Seriola dumerili (greater amberjack): 111224187
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Entry
111224187 CDS
T05606
Symbol
neo1
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin
KO
K06766
neogenin
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04350
TGF-beta signaling pathway
sdu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111224187 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111224187 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111224187 (neo1)
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
DCC/UNC5 family
111224187 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
Tissue_fac
C2-set_2
Sp38
V-set_CD47
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
111224187
NCBI-ProteinID:
XP_022604321
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MAERGALSLLSLLCLTFLYTATTAAKHVDKGSAVQPFIPFWFTVEPQDTLAIRGSAALLN
CSAHSDAATPARIEWKKDGTFMSLSDERRHILPDGTLFFTHVVHSKHNKPDEGTYQCVAT
IDNLGSISSRTARLSVAGMPRFASQPAPTTVRLGDSQVVACEVNSDLVPFTRWEKDRQPL
EPSARLVQLPSGALVISNASEADAGLYRCMVENVGSSKSSDEAQLQILPETGEERKLEFL
VQPVSVTKVVGASVLLPCVVAGYPAPHVRWMFGDKLLQESEGRVEVLGGGSLQISNLTEE
DAGVYTCMADNSNATIEAQAQLTVQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTVK
WVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHGSG
GVASPAGPTPSAPRDVVASLVSTRFIKLTWRPPAEPHGDELTYSVFYSQEGTSRERVVNT
SRPGEMQVTIQNLMPDTKYRFRVVAHNSNGQGESSTALKVATQFXVQVPGPAPNLLAVSN
SPTSVSLSWDKPLTGNGEILTYKLYYTDKSVGNEEDIDIDGQSYTMTGLKKNTEYSFRVV
ANNKHGPGVSTEDIIVRTLSDVPSGPPQNLTLEVQNSKSIMLRWQPPPLNAQNGEITGYK
IRYRKGSRRSEAAETTGGTQLSKLIDGLERGTEYSFRVSAMTVNGTGPATDWTTAETFES
DLDESRVPDQPSSLHVRPLINSIVVSWTPPENQDIVVRGYTIGYGIGSPHAQTIKVDYKQ
RYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAITRPQSDPIDPDVDLYELFHAPYTPV
PDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKITDNRYYTVRWKTNIPANTKVKMA
NTTSLNHMVTGLKPNTLYEFSVMVTKGRRTSTWSMTAQGTTFETIPSSSPKDVTVVSKEN
KPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDWVIEPVVGNRLTHQIQELTLDTTY
YFKIQARNSKGMGPMSEAVNFRTPKTSNLLPKPGPPGSQNPDPGTSVGKSGVGSNSENHI
LVIVIIISVGAFTIIVVVVGAFLCTRRTTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDL
WIHHERLELKPMDKSPEPNPVMTETPIPRTSQDITPADSGLESNPHLQQRRNSYRGHESE
DSMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHQ
GSGHPRPHACATPISHLDRVDSTESVRNTPNTEPIPQATASSQVSCPSEILADPEGSYHG
STTTEEEPSYSSNLPPHRSAHPHAHAHPLKSFAVPAIPATSHPSYESPALPSTPLLAQTG
PPTHPHVVKTASIGTLGRTRTPMVVTVPNAPDVPETSKMLEDVDSSYEPDELTEEMAHLE
GLMKDLNAITTAP
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtcgctcctctctctcctctgtctcacctttctctacacg
gcgaccaccgcggcaaagcatgtcgacaaaggttcagcagtgcagcccttcatccccttc
tggttcacagtggagccccaggacacactggccattcggggcagcgcggcgttgctcaac
tgctcggcccacagcgatgcagccacgccggcacgcatagagtggaagaaagacggcacc
ttcatgagcctttcagacgagagacgacacatacttcccgatggcacgctcttcttcacc
catgtggtccactcgaagcacaataagcccgacgagggcacctatcagtgcgtcgccacc
atcgacaacctgggatccatttccagccggacggcacgcctttctgtagcagggatgccc
aggtttgccagccagccagcaccgaccactgtgcgtctaggggacagtcaggtggtggcg
tgtgaggtcaactcggatctggtgcccttcacccggtgggagaaagaccgtcagccactg
gagccgagcgccaggttggtccagctgccgagcggagccctggtgatcagcaacgcctcg
gaggccgacgctggcctctaccgctgtatggtggaaaacgtgggctcgtccaagtccagc
gacgaggcccagctccagatactgccagaaactggagaagagaggaagctggagttcctg
gtgcagcccgtgtctgtgaccaaggtggtgggcgccagtgtgctgctgccctgtgtggtc
gctggttatcctgcaccgcatgtccgttggatgtttggagacaagctgctacaagaaagc
gagggtcgagtggaggttctgggaggaggcagtctccagatctccaatctcacagaggag
gatgccggcgtctacacctgcatggcggacaattctaacgccaccattgaagctcaggcc
caactcacagtacaagttcctccgcagtttgtcaagcggccagccaacatttatgcccac
gagtccatggacatcgtttttgaatgtgaggtttcagggtcgccagctcccactgtcaaa
tgggtcaagaatggagatgctgtcatccccagtgactacttcaaaataattaaggagcac
aacctgcaggttctgggtctggtcaagtcagatgagggtttctaccagtgccttgcagag
aacgatgccggcaacatccagtccagcgcccagctcatcatcttggatcacggctccgga
ggtgtagccagtccagcagggcccaccccctctgctccccgagacgtcgtggcttcactg
gtttccacccgcttcatcaagctgacctggcgccccccagctgaaccgcatggagacgag
ttaacctactctgttttctacagccaggagggcacgagcagggagcgagtagtgaatacc
agccgtccaggggagatgcaggtcaccatccagaatctcatgccagacaccaaatatcgc
ttcagggttgtggcccacaacagcaacggccagggagagagctctacagcgctcaaagtg
gccacccagttttaagtccaagtgcccggccctgctccaaacctgctggctgtgtcgaac
tcgcccacctctgtctctctgagctgggacaagcctctcactggcaacggagagatcctc
acctacaagttgtactacacagacaaaagcgtcggcaatgaagaggacattgatatagat
ggtcagtcctacaccatgactgggctgaagaagaacacagaatacagtttccgtgtggtg
gccaacaacaagcacggtccaggtgtctccactgaggacatcattgttcgtaccctgtct
gatgtaccaagcggccctcctcaaaacctcactctggaggtccagaactcaaagagcatc
atgctccgctggcagccccctccccttaacgcccagaacggggagatcacgggctacaag
atccgataccggaaaggatcccggaggagcgaggcggccgagaccaccggaggcacccag
ctcagcaagctcattgatggtctggagcgtgggacagagtactccttccgggtgtcggcc
atgacggtgaacggcacgggaccggccactgactggaccacggcagagacgttcgagagc
gacctggatgaatcacgtgtaccagaccagcccagctctctgcatgtccgcccactcatc
aatagcatcgtggtgagctggacgccgccagagaaccaggacattgtggtgcgcggttac
accatcggctatggcatcggcagtccccacgctcagaccatcaaagtggactacaagcag
cgctactacactatcgagaaccttgaccccagctcccactatgtgatcacactgaaggcc
ttcaataatgtgggtgaggggattcctgtgtatgagagcgccatcaccagaccacagtca
gaccccatagaccccgatgttgacctgtacgaactcttccatgctccatacaccccagta
ccagacccctcccccatgatgccacccgtgggcgttcaagcctccgtgctgagccacgac
accatcaaggtgacctgggctgacaactcgctgcccaagaaccaaaagatcacagataac
cgctactacacggtgcgatggaagaccaacatccctgccaacactaaagtgaagatggcc
aacaccaccagcctgaaccacatggtgacgggtctgaagcccaacacactgtacgagttc
tcagtcatggtgaccaaaggccgccgcaccagcacgtggagcatgacagcgcagggcacg
acatttgagaccattcccagctcctctccgaaagacgtgaccgtggtgagcaaagagaac
aaacctcgcaccatcatcgtcaactggcagcctccctctgaggccaacggaaagatcacc
ggctacattatctactacagtacagatgtcaatgctgaggtccacgactgggttattgaa
ccggtggtgggaaaccgtctgactcaccagatccaggagctgacgctggacaccacctac
tacttcaagatccaggcccgaaactcaaagggcatgggccccatgtctgaggccgtaaat
ttccgcactccaaagacctcaaatcttctaccgaagccagggcctccgggcagccaaaat
ccggatcctggaacttcagttggtaaatcaggggtgggaagcaacagtgaaaatcacatc
ctggtcattgtcatcatcatctcagtgggagccttcaccatcatagtggtggtggtgggg
gccttcctgtgcacgaggcgcaccacgtcccaccagaaaaagaagcgggccgcctccaag
tcctcaaacggctcccacaaatacaagggaaactccaaagacctgaagccacctgatctt
tggattcaccatgaacggctggaactcaaacccatggacaagtcacccgagcccaaccca
gtcatgaccgagacgcccatcccccgcacctcgcaggacatcaccccggccgacagcggc
ctggagagcaacccccacctgcagcagaggcgcaactcctatcgtggccacgagtcagag
gacagcatgtctacactagcaggccgacgagggatgaggcctaaaatgatgatgcctttt
gacgcacagccacctcagcctgtgattagtgctcaccccatccattcccttgataaccat
catcaccattatcacatgggcagcctggcgtcgccaacacgaagctacctctaccaccag
ggcagcgggcacccacgcccgcacgcctgtgccacccccatctcccatctagacagggtg
gactccacagagtcggtgaggaacacccccaatacagaacctatcccccaagcgaccgcc
tcctcccaggtctcttgcccctcggagatccttgccgaccctgagggcagctaccacggc
tccaccaccacagaggaggagcccagctactccagcaacctgcccccacaccgctcagcc
cacccgcacgcccacgcccacccactcaagagcttcgctgtaccagcaatcccagccacc
agccatccatcatacgagtcgcctgctctgcccagcactcccctgctcgctcagactggg
ccccccactcacccccatgttgttaaaacagcctccattggaacactaggaaggacacga
acaccaatggtagtcactgtacccaacgcccctgatgtgccggagaccagcaagatgcta
gaagatgtagacagcagctacgagcccgacgagctgaccgaggagatggcccatctcgag
ggcctgatgaaggacctgaacgccattaccacagcgccatga
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