Seriola dumerili (greater amberjack): 111224316
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Entry
111224316 CDS
T05606
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sdu04054
]
111224316
Pattern recognition receptors [BR:
sdu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111224316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
TIR_2
LRR_9
LRR_EndoS
LRR_6
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
111224316
NCBI-ProteinID:
XP_022604474
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MGPGVKENETTATGGRKQFQLIIFLCLLNISSFVVPVRGFAMKNCKISYNIAICAQNKLR
AVPRDIPSTVEGFDLSANKISRVQISDFKNLPVLTKLELNRNFISQIDGGAFANLISLKK
LNLNNNKLVELREDLFNGLSNLTELRITSNRIRAVASTSFKSMISLKFLDISHNKLTATG
GRKQFQLIIFLCLLNISSFVVPVRGFAMKNCKISYNIAICAQNKLRAVPRDIPSTVEGFD
LSENKISRVQISDFKNLPVLTKLELNRNFISQIDGGAFANLISLKKLNLNNNKLVELRED
LFNGLSNLTELRITSNRIRAVASTSFKSMISLKFLDISNNKLHDVTKVHSIIQHLPQLRE
LYIQKNNFNTFHSWELTNSSLQLKYLDLSHNPISLFQITADVLPNLTWFNVGGSSQKMRW
DVHNKTFFSRVSTLDITGLQMSLNDMKTLLESVNSSLTSLRMNAMKQNLAALINISCSIP
TLSKLQLRNYKLSSVSSHLIKLCINVTELDLAVNQIQNISDNTFRSIQRLRILNLSRNNL
SSVPAATRNLPILQELDLSSNFISKLECDDFANQTMLRQLNLYQNSISALKDCVFKDLIR
LQVLKLHNNQMSKLHGAFNKYLPNLRLLLLDQNKLTAINNGEFRGLQSLQNLSLHHNQIQ
QLDKRCFIGLTNLSIILLQQNLITEKEINKGSFNDLINLKRLDFRENRIQYKNDSALPNA
PFSQLSRLETLAIPSQHRRLKSDLPRNFLQGLTNLRDLDIGTTQLLTLHKDTFIYTPQLQ
KLDLSSNEFRDLSPELFSPIPNLKSLYISRTILGSLDFLVNASLSKLEFLQARKNQYSVI
SEEIIRSVPALVYVDLQGNSFRCDCDNAWFIWWIENNNQTQVFDAYNFTCNYPVHLKGKE
LLELDVRSCSVDIEFIYFISTTCTVLLFMVVSFTYHFLRWHLAYAYYLFLALLFDTKHKN
KQAPNQYDAFISYNTHDEPWVVQELLPKLEGDQGWRLCLHHRDFEPGKPIIDNITDAIYG
SRKTICVISRRYLESEWCSREIQVASFRLFDEQKDVLIMVFLEDIPTHELSPYYRMRKLL
KKWTYLSWPRAGEHTELFWEKLRQALKTRDDRSEDIFQLTVSDRP
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagtgaaagagaatgaaacaacggcaacaggaggaagaaaacaatttcaa
ctcataatttttctctgcttgttgaatatcagcagttttgttgttccagtcagaggattt
gcaatgaagaattgcaaaatcagttacaatattgccatatgcgcccagaataaactcaga
gctgttcctcgagatattccctcgacagtagagggttttgacttgtctgcaaacaaaatt
tcaagagtacaaatatcagatttcaaaaatctaccagttttgacaaaattagaactaaat
cgcaacttcatttcgcagatagatggcggcgcctttgccaatctgatttccctcaagaag
ttaaatctaaataataataaacttgttgaactcagagaggatctttttaatggtttgagc
aacctcaccgagctcaggattactagtaatcgcatcagagctgtggcgtccacgtctttc
aagtccatgataagcttaaagtttctggacatttctcacaacaaactaacggcaacagga
ggaagaaaacaatttcaactcataatttttctctgcttgttgaatatcagcagttttgtt
gttccagtcagaggatttgcaatgaagaattgcaaaatcagttacaatattgccatatgc
gcccagaataaactcagagctgttcctcgagatattccctcgacagtagagggttttgac
ttgtctgaaaacaaaatttcaagagtacaaatatcagatttcaaaaatctaccagttttg
acaaaattagaactaaatcgcaacttcatttcgcagatagatggcggcgcctttgccaat
ctgatttccctcaagaagttaaatctaaataataataaacttgttgaactcagagaggat
ctttttaatggtttgagcaacctcaccgagctcaggattactagtaatcgcatcagagct
gtggcgtccacgtctttcaagtccatgataagcttaaagtttctggacatttctaacaac
aaactgcatgacgtaacaaaagttcattcaataatacagcatctgccgcagctacgagag
ttgtacattcaaaagaacaattttaacacttttcactcgtgggaactgacaaacagctca
ctacaacttaaatacctcgatttgtctcataatccaatctcactttttcagatcactgca
gatgttttaccaaatctgacctggtttaatgtcggtggctcttcccagaagatgagatgg
gatgtgcataacaagactttctttagtcgagtgtctactcttgacattaccgggcttcaa
atgtctttaaatgacatgaaaacattactagagagcgtaaactcctcactaacgtctctg
aggatgaatgcaatgaaacaaaaccttgcagcgctgatcaacatttcctgttccatccca
acattgtccaaactgcaactccgcaattacaaactcagctctgtcagttcccatttgatt
aagttgtgcatcaatgtaactgagttagatttagcagttaatcaaatacaaaacatcagt
gacaacaccttcagatctattcagagattaaggatcttgaatctgagtcgcaacaacctt
tcatctgttccagctgccacgaggaatctaccgattcttcaagaattggatctgagctct
aatttcatcagcaaacttgaatgtgacgattttgccaatcagacaatgcttagacagctc
aacctttatcagaattcaatctcagctctaaaagactgtgttttcaaggatttaatacga
ttgcaagttttgaagttacataacaaccaaatgtccaagttacatggtgccttcaacaaa
tacctgccaaaccttagactactgctattggatcaaaataaactcactgccattaataat
ggagaattcaggggcttacagtccctccagaacttgtcattacatcacaatcaaatacag
caacttgataaaaggtgtttcattggattgacgaatctttctattattctactccagcag
aatcttatcacagaaaaagaaataaacaaaggtagtttcaatgatctgataaatttaaag
agattggacttcagggaaaatagaattcaatataaaaacgattcagctttgcctaatgca
ccattttctcagctgtcccgtctggagacattggctattccttcacaacaccgcaggctg
aaatctgacttgcctcgcaacttcctgcaaggattgacaaatctgcgggatctcgatatc
gggaccactcaacttttaaccttgcacaaagacacgtttatttacacacctcagctgcaa
aaacttgatcttagctcaaatgaatttagggatctctctccagagttgttttccccaatt
ccaaaccttaaaagtctttacatatctagaacaattcttgggtctctagattttcttgta
aatgccagcctttccaaactggagttcttgcaggcgagaaagaatcaatattcagttatc
agtgaggaaataataaggtctgtaccagctcttgtttatgtggatcttcaggggaacagt
ttcaggtgtgactgcgataacgcctggtttatctggtggatagaaaacaacaaccaaaca
caagtttttgatgcctataactttacctgcaactaccctgtgcaccttaaaggcaaggaa
ctgttggaactcgacgtccggtcctgctcagtagacattgaattcatctactttatctcc
accacatgtacagtcctactgtttatggtggtgtccttcacctaccatttcctgaggtgg
cacctggcctatgcctactacctcttcttggctttgctctttgacacaaaacacaaaaac
aagcaagctcctaatcagtatgacgccttcatctcctacaacactcatgatgagccctgg
gtcgtccaagagctgctgcccaaactggagggagaccagggctggagattgtgtctgcac
catcgagactttgagccaggtaaacccatcatagacaacatcacagatgccatttatgga
agcaggaagaccatctgtgtgatcagtcgcagataccttgagagtgagtggtgctccaga
gagatccaggtggccagcttccgtctgttcgacgagcagaaggacgtgctgatcatggtc
tttctggaggacattcccacccatgagctgtctccttactaccgcatgaggaaactgctg
aagaagtggacctacctgagctggcctcgagccggagagcacacggagctgttctgggag
aaactccgccaggctctgaagaccagagacgatcgcagtgaggacatcttccagctcact
gtgtcagacagaccgtga
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