Seriola dumerili (greater amberjack): 111224285
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Entry
111224285 CDS
T05606
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111224285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111224285
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111224285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
PAXX
DivIC
XLF
bZIP_2
HALZ
PH_4
Motif
Other DBs
NCBI-GeneID:
111224285
NCBI-ProteinID:
XP_022604432
UniProt:
A0A3B4TRQ9
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MRTSVCEIHVSSQPDSAYFLRVDWRGRGLGSGFQLLLTDGQDAWRGEVSEAAVRTEAEEL
EMQRERYIQDLQQALTGTGGSVTYSFTLTPSPPGPALTLAYEKVQKDISFRLGSVSLQAI
PEPAEAVRELLVHSLQRGNTLEHQNQNLEEENQRLRREQQRITAELKRYTGGKEALEAEL
YSRFILVLNEKKAKIRSLQETVTHLQETRSSEGQKNKESVKSGQTEGQEEGEDEYGGSTD
EEPEEEQSTPAPAAQSQDSSTPSPLDDSLRDITDVAPCRKRRVRHLAAPEPAVKRPTPQT
SKGRRSDSPAGSSKQPTPQRPADAAAARSEAEDLFEDF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtcagtgtgtgaaatccacgtctcctctcagcctgactccgcctacttcctg
cgggtagactggagggggcggggcttaggctctggcttccagttgctgctgactgacgga
caggatgcgtggagaggagaagtgagcgaggcggccgtgcgtacggaggcggaggagctg
gagatgcagagggagcggtacatccaggacctccagcaggcgctgaccgggacggggggc
tccgtcacctacagcttcaccctgacgccgtctccaccaggccccgccctcacactggcg
tatgagaaggtgcagaaggacatctcgttcaggttgggctccgtgtcgctgcaggccatc
cccgagccggcggaggccgtcagggagttactggtccacagtctgcagagggggaacaca
ctggagcaccagaaccagaacctggaggaggagaaccagagactgagacgagaacagcaa
cgcatcactgccgaactgaagcggtacaccggtggtaaagaggcgctggaggcggagctc
tactctcggttcatcctcgtcctgaatgagaagaaagccaagatccgcagtctgcaggag
actgtcacacacctgcaggaaaccaggagctctgagggacagaaaaacaaggagtcagtg
aaatcaggccaaacagaaggtcaggaggagggggaggatgaatatggagggagcactgat
gaggagccagaggaggagcagtcgactccagctcccgctgcacagtcccaggactcctcc
actcccagcccgttggacgacagcctgagggacatcacggacgtggccccctgccgcaaa
cgccgcgttcgtcacctcgcggccccggagcccgcggtgaaaaggccgaccccgcagacc
tcaaagggacgcaggagcgactcccctgcaggatccagtaagcagccgaccccccagcgc
cctgcagatgctgcggcagcgcgttcggaggctgaggacctgtttgaggacttctga
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