Seriola dumerili (greater amberjack): 111224419
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Entry
111224419 CDS
T05606
Name
(RefSeq) breast cancer type 2 susceptibility protein-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03440
Homologous recombination
sdu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111224419
03460 Fanconi anemia pathway
111224419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111224419
03036 Chromosome and associated proteins [BR:
sdu03036
]
111224419
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111224419
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111224419
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
111224419
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111224419
FA (Fanconi anemia) pathway
Downstream FA components
111224419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
AAA_33
BRCA-2_helical
AAA_18
Viral_helicase1
KTI12
AAA_16
DUF5906
RF-1
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
111224419
NCBI-ProteinID:
XP_022604613
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MERSFPETMGSLRLTPEQVLLQLKYRYDVEIDHSRRPALRKIMEKDDTAAKTLVLCVCGI
VSRGQSPNRQSRNDTKTPQGADAKVESPSAVVWLTDGWYAIKAQLDEPLTAMLHKGRLAV
GWKLIIHGAQLVGSQDACSPLEAPESLMLKICTNSSRPARWDTKLGFHRDPRPFLLPVSC
LYRNGGPVGCVDITILRSYPLQWMQRKPDGGVVFRSVRAEEKEARRYSSHKQKAMEILFA
KIQTEFEKEEKGNNKPQRRRRTISRQDIANLQDGEELYEAVGDDPSYLEAHLSEQQLETL
QTYRRSLMEKKQADLQDRYRRALEAENDDGGCPKRDVTPVWRLHIADSMGQPGSVYQLNL
WRPSSDLQSLLKEGCRYKVYNLTTSDGKKRSSIETVQLTGTKKTQFQDLQASQEWLMARF
QPRVSTNFVNIQNPEFQPLCGEVDLTGYIISVIDGQGSSPAFYLADGRLNFVKVRCFSSF
SQSGLEDVVKPRVLLALSNLQLRGQSTCPTPVVYAGDLTVFSTNPKEVHLQESFSQLRNL
VQSQENFFPTCEEKLSHLVKSNGLSSICSPALQPQTPACTSDRRQDTSLVCQQPIRSLGS
FTPVSRNPPAATPSTEKDPKSLKRRRALDYLSRIPSPPSLAHLGAVASPSVNKTFNPPRR
SGTPSTLKTVQTPARKPVVPQVEDEWVNDEELAMIDTQTLLAGGLLLTGLIKVEKLPMSY
TESSCSASPDVESSCVGESTEGGRDDSADKNTVCVSSDCISRDSSVRERVLKEVGLTSTT
FIGPAFPPEIATIKSGIEDTLSEFYKELEKIDTPDDANGNPGKQGKCFVQPPSPPKTSTS
KQTQDVRKEKSVHAMKSEKSDGFWKSSGQNQPSWPHWYQNKPYYPRRPRPGMDPSFGRAA
PTQNHWNYPQPLDRPPNPRLHTPPFHHAPPPSAFPNPQNPPPHMNHNWRSSGMPNQYQEE
AHFPTFSSFPSQNVYSPPTQGYYGDYPHHLDRDERGCSYDTYSDDVNRGWPRDREEEWSQ
FDEDNDRGQRFVSENELWKQQHHCRSSDNSHASSSSLVLILMRGLPGSGKSTLARELLTT
GPSGLILSTDDYFAQKNGYRYEPGLLGVAHEWNQSRAKDAMHDCRSPIIIDNTNIQAWEM
KPYVKMALERGYKVDFCEPDTSWKLDPYELEKRNKHGVPQEKIMQMLDRFSFPISIDIVM
SSPEPPHVNQRRRPEHAQTMRRNRDFC
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatcttttccagaaacaatgggaagcctccgtctcacgccagagcaggttctc
ctacagctcaagtacagatatgatgtggagatcgaccacagccgtaggccagctctgagg
aagataatggaaaaggacgacacagcagccaaaaccctggtgctctgtgtttgtgggatc
gtctccaggggtcaatccccaaacagacagagtcgtaatgacaccaagactccacaagga
gctgatgccaaggttgaatccccatctgcagttgtttggctgacagacggatggtacgcc
attaaagcccagctggatgaacctttgactgccatgcttcacaaaggtcgactggctgtc
ggatggaagctgatcatccatggggctcagctggtgggatcacaagatgcttgctcacct
ctggaggcacctgaatcgctcatgttaaagatttgtaccaatagcagcagacctgcacgg
tgggatactaagctgggatttcacagagatccccggccattcctgcttcctgtctcctgt
ttgtatagaaatggagggccagtaggatgtgtggacattaccatactaagaagctacccc
ctacagtggatgcagaggaaaccagatgggggcgttgtgttccgttctgttcgtgcagaa
gagaaggaggcgagacgatacagcagccacaaacagaaggccatggaaatcctttttgcc
aagattcaaactgaatttgaaaaggaggagaaaggtaataacaaacctcaacgcagaaga
cggacaataagtcgtcaggatattgcaaatctgcaagatggagaggagctgtatgaagca
gtgggggatgacccatcttaccttgaggctcatttgagtgaacagcagttagagactcta
caaacctaccgtcgctctctgatggagaagaagcaggctgatctgcaggatcgataccgt
cgagctctggaagcagaaaacgatgacgggggctgtcctaaacgagacgttacacctgtg
tggagactccacattgctgactccatgggccaacctggcagtgtttaccagttgaatctc
tggcggccttcctcggatctacagtctttactgaaagaaggctgtcgatacaaagtctat
aacctcaccacttcagatggaaagaaacgcagcagcattgaaactgttcaactcactggg
acaaagaaaacacagtttcaggacctacaggcttcccaggagtggttaatggcacgtttt
caaccgagggtttctaccaattttgtgaatattcaaaacccagaattccagccgctgtgt
ggagaggttgatctcacaggatatatcatcagtgtcatagacggacagggttcctctcct
gcattttatttggctgatggaagactgaactttgttaaagtgcgctgtttcagcagcttt
tctcagtctggcctggaagatgtcgtaaaaccccgtgtgctgttggctctgagcaacctg
cagctcagaggtcagtccacatgtcccactcctgttgtgtacgctggagatctgaccgtc
ttctctacaaaccccaaagaggttcatctacaggaatcctttagccagctcagaaacctg
gtccagagtcaggagaacttttttccaacttgtgaggagaagctttcacatttagtcaag
tctaatggcctgagctccatctgttctccagctctgcaaccacaaaccccagcttgcaca
tcagacagaagacaagacacaagtctggtatgtcagcagccaatcagaagccttggatcc
ttcacacctgtcagcagaaaccctcctgcagcaaccccttcaactgagaaagaccccaaa
agcctgaagaggagaagagctttggactatctttctcgtatcccgtctccaccatctctc
gcccatctgggcgcagtggcttctccaagtgtaaataagacattcaacccccctcggagg
tctgggacaccaagcactttaaaaactgtacagactccagctcgcaaacctgttgttccg
caggtggaagatgaatgggtgaatgacgaggaactggcgatgattgatactcaaacattg
cttgctggtggtttacttctcactggactaattaaagtggagaaattgccaatgtcttac
actgaatcctcctgttcggcctctcctgatgtagaaagctcttgtgtgggtgaaagtact
gaaggtggtagagatgactctgctgacaaaaacactgtttgtgtgagcagtgactgcatc
agtcgggacagcagtgtgagggagcgtgtgttaaaggaggtaggactcaccagcaccact
ttcattggtccggcatttcctccagaaatagccacaatcaagtctggcattgaagacaca
ctgagcgagttttataaagagcttgagaagatcgatacacctgatgatgctaatggtaac
ccagggaaacaaggtaaatgttttgttcaaccaccctcacctccaaaaacatctaccagc
aaacagactcaggatgtacgcaaggagaaaagtgttcacgcaatgaaatctgaaaaatct
gacggcttctggaaaagcagtggacagaaccagccatcctggcctcactggtatcaaaat
aagccatactaccccagaaggccgagaccaggcatggacccgagttttggtagagctgct
ccaactcaaaatcactggaattatcctcaaccactggacagaccaccaaacccaagatta
catacacccccattccatcacgcaccacccccatctgcattcccaaatccacaaaacccg
ccaccacacatgaatcataactggagaagttcaggcatgccgaaccagtatcaagaggag
gcgcattttccaacattttctagcttcccatctcagaatgtatacagtccccccactcag
ggctattatggagattatccacatcacttagacagggacgaacggggttgtagctacgac
acatactcagatgacgtaaataggggatggcctagagacagagaagaagagtggtctcag
ttcgacgaagacaatgacaggggccagagatttgtttctgaaaatgaactctggaagcaa
cagcatcactgccgatcttctgataactctcatgcatcctcttcttctttggtgctgatc
ttaatgaggggattgccaggatctgggaaatctacactggccagggagctgctcaccact
ggtcccagtgggctgatactgagcacagatgactactttgctcaaaagaatggctaccgc
tatgaaccaggccttcttggcgtggcccatgaatggaaccagagcagagctaaagatgct
atgcatgattgccggtctccaattattattgataatacaaacattcaagcctgggaaatg
aagccatatgtcaaaatggccttggagagaggatacaaagtggacttctgtgaacctgac
accagctggaagttggatccttacgagcttgaaaagaggaacaaacatggtgttccccag
gagaagatcatgcagatgctggatcgcttttcatttcccatatccatagacatcgtcatg
agttcaccagagccgcctcacgttaaccagagacgtcgaccagagcatgcgcagacgatg
aggagaaacagagacttctgttag
DBGET
integrated database retrieval system
