KEGG   Seriola dumerili (greater amberjack): 111224202
Entry
111224202         CDS       T05606                                 
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
  KO
K09335  visual system homeobox protein 1
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sdu03000]
    111224202 (vsx1)
Transcription factors [BR:sdu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    111224202 (vsx1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 111224202
NCBI-ProteinID: XP_022604339
LinkDB
Position
Unknown
AA seq 375 aa
MSIMTGREDVGEEKPKVKMLSPGFGIDKSRLHGSGFRSKGFAITDLLGLESDLQARQQPG
GAPGSGLSAACSGPGAEPQGASGGLGGFSFPGGSLPLGLGFLCSLAAQQPAGAPCFLPGH
LPLLQARADSHYLQNLEAQRDAYSDEECLSDRNDSKSSGNNQKRKKRRHRTVFTSHQLEE
LEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLY
GAMVRHSIPLPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMAKKCSSPRQSDSARS
DSFCDASERRGGGEARGVEREAVEEEEELLEEEEDMEEEVAIDLSSSSKQQQQEEGGRCA
SSPRRQSGGNSDEHS
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgagcatcatgacgggccgggaggacgttggcgaagagaagcccaaagtgaagatgtta
tctccaggatttgggattgataaatcccggctgcacggctccgggttccggtctaaaggc
tttgccatcaccgacctgctgggcctggagtcggacctgcaggcgcggcagcagcccgga
ggtgctccgggttcgggcctgtcggcggcgtgctccgggcccggggccgagccgcagggt
gccagcggcggcctcggagggttctccttcccgggagggtcgctgccgctcggcctcggc
ttcctgtgcagcctcgcggcccagcaaccggccggagcaccctgcttcctgcccgggcac
ctgccgctgctgcaggcccgggccgacagccactacctgcaaaacctcgaggcccaaagg
gacgcctactccgatgaggagtgtctctccgacagaaacgactccaaaagttcaggaaac
aatcagaagagaaagaagaggagacacaggacggtgttcacctcccaccagctggaggag
ctggagaaagcttttcacgaggctcattaccccgacgtctacgcccgagagatgctcgcc
atgaagacagagctgcccgaggacagaatacaggtgtggtttcagaatcggcgggcgaag
tggcgtaagcgtgagaagtgttggggtcgcagcagcgtcatggcggagtacggtctgtac
ggggcgatggtgcgacactccatcccgctgccagagtccatcctcaactccgccaagaac
ggcatgatgggatcctgcgccccctggctgctcggtgagccgcatgcacgaatgcacaaa
aagtctttagaaatggccaaaaaatgttccagtcctcggcagtctgactccgcccgctcc
gactctttctgcgacgcctcggagagacggggcggcggcgaggcccggggggtggagcgt
gaggcagtggaggaggaggaggagctgctggaggaggaggaggacatggaggaggaggtg
gccattgacctgtccagctcctccaaacagcagcagcaggaggagggagggaggtgcgcc
tcctcgccgcggcggcagagtggtggcaactcggatgaacacagctga

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