Seriola dumerili (greater amberjack): 111224763
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Entry
111224763 CDS
T05606
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111224763 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111224763 (apex1)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111224763 (apex1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111224763 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
111224763
NCBI-ProteinID:
XP_022605111
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKRGKKAEEASADGENDAGSAAAKKTKKAKEPEAPVLYEDPPDKMTSKDGRDANMKITSW
NVDGLRAWVKKKGLDWVREEDPDVLCLQETKCADKDLPGDITSMPEYPHKYWAASDDKGG
YSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPNFYLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLTELDIQKPLVLCGDLNVAHQEIDLKNPKGNKKSAGFTPEEREGFSQLLSAG
FSDSFRELYPEQTNAYTFWTYMMNSRAKNVGWRLDYFLLSSSLLPGLCDSKIRNKAMGSD
HCPITLHFAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggcagaggaggcgtctgcagatggggaaaatgacgccggctct
gctgctgcaaagaaaacgaagaaggctaaggaaccagaggccccagtgctgtatgaggat
cctcctgacaaaatgaccagcaaagatggacgagatgccaacatgaagatcacctcctgg
aatgtggacgggctgagggcctgggtgaagaagaagggcctggattgggtgcgcgaggag
gatccagatgttttgtgcctgcaggagaccaagtgtgcggacaaggacctccctggtgat
atcacctccatgcccgagtaccctcacaagtactgggctgcctcagatgataaggggggt
tacagtggtgtggccatgctctgcaagactgaacccctcaaagtgacctatggcattggc
aaagaggagcatgacaaggagggccgtgtcatcactgcagagttccccaacttctacctg
gtcaccgcctatgtgccaaacgccagcagaggcctcgtgcgcctagattatcgcaaaacc
tgggacgtggacttccgggcgtatctgaccgagctggacatacagaagcccctggtgctg
tgtggcgacctcaacgttgcacaccaggagatcgacctgaagaaccccaagggcaacaag
aaaagcgccggcttcacccccgaggagcgcgagggcttcagccagctgctgtcggccggt
ttcagcgacagcttccgcgagctctaccccgagcagaccaacgcctacaccttctggacc
tacatgatgaactcccgcgccaagaacgtgggctggaggctcgattactttttgctgtcg
tcctccttgctgccaggcctgtgcgacagcaagatccgcaacaaggcgatgggaagcgac
cactgccccatcactctgcacttcgctgtgtag
DBGET
integrated database retrieval system
