Seriola dumerili (greater amberjack): 111224821
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Entry
111224821 CDS
T05606
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111224821 (pus7l)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
111224821 (pus7l)
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111224821 (pus7l)
Prokaryotic type
111224821 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
111224821
NCBI-ProteinID:
XP_022605205
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MKQDSDAVNVPACFISSHEGFLGSIKNFIKDFVVTEIDVNGQQVNKATATQSPGGASSYK
NNETAAEFRHNNQSSVSHDTDVPADYEVDVAPPSPGSFDLGVILGQSVSDELEQFVLTLK
DEKPTQQELSLGSFTDKHHRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELSQLVTE
DEAEDFFRFIDAKVRGSSYTFGPDDNKEHRTAVHHFLSRRFGKLVETKSFSDQGSTAISV
RLRERGRPKKRSADERKEEEVYTAFTLCKENLETLEAISYMAAALGVLPSDFTYAGIKDK
RAITYQSMVVKKVSPQRLKEKTGEFERRGMRLSQVRSVSEPLRLGRLQGNHFDLVVRDLR
PHGASDTHSSGADRHARLAALVKEAVENVKARGFVNYYGPQRFGSGQSVQSDRVGLALLK
EDMVSAVRLFFTPDEGNDPQSHAKRHFLQTDNAKESLALMPLSKARERLMLRALNRYGTG
ADGCAQAWLSLPHSMRVFYPHAYCSRVWNEAAAHRLATLGHSVRRGDLVWMQEGHNKPED
TGETSSAQVRKIHVVTDQEEQGGVYKLGQVLLPMPGNTVKYPENAMGTWYQERLARDGLE
DCRFRVGSLKLNLPGCYRPLLALPRNLSYQLQRAACRDGGGGEVTGERKQDSLALTLNFD
LDSSCYATICLREIMKCDP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacagtgatgctgtgaacgtccctgcatgcttcatatcaagccatgaaggt
tttctcggaagcatcaaaaactttatcaaagactttgtggtgactgagatagatgtcaat
ggacagcaggttaataaagctacagcaacacagagcccaggtggcgcctcctcatataaa
aacaatgagaccgctgcagaatttaggcataataatcagtcctctgtctcacacgacaca
gatgtcccagctgattatgaggtagatgttgccccacctagtccaggcagctttgattta
ggtgtgattttaggccagtcagtcagcgatgagcttgagcagtttgtgttgactctcaaa
gacgaaaagccaacccagcaggagttatccctgggatccttcactgacaaacaccacaga
gccaacgtccaccgggccgtcagacaccgcttccccttcctcatgaccgtcaccattcag
cccgagatcagggtgagggaggaccccgactacagagagctctcccagctggtcacagag
gacgaagcagaggacttcttcaggttcatagatgccaaagtgcggggctcatcctacacg
tttggacctgacgacaataaggagcacaggacggcggtccatcacttcctgagccgcagg
tttgggaaactggtggagacgaaaagcttcagcgatcaggggagcacagcaatctcagtg
aggctgagagagcgagggaggccgaagaagagaagcgcagatgagcggaaggaagaagaa
gtgtacactgcgttcaccctgtgtaaggagaacctggagactctggaggccatcagctac
atggccgcagctctcggtgtcctaccgtcagatttcacctacgctgggatcaaagataag
agagccatcacctatcagtccatggtggtgaagaaggtctcacctcaacggttgaaagag
aagacgggcgagttcgagaggagagggatgcgtctgtctcaggtccgctctgtcagcgag
cctctcaggcttggacgactgcaggggaaccactttgacctggtggtccgcgacctgaga
ccacacggagccagtgacacacactcctctggtgcagacagacacgctcgcctggcagcg
ctggtaaaggaagcagtggagaatgtcaaggccagaggttttgtcaactactatggacca
cagaggtttggcagtggacagagcgttcagtctgacagagtgggactggctttactcaaa
gaagacatggtcagtgctgtgcgcctcttcttcactccagacgaaggcaatgatcctcag
agccacgcaaagaggcacttcctccagacagataatgctaaggagtctctggctttgatg
ccattgtctaaggccagggagcggctgatgctgcgggccctgaaccgctacggtacaggt
gcagatggatgtgcccaagcctggctcagcctgccccacagcatgagagtcttctaccca
cacgcctactgtagcagagtgtggaacgaggcggcggctcacaggttggctactctgggc
cacagtgtcaggcgaggagacctagtctggatgcaagaagggcacaacaaaccagaagac
actggagaaaccagctctgctcaggtgagaaagatccatgtggtgacagaccaagaggag
caagggggagtctacaaactaggacaagtgttactgccgatgccaggaaacacggtgaag
tatccagaaaatgccatggggacctggtaccaggagagactggccagagatggactggag
gactgtcgcttcagagtcggcagcctgaaactgaatctgcctggctgctaccgccccctg
ctggcccttccacgcaacctcagctaccagctccagagagcagcctgcagggatggagga
ggaggagaggtgacaggagaaaggaagcaggactcgctcgctctcaccttgaacttcgac
ctggattcttcctgctacgctaccatctgcctcagagagatcatgaagtgtgacccgtag
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