Seriola dumerili (greater amberjack): 111223992
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Entry
111223992 CDS
T05606
Symbol
bbs4
Name
(RefSeq) Bardet-Biedl syndrome 4 protein
KO
K16531
Bardet-Biedl syndrome 4 protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111223992 (bbs4)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdu03037
]
111223992 (bbs4)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
111223992 (bbs4)
Cilium and associated proteins [BR:
sdu03037
]
Primary cilia and associated proteins
BBSome
111223992 (bbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_19
TPR_14
ANAPC3
TPR_16
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_7
ARM_TT21_2nd
TPR_15
ARM_TT21_4th
TPR_Slam
NatA_aux_su
ARM_TT21_N
ARM_TT21_C
PknG_TPR
TPR_20
HAT_PRP39_C
ChAPs
HrpB1_HrpK
CotJB
Motif
Other DBs
NCBI-GeneID:
111223992
NCBI-ProteinID:
XP_022604056
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MATASSVAHPKMADQEATTVLPVSTEAKKRRAPKAPELPIVERRNWLIHQHYIRKDYDTC
KAIIKEQLQETNGMCEYAIYVQALILRLEGKIQQSLELFQSCAILNPSSADNLKQVARSL
FLLGKHKAAIEFYHEAARLNEKDWEISHNLGVCYFFIKDFKNAEEHLNIALLINKHDKTF
MMLGKVHLLAGETDKAIEVYKRAVEYSPENTELLTTLGLLFLQLGKYQKAFEHLGNALTF
DPNNYKAILAAGSMMQTHGDFDVAMNKYRVAACAVPESPPLWNNIGMCFFGKKKYVAAIS
CLKRAHYLSPFDWKVLYNLGLVHLTMQQYASAFHFLSAAINLNPRMGELYMLLAVALTNL
EDVENATRAYEQAVTLDESNPLVNLNFAIFLYNHGDKKGALDQYQEMERKVNQLRDSSSN
FEFDIELVDMAQKMGGALQVAESLVWTKPGKDSKSKPNSAAATKTPGAPLGTNQALGQAM
SSAASYNKNIQLPAGVSKGPSMPLEPEPDVDKAPSPPSDPPGSPEPAESDNAKPRTSKRK
TKVEE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcttctagtgttgctcatcccaagatggcggaccaagaggcaaccacggtg
ctcccagtttctactgaagccaagaaacgccgggcaccaaaagctccagagcttcccatt
gtggagaggagaaactggctaatccaccagcattatatccgcaaagactatgatacctgt
aaggcgatcatcaaagaacaactgcaggagactaacggaatgtgtgaatatgccatatat
gttcaagcactaatcttgcgtcttgagggcaagatccagcagtccctggagctgtttcag
agctgtgccatccttaatcccagcagtgctgacaatctcaagcaagtggccagatcccta
tttctcctgggaaagcacaaagcagccattgaattctaccatgaagctgcaaggctcaat
gagaaagactgggagatcagtcataatctgggtgtgtgctatttcttcatcaaagacttc
aaaaatgctgaagagcatctaaacatagctctcctgataaataaacatgacaagacgttc
atgatgcttgggaaagttcatctactggctggagaaactgacaaggccatagaagtgtat
aagagagcagtggaatactccccagagaataccgaactcctgacaactcttggtctgctg
tttttacagcttgggaaataccaaaaagcatttgagcaccttggaaatgccctcactttt
gaccccaacaattataaggccatcctggctgcaggcagcatgatgcagacccatggtgac
tttgatgtggccatgaacaagtaccgagtggcagcatgtgctgtgcccgagagcccccct
ctctggaacaacatcggcatgtgcttctttgggaaaaagaaatatgtagctgccatcagc
tgcctgaagcgggcccactacctgtctccttttgactggaaagtgttgtacaacctgggt
ctggtacacctgacaatgcagcagtacgcttcagccttccacttcctcagtgcagccatc
aacctgaacccacggatgggggaactctatatgttgctggcagtggctctgaccaacttg
gaggatgtggagaatgccaccagagcgtatgaacaagctgtgactctggatgaatccaac
cctttggttaacctgaactttgcaatcttcctctataatcatggtgataagaagggagct
ctggatcagtatcaggagatggagaggaaagtcaaccagcttcgagacagcagtagcaac
tttgaatttgatattgagctggtggacatggctcagaagatgggaggtgctctgcaggtg
gcagagagtctggtgtggactaaaccaggcaaggactccaaatcaaaaccaaactcagca
gcagctaccaaaacccctggtgctcccctcggtactaaccaagccctgggtcaggccatg
tcttctgctgcaagctacaacaagaacatccagttaccagcaggagtttccaaaggaccc
tccatgccccttgagccagaacctgatgtggacaaagcccccagcccacccagtgatcct
ccaggctccccagaacctgcagagtcagacaatgccaaacccagaacttccaagaggaaa
actaaggtggaggaatga
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