Seriola dumerili (greater amberjack): 111223749
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Entry
111223749 CDS
T05606
Symbol
samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111223749 (samd4a)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111223749 (samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
111223749
NCBI-ProteinID:
XP_022603734
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MMFRDQVGVLASWFKGWNECEQTVALLSLLKRVSRTQARFLQLCLEHSLAECTELQVLEG
EANNPGVISQWQGEPKERVISLVLTHLPLLKPGNVEAKGEYMRLLPRILAHTIEHGHHLE
ESRQLLSYALIHPATSLEDRAALALWLNHLEERAAARGDSLERPPPAGPHHHHHQSTPPS
TLTSSGSSSSTNTSSSGNLYSLHHHQRYGSDDRLNGWQSSRDSGLGGGWHQQQQGCENGH
LLLYPSSSVPATINTVGTGGGGNTILTSGGGSQPHSPLKRSVSLTPPMSGPSNQPLGHVW
LSQEDLRTTRGPAPDHAPLSPQSSIASSGSGGSEHLEEAGLGGGSGLHRSSFHEEGSGMR
DVPAWLKSLRLHKYAALFSTMTYDEMMSLTEDQLEAQKVTKGARHKIVISIQKLKERQNL
LRSLEKDVLEGSNLRAPLQELHQMIMTPIKAFSGGEEASLQRPLLSPEGKNAAPGSHLGG
GGGGEAESGASVIAEGDLPGQFTRVMGKVCTQLLVSRSDEDNISSYLQLIDKCLIHESFT
ETQKKRLLSWKQQVQRLFRSIPRKTLLDIAGYRPQRSRFGQSNSLPTAGCVGGSVSTRRS
LRQFQMPSRSLPGARLGLLGSGGLLGPTPRSSSSTPTGPKQGRQGLWFANPGGSNSMPSR
THSSVQRTRSLPVHTTPQTMVMFQQADHQLPVTEPDINNRLESLCLSMTEHALGDGADRT
STI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgtgatcaggtgggcgtgctagccagctggttcaaggggtggaatgagtgt
gagcagacagtggctctgctttccctgctgaaaagggtgagccggacccaggcccgcttc
ctgcagctctgtctggagcactcccttgccgaatgcaccgaactgcaggtcctggaggga
gaggccaacaacccaggagtgatcagccagtggcaaggcgagcctaaggagcgtgtcatc
tcacttgtcctcacccatctcccactgctcaaacctggcaatgttgaagccaagggtgag
tatatgcgcctgctgccacgcatcctggcccacaccatcgagcatggccaccacctggag
gagtctcgccagctcctgtcctacgccctcatccaccccgccacctccttggaagaccgc
gctgccctggcactctggctcaaccacctggaggaaagggctgctgctcggggagactca
ctggaaaggcctcctcctgcggggccacaccaccaccaccaccagtccacacctccatcc
accctcacctcatcaggatcctcctcctccactaacacctcttcatcaggcaacctgtac
tccttgcatcaccaccagcgctacggctcagacgaccgcctcaacgggtggcagagctcc
agggattcagggctgggcggaggatggcatcagcagcagcagggctgtgagaatgggcac
ctgcttctctacccatcatcctctgttccggcaaccataaacacagttggaactggtgga
ggcggtaacactatcctgacgagtggaggtggcagtcagcctcacagtcccctgaagcgc
tccgtgtccctgacgcctcccatgagcggccccagcaaccagcctctgggccatgtctgg
ctgtctcaggaggacctacggaccactcgaggcccagccccagaccacgcacctctatca
ccccagagcagcatcgcctcctcaggcagtggtggcagtgagcatctggaggaggctggt
ttaggaggtggttcaggtctgcatcgtagttcctttcatgaggagggcagtggcatgagg
gatgttcctgcgtggctgaagagtctccgtctccataaatacgccgctctcttttccact
atgacctatgatgagatgatgtcactgactgaagaccagctagaggcacagaaagtcact
aaaggagcaagacacaagatcgtcatcagcattcagaagctcaaagagaggcagaaccta
ctgcgcagcttggaaaaggacgtgttggagggcagtaatctgcgtgccccgctgcaggag
ctccaccagatgatcatgacgcctatcaaggctttcagtggtggtgaagaggcctccctg
cagcgccccctcctgagccctgagggcaagaacgctgcacctggctcccacctgggtggg
ggaggtggaggggaagcagagtcaggcgcaagtgtcatcgcagagggggatctacccggc
cagttcactcgtgttatgggcaaagtttgtacacagctactggtgtcgaggtcagacgag
gacaacatcagctcctacctacaactcatcgacaagtgccttatccatgagtccttcact
gagacgcagaagaagaggctgttgtcatggaaacaacaggtccagaggctgttccggtcc
attcccaggaaaaccctccttgacatagcagggtacagaccgcagaggagccgttttggc
cagtctaactctctccccaccgctggctgtgttgggggcagcgtgtcgaccaggaggagc
cttcgccagttccagatgccctccaggagcttgccgggtgccaggctgggcctgttggga
agtggggggctgctgggacccacacctcgcagctccagcagcacacctaccggtcccaag
caggggagacagggtctgtggttcgccaaccctggaggaagcaacagcatgcccagccgg
acccacagctctgtgcagaggacccgctccctgccggttcacaccacgccacaaaccatg
gtcatgttccaacaagctgatcatcagttaccagtgacagagccagacatcaacaatcgc
cttgagtctctgtgtctgagtatgacagagcacgccttgggagacggtgctgaccgcaca
tcaacaatatga
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integrated database retrieval system
