KEGG   Seriola dumerili (greater amberjack): 111224261
Entry
111224261         CDS       T05606                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04120  Ubiquitin mediated proteolysis
sdu04137  Mitophagy - animal
sdu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111224261 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111224261 (ubb)
   04137 Mitophagy - animal
    111224261 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    111224261 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdu04121]
    111224261 (ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdu04147]
    111224261 (ubb)
Ubiquitin system [BR:sdu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   111224261 (ubb)
Exosome [BR:sdu04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   111224261 (ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   111224261 (ubb)
  Exosomal proteins of colorectal cancer cells
   111224261 (ubb)
  Exosomal proteins of bladder cancer cells
   111224261 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 111224261
NCBI-ProteinID: XP_022604401
LinkDB
Position
Unknown
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctcactggtaagaccatcactttggaggttgagcccagt
gacaccattgaaaatgtcaaggccaaaatccaggataaggaaggcatccctccggaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gtgaagaccctcactggcaagaccatcaccctggaggtcgagcccagcgacaccattgag
aatgtcaaggccaaaatccaggacaaagaaggcatccctccagaccagcagcgtctcatt
ttcgccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccaccctccatcttgtcctccgtctgaggggaggcatgcagatcttcgtgaagaccctc
actggcaagaccatcaccctggaggtcgagcccagcgacaccattgagaatgtcaaagct
aagatccaggataaggaaggcatccctccagaccagcagcgtctcatctttgctggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaggagtccaccctccat
cttgtgctccgtctgagaggaggaaactga

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