Seriola dumerili (greater amberjack): 111224844
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Entry
111224844 CDS
T05606
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111224844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111224844
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111224844
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111224844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
111224844
NCBI-ProteinID:
XP_022605244
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MFGANRKKFMEGGVESDYADDSSLYYSQQSMFPPHRPDKDMLVSSSASSTGQLSQLGASL
YGPQSALGFPMRGMNSSAAPQLSRSGLNQSASQLSSHASTPNAGTMHTPPSPSRGILPMS
SRSVLNHSQQVGGPTGQAGGMGVGGERGGSGGGGGRSGSMGSPSRSSPSIIGMPKQQQAR
QPFTINSMSGFGVNRNPGFSLNNSLSNNIFNGTDGSENVTGLDLSDFPALADRSRRDGGS
NPTPLLNPLAGRAPYVGMVTKPSSEQSQDFSIHNEDFPALPGPNYQTKDPTSTSEDSKTN
LNSSGKPTSNSDGPKFPGDKSSAPSNNNQQKKGIQVLPDGRVTNIPVGMVTDQFGMIGLL
TFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEY
LTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITR
APGMEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPSTFNYNPAQQAF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctaaccggaagaagtttatggaggggggggtggagagcgactacgcggac
gactccagcctctactacagccaacagtccatgttccctcctcaccgccctgacaaagat
atgctggtgtcttcctctgcttcctcaacgggtcaactgtcacagctgggagccagttta
tatggcccgcagagtgctctggggtttcccatgcgaggtatgaacagcagcgcagcacct
cagttaagtcgaagtgggctcaaccagtctgccagccagctctccagtcatgccagtaca
cccaacgctggcacaatgcacacacctccctcaccgagcaggggtatcctgcccatgagc
agccggagcgtgctgaaccacagccagcaggtggggggtccgacgggtcaggcgggaggg
atgggggtaggaggagagaggggaggcagcggtggaggaggaggcaggagcggcagcatg
gggagtcccagccgctcgtcacccagcatcattggcatgcccaaacaacagcaagcacgg
cagcccttcactattaacagtatgtcagggtttggggtgaatagaaatcccggcttcagc
ttgaacaactcgttatccaacaacatcttcaatggcacagacggcagtgagaatgtgacg
gggctggacctgtcggatttcccagcgttagcagacaggagtcggagggacggaggctcg
aatcccaccccactgctcaacccgctggccggtcgggctccttacgttggcatggtaacc
aagccgtccagtgagcagtcgcaagacttctccatccacaacgaagacttcccagctctt
cctgggccaaactaccaaacaaaagaccccaccagcaccagcgaagacagcaaaacgaat
ctgaattcatcaggaaagcccacctctaactcagatggtccaaagttccctggcgacaaa
agctctgcgcctagcaacaacaaccagcagaagaaagggatccaggttcttcccgacggg
cgcgtgaccaacatcccggttggcatggtaacagaccagtttgggatgatcggcttgcta
acgttcatccgggcggcagaaacggatcctggcatggtccacctggcgctgggctccgac
ctcaccacacttggcctcaacctcaactcacctgagaatctctatcctaagtttgcgtct
ccctgggcgtcggctccgtgtcgaccgcaggatatagattttcacgtcccctcagagtat
ttaaccaacatccacataagggacaagttagcagctatcaagttgtctcggtatggtgaa
gatctgttgttttatctctactatatgaacggaggagacctactacaactactggctgca
gtagaactctttaacagggactggaggtaccataaagaggagcgggtttggatcacccgg
gctccaggtatggagcccacgctgaagaccaacgcctacgagagagggacctactacttc
ttcgactgcctcaactggagaaaagtggccaaggagtttcatctggagtacgacaaacta
gaagagcggcctcacgttccctccacgttcaactacaatcctgcccagcaggccttctga
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