Seriola dumerili (greater amberjack): 111223730
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Entry
111223730 CDS
T05606
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111223730 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111223730 (hdac5)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111223730 (hdac5)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111223730 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
111223730
NCBI-ProteinID:
XP_022603700
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MLLRPTVSGLCAMLQTIYETESCFSSASTDSHHQPLELLSGNRGSSTAMPTTVEVKSSFP
SGMQSPVGAASEHRGGGGGEGGGGGSPVDLRTEPRVGSLSGGAAAVDTTLREQQLQQELV
LLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKQQQELLAAKRQQELEQKRKLEQQ
RHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPGGLNHSFSPKC
WGAQHTSLEQSSPPQSNTPGTPPSYKLPPLLGNYESKDDFPLRKTVSEPNLKVRSRLKQK
VAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNSAPGSGPSSPNSSNTAIANGNTGSV
PNIQTEQLRSLHQTLGADGTLSPLSLYTSPSLPNISLGLPANTHITAPQKLSTQQEAERQ
AIQSLRGGGALTGKFLSTSSLPAGNSHSAHSSLLQHVLLLEQARQQTAMLAVPMYSQSPL
VTAERGVSSGMRAVNKLPRHRPLARTQSAPLPQSPQALQQLVVQQQHQHFLEKHYKMLSK
GTDLPRPPPTHPEETEEELTETNDMQEDDGGVGPHRLQKEGSDDSTPSSERLGVHLKGES
TESELDEEEEDEEVIQLREGDEEERGSYSQVCVKTPLQQLGVFQSSLPHRPLGRAQSSPA
TTVNPIKHLFTTGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIR
GRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTV
WNEMHSSAAVRMAVGSVIELAFRVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAIT
AKLLQQKLGVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDNGNFFPGSGAPEEVG
SGAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPIAQQFSPDVVLVSAGFDAVEGHQS
PLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTAICDASEACVSALLGDAVRRGV
TLSSIIIHEKPCPKACASLERVIEIQSKHWSCLQSLSQTSGHSLLDCPLGAKGQSEKDEA
DTVSAMASLSVDVEQPGSVPDNSETSRSTEEPMEEEPVL
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcgtcccacagtgtcaggattgtgcgccatgttgcagaccatctatgagact
gagtcctgtttttcctctgctagcacagacagccaccaccagcctctggagctcctgagt
ggcaacaggggctccagcactgccatgcccaccactgtggaggtgaagagcagcttccca
tcgggcatgcagagcccagtaggagcagcgagcgagcacagaggaggaggaggtggagaa
ggaggtggaggaggaagccctgtggacctgcggacagaacccagggtggggtctctgtct
gggggtgcggcggcggtggacacgaccctgagagagcagcagctccagcaggaactggtg
cttctcaaacagcagcaggagctccagaaacagctgctgtttgcagagttccagaaaaaa
cacgaagtgctaacaagacaacatgaagtccagctgcaggagcacctgaagcaacaacag
gagctgctggcagcaaagcggcagcaggagctggaacagaagaggaaactggagcaacaa
agacatgaagagcaggagaaacagaggctggagcaacaactgctgctgctgaggaacaag
gagaaaggaaaagagagtgccattgccagtactgaggtgaagctgaagctccaggagttc
cttctcagtaagaaagagcctggtcctggtggactgaaccattccttctccccaaagtgc
tggggagcccagcacacctctctggagcagagctctcctccgcagagtaacacaccagga
actcctccctcctacaaactgcccccactgctggggaactatgagagcaaagatgatttc
ccactccgcaagacagtctccgagcctaacctgaaggtgcgttcgcggttgaagcagaag
gtggcagagaggcggagctctccacttctccgcaggaaggatggaactgtcatcagcacc
tttaagaagagagccatagagatatcagtctcctctctctgtaatagcgctccaggttca
ggtcccagcagtcccaacagttccaatacagccatcgccaatggcaacacaggatctgtc
cctaacatacagactgagcaactgagatctctccatcaaacgctgggggctgatgggaca
ttgagtcctctgagtctctacacctcgccctcgctgccaaatatttccctggggctccct
gcgaacacacacatcacggccccccagaagctgtctacccagcaggaggccgagcgtcaa
gccatccaatcattgcgaggcggcggagctctgacggggaagtttctctccacatcctcc
ctacctgcaggtaactctcactctgcccattcctcgttactgcaacatgtactactactg
gagcaggccagacaacagacggctatgctagctgtccccatgtacagccagtcgccattg
gttacagcagagagaggcgtgtccagtggcatgcgggcagtcaacaagctgcctcgccat
cgcccactggctcgtacccagagtgcacctttgccccagtccccccaggcccttcagcag
ctggtggttcaacagcaacaccagcacttcctggaaaaacactacaagatgctatcgaag
gggactgatcttccaaggccaccacccacccacccagaggagacagaggaggagctaaca
gagaccaatgacatgcaggaagatgacggaggggtgggccctcacagacttcagaaggag
gggtcagatgacagcacaccctcctctgagcgacttggtgtgcacttgaagggggagagt
accgagagtgagctggacgaagaggaagaggatgaagaagtcatccagctgagggagggc
gacgaagaggagagggggagctattcgcaggtttgtgtgaaaacacccttgcagcagttg
ggtgtattccagtcctccctgccccacagacctctgggaagagcgcagtcctcccctgca
accacggtcaatcccatcaaacacctctttactactgggcttgtgtatgacagtctgatg
ttgaagcatcagtgtgtgtgtggcaatgctcacatccacccagagcatgctgggagagtg
cagagcatctggtccagactgcaggagacgggcctgctgggccgctgcgagaggattcgt
gggcgtaaagcgtctctggatgagatccagtctgttcattcagagtttcacactctgctc
tatggaaccagtccgctcaatcgacacaaactggaccacaagaaactgctgggtccaatc
agccagaagatgtacgccgttcttccctgtggaggaataggggtggacagtgacacagtg
tggaatgaaatgcactcatcagcagcggttcgcatggcggttggctcggtcatcgagctg
gccttcagagtggcggcaggggagctgaagaacggcttcgcagtggtgcgtccaccaggt
caccacgctgaggaatccactgccatgggcttttgtttcttcaattcagtagctatcact
gcaaagctgctgcaacagaaactgggagtgggcaagatcctcattgtggattgggacatt
caccatggcaacggcacccagcaggccttctacagtgaccccaacgtcctctacatctct
ctccatcggtacgataatggaaacttctttcctggcagtggagctcctgaagaggtggga
tcaggtgccggtgttggttttaatgtgaacatagcttggaccggaggagtggagccccct
atgggtgatgtggagtaccttactgcctttaggagcgtggtgatgcccatcgcccagcag
ttcagcccagatgtggtcctggtgtctgcaggctttgatgcagttgagggtcatcagtct
cctctgggaggctacaatgtctctgccaagtgctttggtcagctaacgcagctgctgatg
ggactggcaggtgggcgggttgttatggcgctggagggcggtcatgacctcactgccatc
tgtgacgcatcagaggcctgtgtctctgcgcttctgggagacgcggtgagacgcggagtc
acattatcatcgataattattcatgagaagccatgtccaaaagcctgcgcctcactggag
agagtaatagagatccagagtaaacactggtcttgtctccagagtttgtctcagacaagc
ggccactcgttattggattgcccccttggtgctaagggccaatcggagaaggacgaggca
gacacagtcagcgccatggcctccctgagtgttgatgttgagcagccgggctctgttcct
gacaactcagaaaccagcaggtccacagaggagccaatggaagaagagcctgtattgtag
DBGET
integrated database retrieval system
