Seriola dumerili (greater amberjack): 111224121
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Entry
111224121 CDS
T05606
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdu03110
]
111224121 (clpb)
Chaperones and folding catalysts [BR:
sdu03110
]
Heat shock proteins
HSP100
111224121 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
AAA_5
AAA
Ank_5
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_16
AAA_24
bpMoxR
AAA_3
nSTAND3
YchF-GTPase_C
NACHT
ABC_tran
ATPase_2
RuvB_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
111224121
NCBI-ProteinID:
XP_022604249
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MLSSVPTRLIARRSRSLSPCSRVLQTSASGAACQGIRETPTEANRNPIVSTSRVSRRGIL
AEETSGSSVNLSVQYHHLAPRWLSNLENRRSSWAALANRGRNNNKYWEESGQSGGGEGRG
TGGGASRAGVASAGVLSAAAVAFCLKRDSDSKGDALLEAARTNNAQDVARLLNEGVDPNH
RHRLGWTALMVAAMNRQHSVVKVLVEAGADPNAGDNFNNVYDTSREKGIHSLEVLVSRED
EFSSRLSSRAGFRGCTALHYATLADDPHTVRMLLEAGANPLQTNGLGHTARAYAKEGEVS
TALQEWEGKFQEAQARREAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEE
HPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVG
HEEGGQLTKLLRACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDALFI
MTSNVASDEIAQHALQLRQEAEVVSRRKLADNLEDVQKSDDIKISRQFKESVIRPILKAH
FRRDEFLGRINEIVYFLPFCHSELLQLVSKELNFWAKKAKQRHDITLQWDRPVLDLLAGG
YNMHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLSVQSEGQEERSSLSLRLEVVG
EDSSPRTLDIRPPLSPEH
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttatcatctgttcccaccaggctaattgcgcgaaggtcgcgcagcctgtcaccgtgc
agtcgtgtgctccagactagtgctagcggtgcggcctgtcagggcatccgtgaaacaccg
acggaggccaaccgcaaccccattgtatccacctcccgcgtctcgaggagggggattttg
gctgaagagacctctggttccagtgtcaatctgtcagtgcagtaccaccacctcgcccct
agatggctgtccaacctggagaaccgtcgcagctcctgggcggctctggccaacaggggg
cgtaacaataacaaatattgggaggagagcgggcagagcggcggaggtgaaggccgggga
acaggtggaggagccagccgggcaggagtggcctctgccggtgtgctgtctgctgcagcc
gtggccttctgcctgaagagagactctgattccaaaggtgatgctcttctggaggcagca
aggaccaataacgctcaagatgtggccaggctgctaaacgaaggggtggacccaaatcac
cgccaccgtctcggttggaccgctctcatggtggctgccatgaaccgacagcacagtgtg
gtgaaggttctggtggaagccggtgccgacccaaacgccggagacaacttcaacaatgtt
tacgacacctcacgggagaaaggcatccactccctggaagtcctggtgtccagagaggat
gaattcagcagcagactcagcagcagggcgggtttccgcggctgcacagcgcttcactac
gccacactggcagatgacccacacactgtccgcatgctgctggaggcgggtgccaacccc
ctgcagaccaatggtttgggacacacagcacgggcctatgctaaggagggagaagtgagc
acagcactgcaggagtgggagggcaagttccaggaggcgcaggctcggcgggaggcagag
gagaggaggaggttccccctggagaggaggctgaaggagcacatcatcggacaggagggg
gccatcaataccgtagcctcagccatcaggaggaaggagaatggttggtacgatgaagag
catcctctcgtattcctcttcctcggttcatcaggaattggaaagacagagttggccaaa
caggtggcccgctacatgcacaaggacattaaaaagggtttcatccgtatggacatgtcg
gagttccaggaaaaacatgaggtggcaaagttcatcggctctccgccggggtacgtggga
catgaggaaggaggtcagctgaccaagctgttgagggcatgtcccaacgctgttgtcctg
tttgatgaagtagacaaggcccatcctgatgtactcactatcatgctgcagctctttgat
gagggtcgtctcacagacggtaaggggaagaccatcgaatgtaaagatgccctcttcatc
atgacgtccaatgttgcaagcgatgaaattgcccagcatgcactgcagctccgccaggaa
gctgaggtggtgagccgcagaaaactggctgacaacctcgaggacgtacagaaaagtgat
gacatcaaaatctcccgacagtttaaagaatctgtgattcgaccaatcctgaaggctcat
ttccggagggacgagtttctgggtcggatcaatgaaatagtttacttcttgccattctgt
cactcagagctgctacagctggtcagcaaagagctcaacttctgggccaagaaagctaag
cagcggcatgacatcactcttcagtgggatcgcccggtgctggaccttttggcgggaggg
tataacatgcattatggagcgcgctccatcaaacacgaggttgagcggcgggttgtcaac
cagttagctgcagcgtacgagcaggagctgctgccaaaaggctgcaccctgcgtctgtct
gtccaatcagaaggccaggaggagcggagctcactcagtctgcgccttgaggtggtagga
gaggacagctcgccaagaacgctggatattcgtccaccactcagccctgaacactaa
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