Seriola dumerili (greater amberjack): 111224465
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Entry
111224465 CDS
T05606
Symbol
wdhd1
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111224465 (wdhd1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111224465 (wdhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_THOC3
Ctf4_C
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
HMG_WDHD1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WDR55
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
HMG_box
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Tricorn_2nd
KNTC1_N
DUF6476
Motif
Other DBs
NCBI-GeneID:
111224465
NCBI-ProteinID:
XP_022604688
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MPCERKPMRYGHSEGHTEVCFDDQGKFIVTCGNDGDVRIWESLDDDDPKFITVGEKAYSL
ALKNNKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVAFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDDFLASSSCDGSVVVWSIEEQAQVISWPLLQKT
NDVSNAKSLCRLAWQPGAGKFLAVPVDTKVHLYERGSWDHVSTLSDDLLTQPINVVAWSP
CGQFLAAGSVGGSLTVWDVNSKLSVERQRHEKGFTVCGLAWHPSAGQIAYTDTEGCLGLL
DGLSTSTPDSSAAKQAPVKKPAKDYDDLFDDDDDGVMDEGVSDTNSPAKKHVAGDDDDDD
DFLMPATGRVRNRGAILDDENSVDAASLKLGQDRFGDDDDAGSAVVAASAPLVPLRPVYE
GPMPTPPQKAFQPGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAMHLT
NSLGHIMADLSQEAVLLACPSTEELASKLQCLHFSSWDTNKEWMVDLPKGEDARALCVGQ
GWAAVATSTLMLRLFSIGGLQREIISLPGPVVCMAGHGEQLLIVYHRATGFDGEQALGVQ
LLQFGRRKRQIINGEPLPLSHKSYLSWLGFTAEGTPCYVDSDGVVRMLNRSLGNTWTPVC
NTRETCKSKSDHYWVVGVHENPQQLRCIPCKGSRYPPTLPRPAVGILPFKLPLCQTSTEK
GQMEEQFWRSVLFHNHYSFLSSSGYEIDEDGQSKSQKEQQELLMKMFALSCKLEREFRSV
ELAELMTQNVVTLAIRYASRSRRMALAQRLSEIALEKANQIQEEEPEEREEEPQYSSVRQ
NSGYGQSEVAAGRHGNRHNQEEEEEQGEXLGEEEDGQEMETEESTETKKRMNPFAKEAGS
PVQPSLTPIGKAGRANPFKVSGKASTPSGQPRVTNILDNMTSSRKSAPHSGAAGKPNKSP
VLKPLAPRAKAKTQSTLLQMTATKAANKKTEENTEPAAEQQKQPEVPPPASPAESAENKR
PKTGFQLWLEENRKSILADQPDLEETDVIKEAMGRFRTLSADERLSWTNRAKGQTGDAAD
LKKRKRGGGGDGENENGQTKVDENSAKKKKSLDPSSKLSAFAFNKN
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtgagaggaagccgatgcgctacggccactcggagggtcacaccgaggtctgc
ttcgatgaccaggggaagttcatcgtaacttgtggaaatgatggagacgttcggatctgg
gagagtctggatgacgacgatccaaagttcatcactgttggtgaaaaggcgtactctctc
gcactcaagaacaacaagctggtgacggcgagttccaacaacacagtgcagatccacacg
tttcctgatggtgatccagacggcatcctcacccggttcaccaccaacgccacacatgtc
gccttcaacagcagcggctcgagagttgctgccggatccagtgacttcatggttaaggtg
gtggaggtgtcggacagcagccaacagaaaacactccggggccacgaggcacctgtcctc
agtgtcacctttgaccccaaagatgacttcctggcgtcttccagctgcgatggctctgtg
gtggtgtggagtatcgaggagcaggctcaggtgatcagttggcctctgctgcagaagacc
aacgacgtcagtaatgcaaagtctctgtgtcggctggcctggcagcccggggcgggaaag
tttttagcggttcctgtcgacacaaaggtgcacctgtacgagcgaggctcctgggatcat
gtgagcactctgtccgacgatctgctcacacagcccatcaacgtggtggcctggtctccg
tgtggtcagttcctggcagctggcagcgtggggggttcactgacggtgtgggacgtgaac
agcaagctgagtgtggaaaggcagaggcacgagaaaggcttcaccgtgtgcggtttggcc
tggcacccgtcagcaggtcagatcgcctacacggacacagagggctgcctgggcctgctg
gacggactcagcacctccacacccgactccagcgccgccaagcaggcaccagtgaaaaag
ccagcaaaagactatgatgacctgtttgacgatgacgatgatggagtcatggatgaagga
gtgagcgacaccaactcgccagcgaagaaacatgtcgccggggacgacgacgatgacgac
gatttcctcatgcccgcgaccgggcgggtgaggaacagaggggcgatcctcgacgatgag
aactcagtggacgcggcgtcgctgaagctcggccaggacagattcggggacgacgatgac
gcgggcagcgctgtggtggctgcatctgcccctctggtgcccttacgtcccgtctatgag
gggcccatgccaacgcctccccagaaggccttccagccgggctccacccctgcgcacctc
acacaccgcttcatgatgtggaactcagtgggaatagtgcgaggttacaatgacgagcag
gacaacgccatcgacgtggagtttcacgacacggccgtgcaccacgccatgcacctcacc
aactcgctgggtcacatcatggctgatctttcccaggaggccgtgctgctggcctgcccc
agcacagaggagctcgccagtaagctgcagtgcctccacttctcatcatgggacaccaat
aaggagtggatggtcgacctgccgaagggcgaggacgcgagggcgctgtgtgtgggtcag
ggctgggcggcggtcgccaccagcacgctgatgctccgactcttctccatcggaggcctt
cagagggaaatcatcagcctgccggggcctgtggtctgcatggccggacacggagagcag
ctgctgatagtctaccaccgggccacaggttttgacggggagcaggctctgggcgtccag
ctgttgcagttcggtcgaagaaagaggcaaatcatcaacggagaacctctgccactttct
cacaagtcctacctgtcctggctcggcttcactgccgagggtaccccttgctacgtggat
tcggatggggtggtacggatgctgaaccgctccctgggaaacacatggacgccagtgtgc
aacaccagagagacctgcaaaagcaaatcagaccactactgggtggtcggagtgcacgag
aaccctcagcagctcaggtgtattccatgcaaaggctccaggtacccccccaccctgccc
agacccgccgtgggcatcctgccgttcaagctgccgctgtgtcagaccagcacagagaaa
ggacagatggaggagcagttctggcgttcagtcctcttccacaaccactacagcttcctg
tcgtccagcggctacgagatagacgaggacggacagagtaaatcccagaaggagcaacag
gagctgctcatgaagatgtttgcattgtcctgtaagctggagagggagtttcgctccgtg
gagctggcggagctgatgactcagaacgtggtgactctggccattcgctacgcgtcccga
tccagacgcatggccctcgcccagcggctcagtgagatcgcactggagaaggccaaccag
atccaggaagaagagccagaggagcgggaagaggagccacaatactccagcgtcaggcag
aactctgggtacggccagagcgaggtcgcagcaggacgtcacggcaacagacacaatcag
gaggaggaagaggagcaaggagagtagctcggtgaggaagaggacggacaggagatggag
acggaggagtcgacggaaaccaaaaaacgtatgaatccgtttgctaaagaagcaggatca
cctgtgcagccgtctctgacaccgattggtaaagcaggacgtgcaaatcctttcaaggta
tctgggaaagcgtcgactccgtctggtcagcctcgagtcacaaacatcctggacaacatg
acgtccagcaggaagtcggctccacacagcggagctgcagggaaaccaaacaaaagtccc
gtcctcaaacctctggcccccagggccaaggcgaagactcagtccacgctgctgcagatg
accgccacaaaagcagccaataagaagactgaggagaacacggagccggcggcagagcag
cagaaacaaccagaagtcccgcctccggcttcaccagctgagagcgctgaaaacaagagg
ccgaagacgggcttccagctgtggctggaggagaacaggaagagcatcctagccgaccag
cctgacctggaggagaccgatgtcatcaaagaggccatggggcgattcaggacgctgtca
gcagacgagcggctgtcatggacaaacagagcaaaaggccaaactggagatgcagcagat
ctaaagaagaggaaaagaggaggaggaggagatggagaaaatgaaaatggacaaactaaa
gtggatgaaaatagcgccaagaagaaaaaatctttggatccctcctctaagctttcagca
tttgcatttaacaaaaactaa
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