagcgtggtgcccctggtggtcgtggtttccct ggttctgatggtgctgctggacccaaaggtgccaccggtgagcgtggtgcccctggtgtt gttggacctaaaggtgccactggtgagcctggccgcactggcgagtctggtctgcctgga gctaagggtatgactggtagccctggcagccctggacctgatggcaagactggagctgct ggagcccctggacaagatggccgccccggaccccctggccccgttggagctagaggccag cctggagtcatgggattccccggacccaagggagccgctggtgagggtggaaagcccggt gagagaggagtgatgggacccactggccccgttggtgcccccggaaaggacggtgacgtt ggtgctcagggtcccgctggacctgctggccccgctggtgagagaggagagcaaggagct gccggatctcctggattccagggtcttccaggaccccagggtgccattggtgagactggc aagcccggagagcagggtctgcccggtgaggctggagcccctggacctgctggagctaga ggtgacagaggattccctggtgagcgcggtgcccctggcgctattggacctgctggtgct cgtggatcccctggtggtgctggaaacgatggtgctaagggagatgctggagcccctggt aatcctggtgctcagggtcctcctggactgcagggcatgcctggtgagcgcggttctagt ggtcttccaggactgaggggagacagaggtgaccaaggagctaagggtgttgatggagct cctggtaaggatggtccccgtggtttgactggacctattggacttcccggacctgctgga gccaccggagacaagggagagcctggtgccgctggacctgtcggaccttctggagctcgt ggagcccctggtgagcgtggagagtctggaccacccggacccgctggattcgctggacct cctggtgctgatggacagcctggtgccaagggagaggctggagacaatggtgctaaggga gatgctggtccccccggcgctgctggacccactggtgcccctggacctcagggtcccgct ggaaacactggccccaagggagcccgcggacctgctggacctcctggtgctactggcttc cctggtgctgctggcagagttggacctcctggcccctctggcaacgctggacctcccgga cccgctggacccgctggcaaggagggacagaaaggaaaccgtggtgagactggacctgct ggtcgccctggtgagattggtgctgctggacccccaggaccttctggagagaagggtagc gccggtggtgagggtgcccctggtagcgctggtctgcctggacctcagggtatttctgga cagcgtggtattgttggtctgcccggatataaaggagagagaggtttccctggcctgcct ggaccctccggagaggttggaaagcaaggacctgctggacccggtggtgagcgtggacct cctggacccatgggaccccctggactggctggagcccccggtgagcctggacgtgaggga acccccggaaacgagggatcagctggtcgcgatggagccgctggacccaagggagaccgt ggagagaccggaccttctggagcacctggtgcccctggaccccctggtgcccctggacct gttggacccgctggaaagagtggtgaccgtggagagactggacctgctggcatttctggc cctgctggccctgctggacctcgtggccctgctggagctaatggacttcgtggagacaag ggagagaccggagaggctggagagagaggcatgaagggacacagaggattcactggcatg cagggacctcccggacctgctggaccctcaggagagccaggacccgctggtgctgctgga cccgctggacctagaggccctgctggatctgctggctctgctggtaaggacggtatgact ggtatgcccggacctactggaccccctggacctcgtggacgttctggagagatgggacct gctggacctcctggacctcctggtcctcctggagcacctggtgcccctggtggcggattc gaccttggcttcatcgcccagccacaggagaaggcccccgatcccttccgcatgttccgc gctgatgacgctaacgttctccgcgaccgcgacctggaggttgacaccaccctgaagagc ctcagccagcagatcgagcagatccgcagccccgacggaacccgcaagaaccccgccaga acctgccgtgacctcaagatgtgccaccctgactggaagagcggtgagtactggattgac cctgaccagggctgcactcaggatgccatcaaggtctactgcaacatggagactggagag acctgcgtaaccccaactcagcccgaggttgccaagaagagctggtacgtcagcaagaac atcaaggagaagaagcacgtctggttcggagaggccatgaacgacggcttccagttcgag tacggcagcgagggctctcagccagaggatgtcaacatccagctgaccttcctgcgtctc atgtccaccgaggcatcccagaacgtcacctaccactgcaagaacagcgtcgcttacatg gacgccgccgctggcaacctcaagaaggccctgctcctccagggctccaacgagatcgag atcagagccgagggcaacagccgcttcacctacagcgtcctggaggatggatgcacgtca cacaccggtacatggggcaagacagtcatcgactacaagacatcgaaaacatctcgcctg cccatcattgatatcgctcctatggacgttggtgctccagaccaagagtttggccttgaa gttggacccgtctgtttcttgtaa

DBGET integrated database retrieval system