Seriola dumerili (greater amberjack): 111224544
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Entry
111224544 CDS
T05606
Symbol
lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111224544 (lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sdu04030
]
111224544 (lgr5)
G protein-coupled receptors [BR:
sdu04030
]
Rhodopsin family
Others
R-spondin
111224544 (lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_1
LRR_9
7tm_1
LRRNT
LRR_LRWD1
LRR_R13L1-DRL21
EpCAM_N
Gpr1_Fun34_YaaH
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
111224544
NCBI-ProteinID:
XP_022604805
LinkDB
All DBs
Position
Unknown
AA seq
958 aa
AA seq
DB search
MPGFVALLAAFAALSVGLRSSVAGVEMLGSVAAEESSATGVRGSAVPAEQRASAGVNSTA
VARAGISGDGDRGAGRAGCPGRCRCEVDGLLHRVDCSDLGLREIPSNLSVFTSYLDLSMN
NMTVLSSGALSNLHFLEELRLAGNDLSFIPRGAFAGLYNLKVLMLQNNQLRSVPGEAFNN
LHNLQSLRLDANHISSVPIGCFSGLRSLRHLWLDDNSLTEVPVEALSDLPALQAMTLALN
HISHVPDHAFSKLGRLVVLHLNNNRIVSMGTNCFHGLHSLETLDLNYNSLVEFPTAIRSL
SHLKELGFHSNNIQSIPEHAFTGNPSLITIFFYDNPIQSVGRSAFQNLPELRTLSLNGAA
DLTEFPDLTGTKSLESLTITGARITSLPSSVCEQFPNLQLLDLSYNQIQTLPSFSGCESI
QKIDLHHNEIEELQENTFHGLMSLCCLDLSWNRLSTVRPNSFSALPALTKLDLSSNQLSS
LPLIGLQSLTHLRLAGNDQLMELIPREDLPRVRVMELPYAFQCCAFVSLSWEREEAADFT
GRDTSVLSSQVDQDWEDLLIEFEDEPKPQHSVHCSPAPGPFRPCLHLLGSWLIRGGVWLI
AVLSLVSNSLVVLSIFFSTATSVTLPKLLIGLLALVNGLMGVWCGWLAAVDAWTFGSFWR
YGAKWESSFLCRLSGFLCVFASQTGLFLLTVAALERCLAAATATTGRNKTDKHSHASSLL
FVRLSIVLCFLLGLAVTLPPLVAGHSSTSLCLPLPSSTSSSSLAFSVSLVLLDSLCFLLM
TVAYTRLYCRVNKAPPASEEEAALTRHVAWLLFSDCLLYLPVAFLSFSSLLRLPAAGPEA
AKGVLLLVAPLPACINPLLYLLFNPLAREELAALAKRTCGAMAVPRLHMGGGGGGRGGGG
RSMPVMMDSTYDEDAEKQSCDSTQALVAVGGLKEEEEEERGRIKSETQHSVAIVVPRH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtttgtggctttgttggccgcgtttgcagctctctctgtggggttgaggagc
tccgtggccggggtggagatgctgggctcagtggccgcggaggagagctccgcaaccggg
gtgaggggctccgccgtacccgcggagcagagggcatcagccggtgtgaacagcaccgcg
gtggccagggcggggatctccggggacggggaccgaggagcggggagggctggctgccct
ggccgctgtcggtgcgaggtggacgggctgctgcaccgggtggactgctcggacctgggg
ctccgggagataccgagcaacctgagcgtcttcacatcctaccttgatctgagtatgaat
aatatgactgtgttgtccagtggagctttgtccaacctgcacttcctagaggagctgcgt
ttggcgggaaacgatctgtcattcatccccagaggagcattcgccggcctctacaatctc
aaagtgctgatgcttcagaacaaccagctgaggtcggtccctggtgaggcgttcaacaac
ctgcacaacctgcagtcgctccgcctagatgctaatcacatctccagcgttcccattggc
tgtttctcaggcctgcgttcgctccgtcacctgtggttggacgataactctctgacggag
gtgccggtggaggctctgagcgatctgcccgccctgcaggccatgaccctcgccctcaac
cacatcagccacgttcctgaccacgccttcagcaagctgggccgcctggtggtgctgcat
ctcaacaacaataggatcgtttccatgggaacgaactgcttccacggactccacagtttg
gagacgctggatttgaactacaacagtctggtggagtttcccacggccatccgttcactc
agtcacctcaaagagcttggtttccatagtaacaacatccagtcgatcccggagcacgcc
ttcacgggaaacccgtcactgatcaccatatttttctatgacaatccgatccagtctgtc
ggacgctcggcctttcagaacctgccagagcttcgcacactatctctgaacggagccgca
gatctcactgagtttccagatctgacaggaaccaagagtttggagagcctgactatcaca
ggggctcggatcacctctctgcccagttcagtgtgtgagcagtttccaaacctgcagcta
cttgatctctcctataatcagatccagactcttcccagtttctccggctgtgaaagtatc
cagaagattgacctgcaccacaacgagatcgaggagctgcaggagaacaccttccacggt
ctgatgtctctgtgctgtcttgatttgtcgtggaacaggttgtcgacagtgaggccgaac
tcgttctccgctctgcccgctctcaccaaacttgacctgtcctccaatcagctgtcctct
ctgcctctgattggtctgcagagtttaactcacctgcgattggctggaaacgatcagctg
atggagttaataccccgagaggacctgccccgggtcagggtgatggagctgccttacgcc
ttccagtgttgtgccttcgtctccttgtcctgggagagagaggaggcggcggacttcacc
gggagagacacctccgtcctctccagccaagtagatcaggactgggaggatttactgatt
gagtttgaagacgaaccaaaacctcaacactcggtccactgcagccctgcgccaggaccg
tttcgtccctgcctccatctgctcggcagctggttgatccgtggcggggtgtggctcatc
gcagtgctctcattggtcagcaacagccttgtcgtgctgtcaatcttcttttccaccgcc
acctcggtcacgctgcccaagctgctgattggtctgctggcgctggtgaacggcctgatg
ggggtgtggtgcggctggttggcggcggtggacgcttggacgtttgggagcttctggagg
tacggggcaaagtgggagagcagcttcctgtgtcgactcagcggcttcctgtgcgtgttc
gcgtcgcagaccggcctcttcctgctcaccgtcgcagctctggagcgatgcctggccgcc
gccaccgccaccacaggacgcaacaaaactgacaaacacagtcacgcttcgtctctgctc
ttcgtccgtctgtccattgttctgtgtttcctgttgggtttggccgtcacactgcccccc
ctggtggccggacacagcagcacctccctctgtttgccactgccttcctccacctcctcc
tcctccctggccttctccgtctccctggtgctcctcgactcgctgtgtttcctcctcatg
acggtcgcttacactcgcctctactgccgggtcaacaaagctccacctgcctcagaggag
gaggcggcgctgactcgacacgtagcctggctgctcttctccgactgcctcctctacctc
cctgtggccttcctctccttctcctccctgctgcgcctccccgccgccgggccagaggcg
gcaaagggggtgctgctgctcgtggcgccgctgccggcctgcatcaacccgctgctctac
ctcctcttcaacccactcgccagggaggagctggcagcgctggccaaacgcacctgcggg
gctatggcggtacctagactacacatgggtggaggaggaggaggaagaggaggaggagga
aggtcgatgcctgtaatgatggattcaacgtacgacgaggacgcagagaaacaatcgtgt
gactcgactcaggcgctggtggcagtcggaggcttaaaggaggaggaggaggaggagaga
ggaaggataaagagcgagacacaacattcagtagcaatcgttgttccacgtcactag
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