Seriola dumerili (greater amberjack): 111224202
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Entry
111224202 CDS
T05606
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111224202 (vsx1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111224202 (vsx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111224202
NCBI-ProteinID:
XP_022604339
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MSIMTGREDVGEEKPKVKMLSPGFGIDKSRLHGSGFRSKGFAITDLLGLESDLQARQQPG
GAPGSGLSAACSGPGAEPQGASGGLGGFSFPGGSLPLGLGFLCSLAAQQPAGAPCFLPGH
LPLLQARADSHYLQNLEAQRDAYSDEECLSDRNDSKSSGNNQKRKKRRHRTVFTSHQLEE
LEKAFHEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLY
GAMVRHSIPLPESILNSAKNGMMGSCAPWLLGEPHARMHKKSLEMAKKCSSPRQSDSARS
DSFCDASERRGGGEARGVEREAVEEEEELLEEEEDMEEEVAIDLSSSSKQQQQEEGGRCA
SSPRRQSGGNSDEHS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatgacgggccgggaggacgttggcgaagagaagcccaaagtgaagatgtta
tctccaggatttgggattgataaatcccggctgcacggctccgggttccggtctaaaggc
tttgccatcaccgacctgctgggcctggagtcggacctgcaggcgcggcagcagcccgga
ggtgctccgggttcgggcctgtcggcggcgtgctccgggcccggggccgagccgcagggt
gccagcggcggcctcggagggttctccttcccgggagggtcgctgccgctcggcctcggc
ttcctgtgcagcctcgcggcccagcaaccggccggagcaccctgcttcctgcccgggcac
ctgccgctgctgcaggcccgggccgacagccactacctgcaaaacctcgaggcccaaagg
gacgcctactccgatgaggagtgtctctccgacagaaacgactccaaaagttcaggaaac
aatcagaagagaaagaagaggagacacaggacggtgttcacctcccaccagctggaggag
ctggagaaagcttttcacgaggctcattaccccgacgtctacgcccgagagatgctcgcc
atgaagacagagctgcccgaggacagaatacaggtgtggtttcagaatcggcgggcgaag
tggcgtaagcgtgagaagtgttggggtcgcagcagcgtcatggcggagtacggtctgtac
ggggcgatggtgcgacactccatcccgctgccagagtccatcctcaactccgccaagaac
ggcatgatgggatcctgcgccccctggctgctcggtgagccgcatgcacgaatgcacaaa
aagtctttagaaatggccaaaaaatgttccagtcctcggcagtctgactccgcccgctcc
gactctttctgcgacgcctcggagagacggggcggcggcgaggcccggggggtggagcgt
gaggcagtggaggaggaggaggagctgctggaggaggaggaggacatggaggaggaggtg
gccattgacctgtccagctcctccaaacagcagcagcaggaggagggagggaggtgcgcc
tcctcgccgcggcggcagagtggtggcaactcggatgaacacagctga
DBGET
integrated database retrieval system