Seriola dumerili (greater amberjack): 111224976
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Entry
111224976 CDS
T05606
Name
(RefSeq) uncharacterized protein LOC111224976
KO
K08127
epiphycan
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sdu00535
]
111224976
Proteoglycans [BR:
sdu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
111224976
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
111224976
NCBI-ProteinID:
XP_022605414
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MLMRLVLGLFVLKAVVASPRFSRQVDLDSYDSANYDVDLDNLNLENQDIYDYEDGLTIDD
PQIEIGTLAPPDYNYPVPEASLEEQEGEEEEEEVPLTPQLIPQGSGGSGVLMGPDTQKEV
ELRLTPIDILHVSGDFGGSVGSGASGASGASGSGGSGDLLVSGGSGGSGDIVLVSGASEE
LLSSGGSGEFLVSGDILISGDLWGSGDLSGSGDIMGSATSGASGDLGSGGSGISIELPLG
SGESGDQSGSGFSGDLLISGASGSSGVSGDSGESGDSGITLISGEEELPLIPDTIPQEAS
GASGDFSGASGISGASGDIEASGDVDVSGASGSGVSGDTEVPEVTLVPDIDKEEGLLPTT
PETPQEGTGGVEGSVSSGLPEPGEPDEPDEPVVDRRGMPTCLLCTCLGGSVYCDDLKLDS
VPPLPKDTTHFYARYNRITKINKSDFASMNKLKRIDLTANEITTIEDRAFMGLPELEELV
IRENHISQLPALPETMTLIDASHNNIGTKGIHKEPFKDMTGLLYLYLTDNLIDYIPVPLP
DSLRSLHLQRNNIQMMHEDTFCNLKDFNYIRNALEDIRLDGNPINLSRTPQAYICLPRIP
IGDLI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgcggctcgtgttgggactcttcgtcctcaaagcagtggtggccagccccaga
ttttcccgacaagtggacttggactcatatgacagtgccaactatgatgtggatctagac
aatttgaatttggagaaccaggatatctatgactacgaagatgggctgacaattgatgat
cctcagatagagattggaacactggccccacctgactacaactaccctgtacccgaggcc
tccttggaggaacaggaaggagaggaagaggaggaggaggtgcctctgacaccccagctc
atcccccagggttcagggggatctggggttctcatgggcccagacacacagaaagaggtg
gagctgcgtctgacgcccattgacatccttcatgtctccggggattttgggggttccgta
gggtctggggcctcaggagcttctggggcctctgggtctggaggctcaggagatctactg
gtctctggcggctctgggggttctggtgacattgtactagtctccggagcctctgaggag
ctcctcagctctgggggatctggagagttcttggtatctggggatatcttgatatctggg
gatctctggggatctggggatctctcaggatctggggatatcatgggatctgcaacttct
ggagcctctggggaccttggctctggaggttccgggatttccattgaactccccctgggc
tctggagaatctggggaccagtctggttctgggttctctggagatctcttgatctcaggg
gcctccggaagctctggggtttctggggactctggtgagtccggggactctgggataact
ttgatatctggagaggaggagctgcccctcattcccgacactatcccccaagaggcatcg
ggtgcttctggggatttctcaggagcttcaggaatctcaggggcctcaggggatattgaa
gcctctggagacgtagatgtctctggagcctctgggtctggtgtctctggagacaccgag
gtccctgaggtaactctggtccctgacattgacaaagaggaggggctgcttccgactaca
ccagaaacccctcaggagggtactggcggtgtagaagggtcagtgagctctggattgcca
gagccgggtgaacctgacgagcctgatgagcctgtggttgacagacgaggtatgcccact
tgcttgctgtgcacgtgccttggtggttcagtctactgtgatgacttgaagctggacagt
gtaccacctctccccaaagacaccactcacttctatgcacgctacaacagaatcaccaag
atcaacaagtctgacttcgcctccatgaacaagctgaagaggatcgacttaaccgccaat
gagataacaaccatcgaggacagagcatttatgggtctccctgagctggaggagctggtg
atccgagaaaatcacatctcacagctgcctgccctcccagagaccatgaccctgattgat
gccagccacaacaacattggcaccaagggtattcacaaagagccgttcaaagacatgact
ggcctgctgtacctgtacctaacagacaacctcattgattacatccctgtgcctctaccg
gacagcctgcgatctctacacctacagcgtaacaatattcaaatgatgcacgaggacacg
ttctgcaacctgaaagatttcaactacatcaggaacgcactggaggacatccgtctggac
ggcaaccccatcaacctcagcaggaccccgcaggcttacatctgcctgccccgtataccc
atcggggatctcatttaa
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