Seriola dumerili (greater amberjack): 111224072
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Entry
111224072 CDS
T05606
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111224072 (lrp4)
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111224072 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
111224072
NCBI-ProteinID:
XP_022604179
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MQLAAVLWGALVTLLLNQTPGIQGSAECSCGRNHFTCAVSAFGECTCIPAQWQCDGDNDC
GDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHC
QNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDTDCKDGS
DEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFM
CSSGMCINAGWRCDGEYDCDDQSDEKNCTTSMCTADQFRCGTGRCVRLSWRCDGEDDCSD
RSDEEGCEKTESPPCAPDQFQCGNGRCIGQRKVCNEANDCGDGTDELPHHDCRPRSNEGN
CNQNNGGCSQKCQMVRGLVQCTCHTGYRLMDDGKACQDVDECAEEGYCSQGCTNTQGGFQ
CWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHH
SRELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEV
ANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADTHL
FWPNGLTIDYAGRRMYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYWTD
WHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGRNRCGTNNGGCSHLCLPSN
KTYTCACPTGFKKVDQYNCANGLDKFLLFARRTDIRRVSFDTEDMSDDVIPLADVRNAVA
LDWDAKDGYIYWTDVTTDSINRALWNGAKQEVVVDTSLESPAGLAIDWVTSKLYWTDAGT
DRIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASSRIVI
ISSNLTWPNGLAIDYQTKRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTVHEDK
LYWTDWQSKSIQSADKLTGLGRHTLAENLENLMDIHMFHRHRETVRNPCAVNNGGCSHLC
LLAPAPKASSCACPTGINLQTDGKTCTPGMNSFLIFARRTDIRMVSLDIPYFADVVLAVN
SSMKNTIAIGVDPKEAKVYWSDSTLKKISRANINGTAHEDIISTGLVTTDGLAVDARGRK
IYWTDTGTNRIEVANLDGSMRKVLVWQNLDSPRAIALYHEMGYMYWTDWGEHAKLERSAM
DGSDRVVLISNNLGWPNGLAIDMAGSQLLWADAHTEGIEASDLNGQNRRTLVTPVQHPYG
LTLLGSHIYWTDWQSRSIQRADKNTGANTITVRANLPGLMDIQAVDREKPLGFNKCGRRN
GGCTHLCLPRPNGTSCACPTGILLKGDGRSCDDSPETYLLFSNRVSVRRISLDTNDHTDV
HVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGTDMETVISQGLKTTDGLAVDW
VARNMYWTDTGRNTIEVARLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIE
RSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLVSPVS
HPFALTQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVEGLMDIIVVSPHRQTGTNLC
GVNNGGCTHLCFAKTNSFVCACPDEPDERPCSTISGYIPTSPAKGTSSTPVPNKIPKAPT
DAPHRGPSLVNCTDKNLSVEGCSSNVVTAPHGEGLHISYVIGGVLTILAILILIAALIIY
RHKKSKFADPGVSNLTYSNPSYRTSTQEVKIEASQKPPIYNQLRYKKEGGVDGGYTKEKI
RIVEGVCLLSNEELYWDDLKQIKPSRGGLHTCMRTDTVSLQASSASLDDGETEQLLQEEA
SECSSITTLTPSAITPQRHAQHSLPDTGWTSTRKPSTESEV
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggccgcggtgctgtggggagccctggtaactttactgctcaaccagactcca
ggcattcagggcagcgctgagtgttcgtgtgggaggaatcacttcacgtgtgcggtcagt
gcgttcggggagtgtacctgcatcccggcccagtggcagtgcgacggagacaacgactgc
ggggaccacagcgacgaggacggatgcatgctccccacctgttcgccgctggacttccac
tgcgacaacggcaaatgtatccgtcgctcctgggtgtgtgacggagacaacgactgtgag
gacgactctgacgaacaagactgtcctcccagggagtgtgaggaggatgagtttcactgc
cagaatggctactgtattcgcagcctctggcactgcgacggcgacaatgactgcggggac
aacagtgatgaacagtgtgacatgcgtaaatgttcggacaaggagttccgctgcacggac
ggcagctgcatcgccgagcactggtactgtgacggagacacggactgcaaagatggatcg
gatgaggaaaactgcccctcagatgtgatgacggccacctgcagcgtggaggagttccag
tgtgcgtacgggcgctgcatcctggacatctaccactgcgatggagacgacgactgtgga
gactggtcggatgagtcggactgttcctcccaccagccctgcagatcagttgaattcatg
tgcagcagtgggatgtgcatcaacgccggctggaggtgtgacggcgagtatgactgtgac
gaccaatcagacgagaagaactgcactacgtccatgtgcacggctgaccagttccgctgt
ggtaccggacgctgcgtccggttgtcatggagatgcgatggcgaggatgactgctcggac
cgcagcgatgaagagggctgtgagaaaacggaaagtcctccctgtgctcccgatcagttc
cagtgtgggaacggccgctgtatcggtcagaggaaggtgtgtaatgaggccaatgactgc
ggagacgggaccgacgagctgccgcaccacgactgccgtccgcgctccaacgagggcaac
tgtaaccagaataacggaggctgctcccagaagtgtcagatggtcagaggactggtccag
tgcacctgtcacactggataccgactgatggacgacggcaaagcctgccaggatgtggac
gagtgtgccgaagaaggctactgcagccagggctgtaccaacacgcagggggggttccag
tgctggtgcgtccaggggtatgagctccgacctgacaagcgcagctgcaaagctctgggt
ccagagccggtcctgctgttcgccaaccgcatcgacatccgtcaggttttgccgcatcgc
tccgagtacacgctgctgttaaacaacctggagaacgccatcgccctggacttccaccac
agccgcgagctggtcttctggtcagacgtgacactggaccgcatcatgaaggccaacctc
aacggctccaatgtagaggaggtggtctccaccggtctggagagcccaggtggactggcc
atagactggatacatgacaagttgtactggacagactcagggacgtcccgcatcgaggtg
gccaacctggacggaacgcaccgcaaagtgctgctgtggcagaacatggagaagccccga
gccatcgcactgcaccccatagaggggaagatctactggacggactggggcaacacgcct
cgcatcgagtacgccaacatggacggctccaaccggcgggtgatcgcagacacacacctg
ttctggcccaacggcctcactatcgactacgccggacgccgcatgtactgggtggacgcc
aagcaccacgtcatcgagagggctgacctggatggacgcaaccgcaaagccgtcatcagc
caaggcctgccccacccatttgccatcacagtatttgaggacagcctctactggaccgac
tggcacaccaagagcatcaacagcgccaacaaattcacaggcaagaaccaggagatcatt
cgcaacaagctgcacttccccatggacatccacacgctgcacccccagaggcagcccgca
ggtcggaaccgctgtggcaccaacaacggaggctgcagccacctgtgtctccccagcaac
aagacgtacacctgtgcctgtcccaccggcttcaagaaggtggaccaatacaactgcgcc
aacggtcttgacaagttcctgctttttgcccgaaggacggacatccgacgagtcagcttt
gatacagaggacatgtccgatgatgtcatccctctggctgacgtgcgcaatgccgtggcg
ctggactgggacgccaaagacggctacatctactggacggacgtcaccaccgactctatc
aacagagcgctgtggaacggcgccaagcaggaggtggtggtggacaccagtctggagagc
ccggcaggtttggcgattgactgggtgaccagcaagctctactggactgatgctggaaca
gatcgtattgaagtttctaacgctgacgggagcatgcggaccgtcctgatctgggagaac
ctggaccggcccagggacattgtcgtcgacccgatcggaggtttcatgtactggaccgac
tggggtgccaacccgaagatcgagcgtgcgggaatggacgcctccagtcgcatagtcatc
atctcatccaatctgacttggcccaacgggctggctattgactaccagaccaaacgcctg
tactgggccgatgctggcatgaagactattgaatttggcaactttgatggttctgaccga
caggttttgattggcagccagctgcctcaccccttcggcctgactgtgcacgaggacaag
ctgtactggacagactggcagtccaagagcatccagagcgctgacaagctcaccggcttg
ggtcggcacacactggccgaaaacctggagaacctcatggacattcacatgttccaccga
caccgcgagacagtgcgtaacccttgtgcggtgaataatggaggctgcagccacctctgt
ctgctggctcctgctcccaaagcctccagctgtgcctgtcccactgggatcaacctgcag
acggatggaaagacctgcacgcctggaatgaacagcttcctgatctttgcacggaggacg
gacatcaggatggtttctctggatatcccctacttcgctgatgtggttctggctgttaat
agctccatgaaaaataccatcgccatcggtgtcgaccccaaagaagcaaaagtgtattgg
tctgacagtacactgaagaagatcagcagagccaacatcaatggaacagcacatgaagac
atcatatctacagggttggtgacaactgacggtctggcggtggacgctcgtggcaggaag
atctactggacagacacgggaaccaaccgcattgaggttgccaacctggacggctccatg
aggaaagttctcgtctggcagaacctggacagccctcgagccatcgctctctaccatgag
atgggttatatgtactggacggactggggagagcacgctaagctggagcgttcggcgatg
gatggatcagaccgcgtggtcctcatcagtaacaacttgggctggcccaacggcctggcc
atcgacatggccggctcacagctactgtgggctgacgctcacacagagggtattgaggcg
tctgacctgaacgggcagaatcgccgcaccctcgtgactccagtccagcacccgtacggt
ttaaccctgctggggtcccatatctactggaccgactggcagagccgcagcatccagcga
gccgacaagaacactggggccaacactatcacagtgcgggccaacctgccaggcctgatg
gacatccaggctgtagacagggagaaaccactgggttttaataagtgtggcaggaggaac
gggggctgcacccacctgtgcctgcctcgtcccaatggcacgtcctgcgcctgtcccacc
ggcatcttgctcaagggagacggcaggtcatgtgacgactccccggagacgtacctgctc
ttctccaaccgtgtcagtgtgcgcagaatctccctggacaccaacgaccacactgacgtg
cacgtaccggtgcccgagctgcacaatgtcatatcactggactacgacagcgtagacgga
aaactttactacactgatgtcaccctcgacgttatcaggcgtgcaaacctagacggcacc
gacatggagacggtgatcagtcagggcctgaagaccacggatgggctggctgtagactgg
gtggccagaaacatgtactggaccgacacgggacgcaacaccatcgaggtggcccgcctg
gatggaacgagccgcaaggtcctggtgaacaacagtttggatgaacccagagccatcgca
gtgttcccgagcaaagggttcctgttctggaccgactggggtcacatcgcaaagattgaa
cgatctcacttggacggctcggaccgaaaggtcctgatcaatacggacctaggctggccc
aatggtctcacgctagactacgacacacgaaggatcttctgggttgacgcccacttggac
aggatcgagagttcggacctaaacgggaaactgcgtcaggtccttgtcagcccggtgtcc
cacccgttcgccctcacgcagcaagaccgctggatctactggacggactggcagactaag
tccatccagcgggtggacaaacacaccggccgtaacaaggaaacggtgctggccaacgtg
gagggcctcatggacattatagtggtatcgcctcacagacagacggggaccaacctctgt
ggcgtgaataatggcggctgcactcacctctgcttcgcaaagaccaacagttttgtgtgt
gcctgccccgatgaaccagacgagcgaccctgctccaccatttcaggttacatccctacc
tctcctgccaaaggaaccagcagcactcctgtccccaacaagatccctaaagctccaaca
gacgctccgcacagaggaccctcactggtcaactgcactgacaagaacctgagtgtagaa
ggctgctcgagcaacgtggtgacggctcctcatggtgaaggcctccatatcagctacgtg
atcggtggagttctgaccatcctggctattctgatcctcatcgctgctttgatcatttac
agacataaaaagtcaaagttcgctgacccaggagtgagcaacctgacctacagtaacccc
tcctaccggacatccacgcaagaggtgaagatcgaggcgtcgcagaagcctccaatatac
aaccagcttcgatataagaaagaggggggagtggacggaggctacaccaaggaaaagatc
cgcattgtggaaggcgtgtgtctcctgtccaatgaggagctttactgggacgacctaaaa
cagatcaagccgtccagaggaggcctgcacacctgcatgcgcacagacaccgtgtccctg
caggccagcagtgcttcgctagatgatggcgagacggagcagctcctccaggaggaggcg
tccgaatgctcttccataaccaccctgactccttcagccatcaccccgcagcgtcacgcc
cagcacagcctgcccgacactggctggacctccacacgcaagccctctaccgagagcgaa
gtgtga
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integrated database retrieval system
