Seriola dumerili (greater amberjack): 111223889
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Entry
111223889 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04517
IgSF CAM signaling
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111223889
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111223889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111223889
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111223889
Intermediate filaments
Intermediate filament-binding proteins
111223889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SCAR_helical
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
111223889
NCBI-ProteinID:
XP_022603908
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIV
DGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFT
TSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVD
HPDEKSIITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIE
QTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQK
VYTPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLS
ENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVSVAKELEAESYHDIKRI
TARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKH
LLGVEDLLQKHALVEADIAIQADRVRNVNSNAQKFANDSEGYKPCDPQIIRDRVAHMEFC
YQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQ
HKAFEDEMSGRAAHLQQTIKQGDELVADNHFGADKIKERIQDIQEQWAALERLSAVRKAR
LQEACNQHQFQADADDIDTWMLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIGSYRPV
IEALHEQSRTLPPEKANSEEVQSRLAGIEERYKEVAELTRLRKQALQDALALYKILSEAR
ACEVWIDEKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMNNQASRVAVVNQVARQLIHSG
HPSEKEIKAQQDKLNTRWSQFRDLVDQKKDSLNSALGVQNYHLECNETKSWIKEKTKVIE
STQELGNDLAGVMALQRKLTGMERDLAAIEDKLGDLGKEADRLSSEHTEQSEAIKGRLAE
ITSVWDEMKDTMKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEK
LLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWE
NRQNLLSQSHAYQMFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMD
ANEEKISGVVDTGRRLVADGNINAERIQEKVDSIDQRHKKNRAAASDLLMRLKDNRDLQK
FLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIDKDGQT
LMAEKPETEAMVKEKLASLKTMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWLAGM
DGQLQSDDYGKDLTSVNILLKKQQILESQVEVRQKEVEELQSQSQALSQEGKGSEEVDGQ
RISVEKKFQSLQAPLQKRRDNLMASREIHQFNRDVEDEILWVEERMALATSTDHGHNLQT
VQLLIKXNQTLQKEIQGHQPRFDDIFERSQHILREDSPTSELIRQRLDELQSLWEQIRKE
TEKRHSRLSEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQA
VEDYADTVHQLSSTSRGLVAAGHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRL
FQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNR
LADELINTGHGDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNR
ILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKAD
DIQKREGEVLDAWKNLLEAVEGRRLKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKP
RDVSSVELLMNNHQGIKAEIDARNDSFTSCIELGKALLARKHYASEEIKEKLLQLTDKRK
DMIDRWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSSLIGQSVDEVEKLIKRHE
AFEKSAATWEERFAALERLTTMELLEVRRRQEEEEKRRQPTPTEAQPVDAAAQQKEGEPV
SQNGLPSDQESPRENVEGGEVVNGVSEPSPAGSPGASRKGKPSQAATLPAKSQQDVSTSQ
LEGFLHRKHEWEGHNKKASSRSWHNVYCVINQQEMGFYKDQKSASQGIPYHSEIPISLKD
AVCEVALDYKKKKHVFKLKITDGNEYLFQAKDDEEMNTWISAISSAVAGERSEVTPSSHS
TPAPAARAQTLPASVASVTAESSPGKREKDKEKRFSLFSKKK
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggacggacgcatgctcatcaagctgctggaggtcctgtcaggagagaga
ctgcccaaacccaccaagggccggatgcggatccactgtctggagaacgtggacaaggct
ctgcagttcctcaaggagcagagggtccacctggagaacatgggctcccacgacatcgtg
gacggaaaccaccgcctcaccctgggcctcatctggaccatcatcctccgcttccagatc
caggacatcagcgtggagacggaggacaacaaggagaagaagtcggctaaagacgctctg
ctgctctggtgtcagatgaagactgcagggtatccaaacgtcaacatccacaacttcacc
accagctggagagacgggatggccttcaacgctctcatccacaaacacagaccggacctg
atcgactttgataagctgaagaaatcaaacgctcactacaacctgcagaacgccttcaac
ctggccgagcaacacctgggcctcaccaagctgctggaccccgaggacatcagcgtggac
caccctgatgagaagtccatcatcacctacgtcgtgacctactaccactacttctccaag
atgaaggctctgaaggtcgaggggaagagaatcggaaaggttctggacaacgccatcgag
acggagaagatgatcgagaagtacgagtctctggcgtccgacctgctggagtggatcgaa
cagaccatcatcatcctcaacaacaggaagttcgccaactctctggtgggagtccagcag
cagctgcaggccttcaacacgtaccgcaccgtggagaaaccaccaaagttcacagagaaa
ggaaacctggaggttcttctgttcaccatccagagcaagatgagagcgaacaaccagaaa
gtttacactcctcgcgaaggaaaactcatctctgacatcaacaaggcgtgggagcgtctg
gagaaggcggagcacgagcgggagctggccctaaggacggagctgattcgtcaggagaag
ctggagcagctcgcccgacgcttcgaccgcaaagccgccatgagggagacgtggctgagt
gagaaccagaggctcgtctcccaggataactttggattcgacctccaggctgttgaagct
gccactaagaaacacgaggccatagaaacagacatcgcagcctacgaggagcgagttcag
gcggtggtttccgtggcgaaggagctggaagcggagagttaccatgacatcaaacgcatc
acggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaaggcc
cgccggcagagactggagatgaacctgggcctgcagagagtcttccaggagatgctctac
atcatggactggatggacgagatgaagatgctgctgctctctcaggattatgggaaacac
ctgctgggtgtggaggaccttctgcagaaacacgctctggtggaggccgacatcgccatc
caggccgaccgagtccgaaacgtcaacagcaacgcgcagaagttcgccaacgactccgag
ggttataagccctgtgacccacagatcatcagggaccgagtcgctcacatggagttctgt
taccaggagctgacccagctcgcggccgagcggcgagctcgcctggaggagtcccgccgc
ctctggaagttcttctgggaaatggcagaagaggagggttggatcagggagaaggagcag
atcctgtcctccgaggattatgggaaggatctgacgggcgcgttgcgactgctgagtcag
cacaaagccttcgaggatgagatgagtgggcgagctgctcatttacagcagaccatcaaa
cagggcgacgagctggtggccgacaaccactttggagccgacaagatcaaagaacggatc
caggacatccaggagcagtgggcggctctggagcgtctctctgccgtccgtaaagctcgt
ctgcaggaggcctgcaaccagcaccagttccaggctgacgccgacgacatcgacacatgg
atgctggacgtgctgcggatcgtctccagtgtcgacgtcggccacgacgagttctccact
caggcgctggtgaagaagcacaaggacgtcgccgaggagatcggcagctaccggcccgtc
atcgaggctctgcacgaacagtcccgcacgctgccgcccgaaaaggccaactctgaggag
gttcagagccggctggcgggcatcgaggagcgctacaaggaggtggcggagctgacgcgt
ctcaggaagcaggcgctgcaggacgcgctggcgctctacaagatactgagcgaagccagg
gcctgcgaggtgtggatcgacgagaaggagcagtggctcaacagcatggagatccccgag
aaactggaggacctggaagtggtccagcaccggttcgagagtctggagccggagatgaac
aaccaggcgtcacgggtcgccgtggtgaaccaggttgccaggcaactgatccacagtgga
catcccagtgagaaggagatcaaagctcagcaggacaaactgaacaccaggtggagtcag
ttcagagacctggtggaccagaagaaggacagtctgaactcggctctgggcgtccagaac
taccacctggagtgcaacgagaccaagtcctggatcaaagagaagaccaaggtgatcgag
tccactcaggagctggggaacgacctggccggcgtcatggctctgcagaggaagctgacg
gggatggagcgcgacctggccgccatcgaagacaagctgggcgacctggggaaagaggcg
gaccgcctgtcctccgagcacacggagcagtctgaggccatcaagggacgtctggctgag
atcaccagcgtctgggacgagatgaaggacaccatgaagaaccgggaggagtctctgggc
gaggccagcaagctgcagcagttcctgcgcgacctggacgacttccagtcgtggctgtcg
cgcacgcagacggccatcgcctccgaggacatgcccaacacgctggccgaggccgagaag
ctgctggcccagcacgagggcatcaagaacgagatccgcaactacgaagaggactaccag
aagatgcgggacatgggtgagatggtgacgcagggtcagacggacgcccagtacatgttc
ctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccgacagaacctgctgtcccagtcccacgcttaccagatgttcctcagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgtcctggctcacaccgagatgcccacc
actctggagggggccgaggccgccatcaagaagcaggaggacttcatgaccaccatggac
gccaacgaggagaagatcagcggcgtggtggacaccggccgccgcctggtcgctgacggc
aacatcaacgccgagcgcatccaggagaaggtggactccatcgaccaaagacacaagaag
aaccgagctgctgccagtgacctgctgatgaggctgaaggacaacagagacctgcagaag
ttcctgcaggactgccaggagctgtccctgtggatcaacgagaagatgctgacggcccag
gacatgtcgtacgacgaggccagaaacctccacagcaagtggctcaaacaccaggccttc
atggccgagctgcaatccaacaaggagtggctggacaagatcgacaaggacgggcagacg
ctgatggcagagaagccagagacggaggccatggttaaagagaagctggcgtccctgaag
accatgtgggaggacctggagtcgaccacccagaccaaggccaagtgtctgtttgacgcc
aacaaggccgagctgttcacccagagctgcgccgacctggacaagtggctggccggcatg
gacggacagctgcagtccgacgactacggcaaagacctgacctccgtgaacatcctgctc
aagaagcagcagatcctggagagccaggtggaggtgcgtcagaaggaggtggaggagctg
cagagccagtcgcaggccctcagccaggaggggaaaggctccgaggaggtggacggccag
aggatcagcgtggagaagaagttccagtccctccaggcgccgctgcagaagagacgagac
aacctcatggcctcccgggagatccaccagttcaacagggacgtggaggacgagatcctc
tgggttgaggagaggatggctctggccacatcaaccgaccacggacacaacctgcagact
gtacaactgctcatcaagtagaaccagaccctgcagaaggagatccagggccatcagcct
cgctttgacgacatcttcgagcgcagtcagcacatcctgagggaggacagcccgacgtcc
gagctgatccgccagcggctcgacgagctccagtcgctatgggaacagatcaggaaggag
acggagaagcgtcacagccggctcagcgaggcccacgaggcccagcagtactacttcgac
gccgccgaggccgaggcctggatgagcgaacaggagctgtacatgatgtcagaggagaag
gccaaggacgagcagagttcagtggccatgctgaagaagcatcagatcctggagcaggca
gtggaggattacgccgacactgtccaccagctgtccagcaccagccggggcctggtggcc
gctggacaccctgacagcgagcgaatcgggatgcgtcagtctcaggtggacaagctgtac
gccggcctgaaggatctgtcggaggagcgtcgagggaaactggacgagcgtttccgtctc
ttccagctcaacagagaggtggacgacctggagcagtggatcgctgagagggaggtggtg
gccggatcccacgagctgggacaggactatgagcacgtcactatgctgcaggagcgcttc
agagaatttgcccgtgacaccgggaacatcggtcaagagcgtgtggacggcgtcaaccgt
ctggcggacgagctgatcaacaccggccacggcgacgccgccaccatcgcggagtggaag
gacggcctgaacgaggcctgggccgacctgctggagctcatcgatacccggacgcagatc
ctcgccgcctcctacgagctccacaagttctaccacgacgccaaggagatcctcaaccgc
atcctggacaaacacaagaagcttcccgaggagctgggccgcgaccagaacacagtggag
accctacagaggatgcacaccaccttcgagcacgacatccaggctctgggaacacaggtg
cggcagcttcaggaggacgccgtccgtctgcagtcggcttacgctggagacaaagccgac
gacatccagaagagagagggagaggtcctggacgcctggaagaacctgctggaggcggtg
gagggccggcggctgaagctggtcgacaccggagacaagttccgcttcttcagcatggtg
cgggacctgatgctgtggatggaggacgtcatccgcctgatcgaggcccaggagaagccc
agggacgtgtcgtcggtggagctgctaatgaacaaccaccagggcatcaaggcggagatc
gacgcccgcaacgacagcttcacctcctgcatcgagctgggcaaagccctgctggccagg
aagcactacgcttcagaggagattaaagaaaagttgctacagttgacggacaagaggaaa
gatatgattgacaggtgggaggacagatgggagtggctaagactggtcctggaggtgcac
cagttctcccgggacgcgggcgtggccgaggcgtggctgctgggtcaggagccgtacctg
tccagcagcctgattggccagagcgtggacgaggtggagaaactcatcaaacgccacgag
gccttcgagaagtcggccgccacctgggaggaacgcttcgccgcgctggagaggctgacc
acgatggagttactggaagttagaagaaggcaagaggaagaagagaagaggagacaaccc
acgcccactgaggctcagcccgtcgacgctgccgcacagcaaaaggagggagagccggtg
tctcagaacgggctgccgtccgaccaggagtcccccagggagaacgtcgaagggggcgag
gttgtgaacggggtgtcggagcccagccccgcggggtctcccggggcgtcccgcaagggc
aagcccagccaagcggcaactctgccggccaaaagccagcaggacgtttccacgtcccag
ctggagggcttcctgcaccgcaaacacgagtgggaggggcataacaagaaggcttcaagc
aggtcatggcacaacgtgtactgtgtgatcaaccagcaggagatgggtttctacaaggat
cagaagagcgccagtcagggaatcccctaccacagcgagatccccatcagcctgaaggac
gccgtctgtgaggtggcgctggactacaagaagaagaagcacgtcttcaagctcaagatt
actgacgggaacgagtatctcttccaagccaaagatgacgaggagatgaacacgtggatc
tcggccatctcgtccgccgtggcgggagagaggtcggaggtcacgcccagcagccatagc
acgcccgcccccgccgcacgcgctcagacgctgccggcatccgtcgcctcggtgacggcc
gagtccagcccgggcaaacgggagaaggacaaggagaaacgcttcagtctgttcagcaag
aagaaatag
DBGET
integrated database retrieval system
