Seriola dumerili (greater amberjack): 111224756
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Entry
111224756 CDS
T05606
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04510
Focal adhesion
sdu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111224756
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111224756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
111224756
NCBI-ProteinID:
XP_022605102
UniProt:
A0A3B4UUI9
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MSLIIHIITSLALWGPVRALVPEFADVCTEGSCYPATGDLLIGRAHKLTVSSTCGLRHPE
RFCIVGHLEEEKKCFVCDSRRMYDEDNNHVSHTIENVVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKTWQVYRYFAYDCKSSFPGVSSGPL
VKVDDIICDSHYSDIEPSTEGEVILRVLDPAFRIDDPYSVRIQNMLKITNLRVKFIKLHT
LGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGAPTGAEGMVHGRCVCNH
NTEGLNCERCQDFYQDLPWRPAEGRNTHACKKCECNHHSASCHFDLAVYMTTGNMSGGVC
DDCQHNTVGRQCEQCAPFYYQHPNRDLRDPSVCEPCNCDPDGSLQGGLCDSRNDVAAGLI
SGQCRCKANVEGERCDHCRMGHYGLGQGPEGCLPCTCNPLGTLPGGNSCDSGSGRCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRPCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAEHGPGVTVVQRPYPLDRSPTWTGMGFVNVPEGAYLEFNIDN
IPESMDYDILIRYEPQLPEQWEQVNIRVQRPVVNPPNYSGHCRNSIQSGDEQTLSLPPGS
RHVLLVRPVCFEQGLNYTIRLSLPLYSSISNVQSPYTLIDSLVLMPRIRELDMFHGIEGD
GAWDTFQRYRCLESSQSVVKSPMTDICNDYIFSVSALLHKGAMACQCDPQGSLSAVCESS
GGQCRCRPNVVGRNCDHCAPANFLFSPAGCRPCDCDPQGSVSAFCHEATGQCECVPGAAG
RQCSHCLPGFWGFPQCRPCHCNGHSEYCHPQTGECQGCRDFTTGHHCERCLSGYHGDPEL
GSGSHCRPCMCPDGPRSGRQFADSCYLLDYTNQLVCVCSSGYKGARCDQCAPGHFGNPLV
PGGRCLPCQCNNNIDMQDPGSCDVRTGACLKCRHHTDGYGCQHCKLGYYGNAGTQSCRKC
MCHSVGTVPQACSSPDECQCNQRTGQCPCQPNVVGQNCDRCTADTWNIAGGTGCQRCGCD
PVHSFSSSCNEVTGQCSCRPGFGGRTCRECRELFWGDPEVKCHPCDCDPRGISSEQCHRA
TGQCTCVEGVSGPRCDRCARGYQGEFPACEPCHQCFGIWDNVVGELTNQTRRLEAQVTEL
QTIGVTAPYKELIGSLERNSKAVRDIVESNPAAVKLEQIQDLMHQIIGLMSYLNGKLNTT
EETLNVLHDDANSTDVNLDALTKEANQLELSVQELRQQVYDAKNANIQGAMDTITAAHTQ
SMMAELKANASTSDPSNTVEQSATVRKATEDKLSSSQKEFDRKHQRNSQKLDKLSDEMDK
FDLAPLSEKTCGGAAEGDGCSGSPCGGLGCAGADGAPQCGGEGCQGLVTTSQTALKSAKD
LDQEILAAMQEVDKLSRMVWEANVRANEAKGNAMEVLVKSNRSKERVEQSNEQLRNLIKE
IRDLLMNDKADVSVIETVANEVMALEMPTSTEKLKELTKEIRERVGTLTSVETILSQSAD
DIQAAETLLKEAKAASERASNMKETADVVKAALDETERAQNIAMDAIQLAQNNTKGTLDL
LISVESETAMSELKLSNTTSRLVQLEREVGLLRQNNLEVNRLAETADFITDQAKLEAEEA
QQEFDVEVKAKLEEVEDLVGDKGESVLQARRKADELQQEAKELLAQSSSKLQRLGELEIS
YEANQRILEAKAAELAELEQTVRKILEEISHKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttataatccacatcataacaagtttggccctgtggggtcccgtcagggcgctg
gtgccagagtttgcggatgtttgcaccgagggcagctgctaccccgccacaggtgacctg
ctgatcggccgggcgcacaaactcaccgtctcctccacctgcggcctgaggcacccggag
cgcttctgcatagtcggacatcttgaggaggagaagaaatgtttcgtgtgcgactccagg
cggatgtacgacgaggacaacaaccacgtcagccacaccatcgagaacgtggtcaccacc
ttcgcacacaaccgcctgaaaacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaggccgagtttcatttcacacaccttatcatgaccttcaagacg
tttcgtccggctgccatggtgatcgagcggtcgatggacttcgggaagacgtggcaggtt
tatcgttatttcgcctacgactgcaagtcctcgttccccggcgtgtcctccgggcccctg
gtcaaagtggatgacatcatctgcgactcccattactcagacatcgaaccgtccacagag
ggagaggtgattctacgagtgctggacccggccttcaggatcgatgacccctacagtgtg
cggatacagaacatgttgaagatcaccaacctccgggtgaagttcatcaagctccacacg
ctgggcgacaacctgctcgactcccgcgacgaggtgacggagaagtactactacgccctc
tacgatatggtcgtccgcggaaactgcttctgctacggccacgcctccgagtgcgccccg
atggatggagcgccgacgggagccgagggcatggtgcacggccgctgcgtgtgcaaccac
aacactgagggactgaactgcgagcgctgtcaagacttttaccaggatttgccttggaga
cctgcagagggacgaaacacccacgcctgcaagaagtgcgagtgtaaccatcactccgct
tcctgtcacttcgacctggccgtttacatgacgaccggcaacatgagcggaggcgtgtgc
gacgactgtcagcacaacacggtgggccggcagtgcgagcagtgcgcacccttctattac
cagcaccccaacagagacctgagggaccccagcgtctgtgaaccgtgtaactgtgacccg
gacgggtctctgcagggcggactgtgtgattcgcgaaacgatgtggcggctgggctgatc
tcaggccagtgtcggtgcaaagccaacgtggagggcgagcgctgcgaccactgcagaatg
ggacactacgggctgggacaggggcctgagggctgcctgccttgtacctgtaacccgctg
ggaactctgccgggaggaaactcctgtgattcaggctccggaaggtgcttctgcaaacgg
ctcgtcgacggacacaactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggatggctgcagaccatgtgactgtgaccagggcggcgctgttaacaataactgcgac
cctcactcaggacagtgcgtgtgcagggagcacatgtttggacggcgctgcgatcaggtc
gagtccggcttctacttcatcgctctggatcactacacctacgaggccgaggacgccgag
cacggacccggtgtgacggtggtgcagaggccttaccctctggatcgtagccccacgtgg
accgggatgggttttgtaaacgtgccagaaggagcgtacttagagttcaacatcgacaac
atcccagagtccatggactacgacatcctcatccgctatgaaccacagctgccggagcag
tgggagcaggtgaacatcagggtgcagcgtcccgtcgtcaaccctcctaactactcaggt
cactgcagaaactccatccagagcggagacgagcagaccctctctcttccacctggatcc
agacacgtgttgctggtgaggccggtgtgtttcgagcagggactgaactacacgatccgc
ctcagtctgccgctctactcgtcaatcagcaacgtccagagtccgtacacgctcatcgac
tctttggtgctgatgccccggattcgggagctggacatgttccatgggatcgaaggtgat
ggagcgtgggatacattccagcgctaccgatgtctggagagcagccagagcgtcgtcaag
agtcccatgaccgacatctgtaacgactacatcttcagcgtctccgctctgctgcacaaa
ggagccatggcgtgccagtgtgaccctcagggttccctcagcgccgtgtgtgagtccagc
ggaggtcagtgtcggtgtcgacccaacgtggtcggcaggaactgtgaccactgcgccccg
gctaacttcctgttcagccccgccggctgcagaccgtgcgactgtgaccctcagggctcg
gtcagcgccttctgccacgaggccaccggccagtgtgagtgcgtccccggggccgcgggt
cgccagtgttcccactgcctgccgggcttctggggcttccctcagtgccggccctgccat
tgtaacggccacagcgagtactgccaccctcagaccggagagtgtcagggctgcagggac
ttcaccaccggacaccactgtgagagatgtctgagtggttaccacggtgacccagagctg
ggttcaggtagccactgtcgcccatgcatgtgccccgacgggccgcgcagtggacgccag
tttgctgacagctgttacctcctggattacactaaccagctggtgtgtgtgtgcagctcg
ggctacaaaggtgccaggtgcgatcagtgcgccccgggtcacttcgggaaccctctggtg
cccggcgggcgctgcttgccctgccagtgcaacaacaacatcgacatgcaagacccgggg
tcctgcgacgtccgcacgggcgcctgcctcaaatgccggcaccacaccgacggctacggg
tgccagcactgcaaactgggttactacggcaacgctggcacacagagctgcaggaagtgc
atgtgtcactcggtgggcacggtgcctcaggcctgttcctcccccgacgagtgccagtgc
aatcagcgcaccggtcagtgtccctgccagcccaacgtggtcggtcagaactgcgaccgc
tgcaccgccgacacgtggaacatcgccggcgggacgggctgccagcgctgcggctgcgac
cccgtccactccttcagctcctcctgcaacgaggtcacgggacagtgctcgtgcagaccc
gggtttggtggcaggacgtgtcgggagtgcagagagctgttctggggggatcctgaagtg
aaatgtcacccttgtgactgtgatcctcggggaatctccagcgagcagtgccatcgcgcc
acaggtcagtgcacctgtgtggagggtgtttccggcccacggtgcgacaggtgtgccaga
ggctaccagggggagttccccgcctgtgaaccctgccaccagtgcttcggcatctgggac
aacgtggtcggcgagctgaccaatcagactcgacgtctggaggcccaagtgacggagctc
cagaccatcggggtgacggcgccgtataaagagttaatcggcagcttggagagaaactcc
aaggctgttagagacatagtagaaagcaaccctgcagcggtgaagctggagcagatacag
gacctaatgcaccagatcattggtttgatgtcctacctgaacggaaagctgaacacgacg
gaggaaaccttgaacgttctccacgatgacgccaactccaccgacgtaaacttggacgcg
ctgacgaaggaggccaaccagctggagctgagcgtccaggagctgagacagcaggtgtac
gacgccaagaacgccaacatccagggtgccatggacacgatcacagcagcacacacgcag
tctatgatggcggagctcaaggccaacgcctccaccagtgatcccagtaacacagtggag
cagtccgccaccgtacggaaagccacggaggacaaactgagcagcagtcagaaggagttc
gaccgcaagcaccaaagaaactcgcagaagctggacaagctgtccgacgagatggataag
tttgacctggcaccgcttagcgagaagacgtgtggtggtgcagcagaaggtgacggctgc
tccggctccccctgcggtgggttgggttgtgccggcgcagacggagctcctcagtgtgga
ggagaaggatgccaaggcctcgtcaccacctcccaaactgctctcaaatcagccaaggac
ctggaccaggagatcctagcagcgatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaacgtccgtgcaaacgaggccaaggggaacgcgatggaggtgctggtcaaatcc
aaccgcagcaaggagagggtggagcagagcaacgagcagctccgcaacctcatcaaagag
atacgagacctcctcatgaatgacaaggcagatgtgtcagtgatcgagacggtggccaac
gaggtcatggctctggagatgccgacctcgacagagaagctgaaggagctgacgaaggag
atcagggagagggtgggcaccctgaccagcgtggagaccatcctgagtcagagcgctgac
gacatccaggctgccgagacgctgctgaaggaggccaaggctgccagtgagcgggcgtct
aacatgaaggagacagcagacgtagtgaaggcagccctggatgagactgagcgtgctcag
aatatcgccatggacgccatccaactggcccagaacaacactaaaggcaccctggacctg
ctgatctctgtggagtcggagacggccatgtcggagctgaagctcagtaacaccacaagc
cgtctggttcagttggagagggaggtcggcctgctgaggcagaacaacctggaggtgaac
cggctggcggagacggccgacttcatcaccgaccaggccaaactggaagcagaggaggcc
cagcaggagtttgacgtggaggtgaaagctaaattggaggaggtggaggacctggtgggg
gacaaaggggagtcggtgctgcaggcgagaaggaaagcagatgaactgcagcaggaggcc
aaagagctgctcgctcagagcagcagcaagctgcagagactcggagagctggagatctcc
tacgaggcgaaccagcgcatcctggaggccaaagctgcagagctggccgagttggagcaa
accgtccgcaagatcctggaggagatcagccacaaagtgactctgtacagcacctgtctg
tga
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