Seriola dumerili (greater amberjack): 111224006
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Entry
111224006 CDS
T05606
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00260
Glycine, serine and threonine metabolism
sdu00630
Glyoxylate and dicarboxylate metabolism
sdu00670
One carbon pool by folate
sdu01100
Metabolic pathways
sdu01200
Carbon metabolism
sdu01230
Biosynthesis of amino acids
sdu01240
Biosynthesis of cofactors
sdu04981
Folate transport and metabolism
Module
sdu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
111224006 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
111224006 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
111224006 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
111224006 (shmt2)
Enzymes [BR:
sdu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
111224006 (shmt2)
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Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
111224006
NCBI-ProteinID:
XP_022604073
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSFALRQLTRPLCQRAPVRLSVRGQQSHAATRTVDEDRPWTGQESLAQDDPEMWDLLLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYGRVKKLCT
DIKAYMLADMAHISGLVAAQAIPSPFEHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYINQVLKNARAMAA
ALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTAKLQDFKNFLLQDPETVARIA
ELRHRVEAYARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgagacaactcacacggccactgtgccagagagccccagttcgt
ctcagtgtacgtgggcaacagtctcatgctgctacacgtacagtggatgaagaccgtcct
tggacaggccaggagagcctggctcaggacgaccccgagatgtgggatctgctgctgaaa
gagaaggacaggcagtgccgtggcttagaactaattgcatctgagaatttctgcagtcga
gcagctctggaagctcagggctcctgtttgaacaacaaatactctgagggctacccaggg
agaagatactacggtggagcagaagtggttgaccaaattgagctcctgtgtcagaagcga
gccttggaggcttttgaccttgacccagctctgtggggcgtcaatgtccagccttactct
ggctcacctgccaactttgctgtttacaccgctgtgctcaacccccacgaccgcatcatg
ggcctggacctgcccgacggaggacatctgacccatggctacatgtctgatgtaaagagg
atctcggcaacctcgatctattttgagtccatgccctacaaactaaatactgcaacagga
ctcatagactacgaccagatggagatgacggccaagctgttccggcccaagctcatcatt
gctggcaccagcgcctatgcccgcctcattgactacggccgcgtcaagaagctgtgcact
gacattaaggcctacatgctcgctgacatggcccatatcagtggcctggtggcagcccaa
gccatcccctctccctttgaacacgctgacctggtcacctctaccacgcacaaatcgctc
cgaggagccagggctggcctcatcttctaccgtaagggtgttcgctcagtggacaagaag
gggaaggagatcatgtacgacctcgaagacaaggtcaacttctctgtcttcccctctctg
cagggtggacctcataaccatgccatcgctggtgtggctgtagcactcagacaggcacag
tctcccatgttcaaggagtatatcaaccaggtactaaagaatgccagggctatggctgca
gctcttctcagtaaaggctacaccttggtatcaggtggaaccgacaaccacctggtcctg
gtggacctgcggcctaagggcattgatggagctcgagctgaaagggtgctggagcttgtg
tcaatcactgccaataagaacacctgccctggggacaagagcgccctgactccaggtggc
ctcaggctaggtgctccagccctgacctccagacagttcaaagaagcagactttgtgcaa
gttgttgagttcatggatgagggcttcaagattgccttggatgtcaagaaaaagacagca
aagctccaggacttcaagaacttccttcttcaggacccagagactgttgctcgcatcgct
gaacttcggcacagagttgaagcttatgccaggccctttcctatgccaggcttccatgat
cattaa
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