Seriola dumerili (greater amberjack): 111223791
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Entry
111223791 CDS
T05606
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
sdu03015
mRNA surveillance pathway
sdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111223791
09122 Translation
03013 Nucleocytoplasmic transport
111223791
03015 mRNA surveillance pathway
111223791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111223791
03041 Spliceosome [BR:
sdu03041
]
111223791
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111223791
Spliceosome [BR:
sdu03041
]
Complex C
Other components
EJC/TREX
111223791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
111223791
NCBI-ProteinID:
XP_022603785
LinkDB
All DBs
Position
Unknown
AA seq
1759 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
VGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNEQEDHAEVNNSTSCP
PQAQDVTPALAEQQKPPGPSGGEGMFAGGNEGESNRNQEAHMSGPPASGSVAMRVPERGS
ASSEVPADSDDEDSEDGEEDGDDDDWDSGARRRSLREPARVPTTRERSGASCQPQQQHIP
SLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARRSPSSSSSGSSSSGSRSSS
PEPQRSGHAERKPGPLTLLARKMESEGAFSGAGWHGGDGEGDRQDSSSPSAASFPGRGPP
EGLVSAITHTANTAGHVPFPMIPGTNQGVTGAQLAHIQVPVSVLKATATEERDRERDSEI
EREKAFELERQEKQRKLEQERAMEVERERALALEREEKQRALEKERIERQQALEREEREK
ALQRERELALERERQERELALERELALERERQERELALERERQERELALAKEREEREQAL
ARERALELERQKEIERQRALEQERLQREREEREKREREEMERALELERAKALEREREERE
RALEQERLERERALEAERKERIEREKALEQERLERERALEQERIAREKALELERERALEQ
ERIEREKTVERERIEREKALERERIEREKALERERIEREKALQQEKLERERALEQERLEL
ERKEKERIEREKELERERIEKEKALEREREEKEKAEREAALEKERMEKERAEKEKKERLE
REKALEQEKLERERKEKERAQEEERERALERERLDKEKAIQKEKEEQERALEQEKERARM
AEKERESHLPPSKRGREIGLTPLPTPPPLSTGPARKSSTDAGEQEDVHAPMSRSETQAAE
SGASMSPTPLSPQSSFKKFRFLRDSPIQPQSSSTSMVIKRPRTFSDTPQPRASPVFSPTS
FGERQQEGHEPSAEQEDPQKQTKHEVVAGPPGSVGIQSKKGTTAGTTLSQSSTKERATSL
VSEDKEQADSVKTEQAAKESTKKAKEVDESKRPSSPVDASQRKGRDAKKEVKQTRQRSSS
NDSSSSESDSGSSSSSRSSRSSTSSQEETSSTSRGRKDGKPGRDSSPQHRVTGDTQAEGL
KEIPKASARKREMSGEKSNKTADGDSHTKTPFIEAPTREGTQRKRKHSEAEEEKDKQRQE
KETAMAEPEKLPETSEETPKAFAARKISLSSNKLSPVSAESEQESGAAAGRKRRWGSSTA
VTAKKPSISITTDSLKSLIPDIRPSLGQEAIVDLHPEEAVLSGIEDEERERSDQDLQIRR
TVTQVVHSESQENGQKEAKRSRHEELEEEDLRGDGESTHEEKMETSFPGAVETQSPSHTS
HDVEINTVTPSDTLIRRSISQQKTGVSITIDDPVRTARQPSPPRGKVSNIVHVCNLVRPF
TLGQLKELLSRTGSLVEEGFWIDKIKSHCYVTYSCSEEAVATREALHGVKWPQSNPKVLS
VDFCQQDELDFHKGLGAADRPGAEEQGPGSGRGRTPGLPSLLPERDQWAEREREMERRER
ARAEREWDRDKVREFGKPGEEKEGGPRRSRSRERRRKERGKSKEKKTEKKEKAAEDPPAK
LLDDLFRKTKAAPCIYWLPLTEEQFVQREAARAERMKEREKRRKEQEEEEEKKREEERKE
RMKAGGGTTGDRSEGEKDKDRDRERDRDRDRGRDRDRDRERERERENDKRRDGYRRPGGS
GAGGGRRSRSRSDPRERRR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctggacgggagaccgctccagtctcttcgagtagca
gatttaaaagctgctcttgaggagaggggactttcgaaaagtggacagaagaatgctctc
attaaaagactcaagggggctcttatgttggagaacctgcagaggacctccacagctcac
gttggactgcagccaaactctcagattggtgaggaaatgagccagaacagctttatcaag
cagtatctggctaaacaacaggagctcctgaggcagcgtctggagagagaggctcgtgaa
gcatatgaaacaaatgagcaagaggaccacgcagaagttaacaatagtacttcatgtcct
cctcaagcccaggatgttacacctgcattggctgagcagcaaaagccaccaggcccctct
ggtggagagggaatgtttgctggagggaatgagggagagagtaacaggaaccaggaggct
cacatgtctggtcctccagcgtctggctctgtggccatgcgtgttcctgagaggggttct
gcatccagcgaagttccagctgacagcgacgatgaggatagcgaggatggagaggaggat
ggtgacgatgatgactgggacagcggtgctcggaggagaagcctcagagagccagctaga
gtacccacgaccagagagaggtccggagcatcctgtcaaccccagcagcaacacatccct
tcccttttgtctcctcagctacgccagccaacacctcccccctccccgcctccagagttg
tcattccccttacctgacacccctaaacagagcccccctagtccagatgtagccccagct
aggcgctcacccagtagctccagctctggttcctccagcagcggcagccgcagtagcagc
ccagagccacagaggagtggacatgccgaacgcaagcccggaccactgacccttctggca
cgtaaaatggagtcggaaggtgctttctctggagcaggttggcacggcggcgatggggaa
ggcgatagacaggatagcagttcgccttcagctgcatcgttccccggcagagggcctcca
gagggtctggtatctgccatcactcacacagccaacactgcaggccatgtgccatttccc
atgattccaggcaccaaccagggtgtcacaggagcacagttggcccatattcaagtaccc
gtgagtgtgctcaaggccactgcaacagaagagagggacagagagagggactctgagata
gaaagagaaaaggcgtttgagctggaaaggcaagagaagcagagaaaacttgagcaagaa
cgagcaatggaggtagagcgtgaaagagctcttgcactagagagagaggaaaagcagaga
gctctggagaaagagcgaattgagcgacagcaggccttagaaagagaagaacgagaaaaa
gctttacagcgggagagagaacttgctctagagcgagagaggcaggagagggagcttgct
ctggagagggagcttgctctggagcgagagaggcaggagagggagcttgctctagagcga
gagaggcaggagagggaacttgctttggctaaagagagagaggagcgagagcaagcctta
gcacgagagagggccctggagctggagaggcagaaggagatcgaaagacagagggctctg
gagcaagaacgtttacagagagaaagagaggagagggagaaacgagagagagaagaaatg
gagagagcgctggagctagaaagagccaaggctttggagagggaaagggaggagagagag
agggctcttgagcaagagaggttagagagagagagagctttggaggctgagagaaaggag
aggattgaaagagagaaggccttggagcaagaaaggttagaaagggagagagccttagag
caagagaggatagcgagagagaaagccctggaactagagagggagagagccttggagcaa
gagaggatagagagagagaaaactgtagaacgggagaggattgagagagagaaggcctta
gagcgggagagaattgagcgagagaaagccctggagcgagagagaatagaaagagaaaag
gctctacagcaagaaaagttggagagagagagagctctagagcaggaaaggttggagctt
gagaggaaggaaaaggagagaattgaaagagagaaagaattagaacgagagaggatagag
aaggaaaaggccctggaacgagaaagggaggaaaaagagaaggctgagagggaggcagct
ctggaaaaggagaggatggagaaggaaagagctgaaaaggagaagaaagaaaggctagag
agggagaaagctctagagcaggagaaactcgaaagggagagaaaggagaaagagagagct
caggaggaagagagggaaagggctctcgaacgcgaaagattagacaaagagaaagccata
cagaaagagaaggaggagcaggagagggccttggaacaggagaaagagagagctaggatg
gctgaaaaggagagggagagtcacctccctccatccaaacgtggccgggagattggtctc
acccccctgcccactcctccccccctctccacaggaccagctagaaaatcatcgactgat
gcaggagagcaggaagatgtccatgctccaatgtcccggagtgaaacccaagcagcagag
tccggtgcatcgatgtcaccaacacctctgtcaccacagtcctcatttaagaagttccgg
ttcttaagggactctccgattcagccccaatcttcctccacttccatggttatcaagcgg
ccccgtaccttctctgataccccccagcctcgggcctcacctgtcttctcccccaccagt
tttggggaacgacagcaggaaggacacgagccctctgctgaacaggaagatccacagaag
cagacaaaacacgaggttgttgccgggccaccgggatcggttgggatccagtctaagaag
gggacaactgctggcaccacattgagccagagttccacaaaagaaagggccacaagtctc
gtatcagaggacaaagaacaggcagattcagtgaagactgaacaggctgccaaggaatcc
accaaaaaggcaaaagaagtggatgaaagcaagcgcccttcaagtccagtggatgcctca
cagcggaagggaagagatgcaaagaaggaagtgaaacaaacgagacagcggtcatcatct
aatgattcctcttcctcagaatcggactctgggtcctcatcatcatctcggtcctcgagg
tcatccacgtcttctcaagaggagacttcctccacctccagaggtagaaaggacgggaaa
cctggaagagattcctcaccgcagcacagggtgacaggagacactcaggctgagggttta
aaggaaatcccaaaagcctctgctcgcaaaagagagatgtctggagagaagagtaacaaa
actgctgatggagatagtcacaccaagacacctttcattgaagctccaacccgagagggg
acacaaagaaaaagaaagcacagcgaagcagaggaggaaaaggacaaacaaaggcaggag
aaagaaactgctatggcagagccagagaagcttccagagaccagcgaggagacaccgaag
gccttcgcagctcgtaagatctctcttagcagcaacaaattgtccccggtcagtgcagag
agtgagcaggagtctggggctgcagccggtcgcaagaggaggtggggatccagcacagct
gtcactgccaagaaaccttccatcagcatcaccacagactctctcaagtctctgatccca
gacatccggccgtctctcggccaggaggcaatagtggatctgcacccggaggaagctgtc
ctctctgggattgaggatgaagagagggagcgctccgaccaggaccttcagatccgtcgc
actgtcacacaggtggtgcactcggagagccaggagaatggacagaaagaggcgaagagg
agcagacatgaggagctggaggaggaagatctacgaggagacggagaaagcacgcatgaa
gagaaaatggaaacctcgtttcctggagcagtggaaacccaatcaccatcacataccagc
catgatgtagaaatcaacactgtgacccccagcgacaccctcattagacgctccatcagc
caacagaaaacgggtgtttctatcacaatcgatgaccctgttcgcacggcacggcagcct
tcaccgcctcgtggcaaagtctccaacattgttcacgtctgcaacctggtgaggccgttc
actttggggcagcttaaggagctgctcagccgaactggatccctggtggaggagggcttc
tggattgacaaaatcaagtctcactgctacgtcacttactcctgctcagaggaggccgtt
gccacacgggaagctcttcatggagtgaaatggcctcagagcaacccaaaagtccttagc
gtggacttctgccagcaagatgagctggacttccacaaaggcttgggtgcagctgacaga
cccggagctgaggagcagggtcctggctccggccgtggtcgaacaccaggccttccctct
ctcctcccggagcgagaccagtgggctgagcgtgagcgtgaaatggagcgtcgggagaga
gctcgagctgagcgggagtgggatcgtgacaaggtcagagagtttgggaaacctggagaa
gagaaagagggaggtcctcggaggtcgcgctctcgagagagacggcgtaaggagagggga
aagagcaaggagaagaagactgaaaagaaggagaaagcagccgaggatccacctgcaaag
ctgcttgatgacctgttccgcaaaactaaagcagctccttgcatatactggcttccactt
acagaggaacagtttgttcagcgagaagctgccagagcagagcggatgaaggagcgtgag
aaacggaggaaggagcaagaggaggaggaggagaaaaaaagggaagaggagcgcaaggag
aggatgaaagctggaggtggcacaacaggagaccggagtgagggtgagaaggacaaggac
agagacagagagagggatagagacagagaccgaggtagagacagagacagagacagggag
agggaaagggagagggaaaatgacaaacgcagggatggctaccgtaggccggggggcagc
ggggcaggcggggggcgacgctcacgcagccgcagcgacccgcgagaaaggcgacgttaa
DBGET
integrated database retrieval system
