Seriola dumerili (greater amberjack): 111224367
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Entry
111224367 CDS
T05606
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04110
Cell cycle
sdu04218
Cellular senescence
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111224367 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111224367 (rbl1)
04218 Cellular senescence
111224367 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111224367 (rbl1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
111224367 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
111224367
NCBI-ProteinID:
XP_022604552
UniProt:
A0A3B4U428
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTAAAAMENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMRKWADMSNLHQDF
RLRMERLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRAD
GHISADEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFQKQILRGNGELLTELLD
PQNFIDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQEPSASQTTNQSQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRTAPSDHLMSI
LKSCSRNPTESILARVKTLGQTFKEHYTNDSEDTPGSHMDFAENRLKLAEILYYKILENV
MVPETKRLQGKDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISIFKLAPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWSADSALWSALQAAGNKVPTVEEVNFSS
CLDTGSASGSSGGGQSHLPLVALSPIIHPRIREFRSGLGSARKDVPPSPLSVHDRYSSPA
AGSAKRRLFGDDPPAPTSGLNPSLSPVSSPAKRLTFGTSATLRIGGQGSQTTVLSIPLQG
VNNDRTIALIPVQPCDSSGTVTAQFLLTASPSRAPAAAPTASDPQTGASRPRRTGSLALF
FRKVYHLASVRLRDLCVRLDISSELRGKIWTCFEHALVHCTDLMKDRHLDQLMLCCVYII
SKITKETHTFQDIMKCYRSQPQANSHVYRSVLLRHTPREQVADENMEVDPVSGGESAEKT
NQAPGEANSDQSGVEERGDLIQFYNTVFVLKMKSFALRYATHDSRTDAPPLSPFPSVRAQ
PLSPRRVSQRHSLYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGCVSRKRAF
TMEGDVMMSSAACDSPSKRACPENGSSPDVLLKRLQDVVSERQSR
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcgaagagtcgtcggattcggagtcggggaggatggaggagagttcggtccgg
aggagtttggagacgttgtgtcaggagctgaacatggacgaacagactgccgctgcggcc
atggagaacttcactgccatatggaatacatacaccctggagggggaggtggtccactgg
ctggcctgttcgctctacgcagcctgcaggaagggatctacccccaccgtgggtaaaggg
ctgatggagggaaactgtgtctccctcaccaggatcctccgctcctccaaactcagtctg
atccagttcttctctaagatgaggaagtgggccgacatgtccaacctccatcaggacttc
aggctgcgaatggagcggctggagcgcaactttgaggtttccacggtgatcttccgcaag
tttgagcccatcttcatggacatgtttcagaacccacagggaggcgagccgccacggcag
ccgcgcagcagaaagcacaggcggctgccctgtcacatcagtgatgtgttcaagttctgc
tggacgctgtttgtctacaccaaaggtaacttccgtatgatcggtgacgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgtttggaaatgctctgctgtgtgcc
aacaggaaggacctgatcaacccgaccttcagaggtctgcctgctctgtatcgcgctgat
ggtcacatttcagcggacgagcctcctccctgtgtgttggagaggttgtgtgagctgcat
gacggactggtggtggaagcgaagggcatcaaacagcactacttcaaaccgtacatacag
aaactgtttcagaagcagattctgagaggtaacggggagctgctaacagaactgttggat
cctcagaacttcatcgataacaataaagccataaacagggagtacgaggagtacgtgttg
acggtgggagattttgatgaacgagtgtttctgggagccgacgccgacgaggaaatagga
accccgaggaagattgttcaggaaccgtccgccagccagacgaccaatcagagccagctg
cagcagcatgtagagaagtccggctctctcgctccctccacccctctgaccggacgggtt
tacctgaaggagaaggacctgctcgtcacgcccgtctcctcggcaacgcagagcgtcagc
cggctgcagagcatggtggccgggctgaggacggcccccagcgaccacctgatgtcaata
ctcaagtcgtgctccagaaatcccacagagtccatactggccagagtgaagacactggga
caaaccttcaaagaacattacaccaacgactcggaggacacacccggatctcatatggac
ttcgcagagaaccgtctgaagctggctgagatcctctactacaagatcctggagaacgtg
atggttccggaaaccaaacggctgcagggcaaagacatgagtgtgttgttggagcaggac
atcttccactgctccctgatggcgtgttgcctggaggtggtgttgttctcctacagctcc
cagagaaccttcccatggatcatcagtatcttcaaactcgccccgttctacttcttcaag
gtgatcgaggtgtttatccgctcggaggaaggtctgtccagagacatggtgaagcacctg
aactcgatcgaggagcaggttctggagagcagagcgtggagcgcagactcggccctgtgg
agcgccctgcaggctgctgggaacaaagtccccacagtggaggaggtgaatttttcctcc
tgtctcgacaccggttctgcttccggttccagcggtggaggtcagtctcacctgcctctg
gtcgccctctctcccatcatccacccccgcatcagggagttcagatcagggctgggcagc
gcccgcaaagatgtgcctccctctccactttcggtccacgacaggtacagctctcctgca
gccggcagcgccaagcgccgtcttttcggcgacgaccctccggccccgacgtcgggactg
aaccccagcctgagcccggtgtcgtctccggccaagaggctgacgttcggcacgagcgcc
accctgaggatcggaggtcagggtagccagaccaccgttctcagcatcccactgcaaggt
gtgaataatgaccgcaccatcgcactgatcccggttcagccgtgtgactcctccggtacc
gtcactgctcagtttctgctcaccgcctccccgagccgagcccccgccgccgcacccacg
gcctccgacccccagacaggagccagtcggccgcgacgcaccggatcactcgccctgttc
ttcaggaaggtgtatcacctggccagtgttcgtctgagggatttgtgcgtgaggttggac
atctcatcggagctgcgtgggaaaatctggacgtgtttcgaacatgctctggtccactgc
actgacctgatgaaggacagacacctggaccagctgatgctctgctgtgtttacatcata
tccaaaatcaccaaagagactcacaccttccaagacatcatgaagtgttaccgcagccaa
ccacaggccaacagccatgtgtaccgcagtgtgttgctgcgtcacactcccagggagcag
gtggctgatgagaacatggaggtggatcctgtttctggtggcgaatctgccgaaaaaacc
aatcaggctccgggagaagcaaactccgaccaatcaggcgtggaggaacgtggcgacctc
atccagttttacaacaccgtcttcgtcctgaagatgaaaagcttcgctctgcgatacgcc
acccacgacagccggacggacgctcctcctctctctccgttcccgtcggtccgggctcag
cctctctctccccgccgagtctcccagagacactcgctgtacgtctccccccacaagaac
tcagccggctgcctcacccccaactcctacacctacaggatcaacagcagcccgtccaag
gagttgtcagacatcaaccggatgatcaggcagggctgtgtgagcaggaagagggccttc
accatggagggcgacgtgatgatgtcatcagcggcgtgcgactcccccagcaagagggcg
tgtccggagaacggcagcagcccggacgtgctgctgaagcgtctgcaggacgtcgtctcc
gagcgtcagagtcgctga
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