Seriola dumerili (greater amberjack): 111224475
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Entry
111224475 CDS
T05606
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111224475
03041 Spliceosome [BR:
sdu03041
]
111224475
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111224475
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
111224475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111224475
NCBI-ProteinID:
XP_022604695
UniProt:
A0A3B4UE66
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFTDTFQNLYRCPEDDKSKIVRVLNLWQKN
GVFDMDIIQPLMDMANGAIVPPPALQVPADPQPEIQPAITSASAVPAVPQLPSPDALAAV
AQLFQSPHGQELQRVLQNFQQADKTLAAAIANNIPNPPQMPVAQLNPYSAHTEKKSSLAE
KLLDRFDYDDEPEDITPKELNAQSQCIPENVFNHFPGQMPNAENVHPHMMGQTGGIEHSG
GMSHGEHHMIPDGCHSINEAYSHSRGNLREDPNMRREGRHRGYGRRSRSRSGSRSPRRRR
SRSSSRSRRSRHRRSHSRSREQRWRSRSRSQDRSERERDRERRQKGLPSMKSQTLSVCTT
TLWVGQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKLSRGSY
KVNQKPVKIAWALNKGIKSAHKKFWDVDRGVTYIPWSKVKIEELESYREGGMLDTETLNP
EWNNARDLNKQATVNGALESVPADGTIPAHIQVPAVQQAAPIRSPPAFPGPIMLSPTAMP
PGGAPFIPPEFDPSKLAPAGSLKPPEDSTKDSNREKGTLSDAGSDNQLGSPVAPVMTLPG
PAVIQGPRPGMPPLQPPPGMPNPHLPPFLSPPNMPHMPPQMMPGGPMFPPDRFRMPMPFP
PRGPPFHRHPSMGPEGMDDREGRHFRNGRPGFGCPPFHRGRW
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaacgcgttcaacatggagttgttctccatgattgacatgaagcctcca
atatcccgtgctaaaatgatgtctgtgacaaaatcagccatcaaagctataaagctttac
aaacatgttgtccagattgttgaaaagttcatcaagaagtgcaagccagaattaaaggtc
cctggtttgtatgtggtcgactccattgttagacagtcacgtcatcagtttggtgttgac
aaggatgtatttgggcccagattcttgaagaacttcacagatacctttcaaaatctttac
cgttgcccagaggatgataagagcaaaattgtccgtgtcctgaacctgtggcagaagaat
ggtgtgttcgacatggacatcattcagcctctgatggatatggctaatggagccattgta
cctccccctgcactccaagttcctgctgaccctcaaccagagatacagcctgctatcact
agtgcctcagctgtgcctgctgtgccccagctacccagtcctgatgccttagctgctgtg
gcacagctgtttcagtccccccatggtcaggagctgcagagggttctccaaaacttccag
caggcagataagaccctggcagctgccatcgcaaacaacataccaaaccctccccagatg
cctgtggcccagctcaacccctacagtgcacacacagaaaagaaaagctctttagctgag
aaactccttgatcgttttgactatgatgatgaacctgaggatataactcctaaagaactt
aatgcccagtcacaatgcattcctgaaaatgtgtttaaccacttccctggtcagatgccc
aacgcagagaatgttcatccacatatgatgggacagactggtggtatagagcacagtgga
ggaatgagtcatggtgaacatcatatgataccagatggatgccactccataaatgaggct
tattcacattcacggggaaatttaagagaagacccaaatatgaggcgagagggtagacac
agaggctatggcaggagatcaagatccagatctggttccagatctcccaggaggagaaga
tcaagatcttcgtcccgctcaagaaggtcaaggcatcgacgctctcattctcgctccaga
gaacagcgatggagatctcgctcacgctctcaagacaggagtgaaagagagagggacaga
gagcgcagacagaagggtcttcccagcatgaagagccagacactcagtgtttgcaccact
acgctttgggttggacaactagacaagaaaacacagcagtctgacgtgatgtctcttttg
gaagagtttggccagattgagtccatcaatatgattcctccgaggggttgtgcctatatt
gtaatggttcacagacaagatgcctacacagctttgaacaagctcagtagggggtcgtac
aaagttaatcagaaaccagttaagattgcttgggctttgaacaaaggtataaaatcggcg
cacaaaaagttctgggatgtggatcggggagttacctacattccctggagcaaagtcaaa
attgaggagttggagagctatcgggaagggggcatgctggacacagagacactaaatcca
gaatggaataatgccagggacctcaataagcaggcaactgtaaatggagcattggaaagt
gtaccagcagatggaacgatccctgctcacattcaggtgccagcggttcaacaggcagca
cccatcagaagtccacctgctttccctggccccattatgctgtcccctacagccatgcct
ccaggaggagccccgttcatcccccctgagtttgacccttcaaagttggcaccagcaggg
agtctaaaacccccagaggactccaccaaggattctaatagagaaaaaggtacactctca
gatgcaggcagtgacaaccagctgggctctcctgtagcaccagtgatgaccctgccaggc
ccagcagtcatacagggtcccagaccgggtatgcctcctctgcagcctcctcctggcatg
ccaaatcctcatctacctccattcctctcacctccaaacatgccacacatgcctccgcaa
atgatgcccggaggacccatgtttccaccagacaggttcagaatgccaatgcccttccct
cctcgtggtcctcctttccatcgacatccttctatgggaccagagggcatggatgacaga
gaaggtaggcatttccgaaatgggaggccagggttcgggtgcccacctttccacagaggg
agatggtag
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