Seriola dumerili (greater amberjack): 111224978
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Entry
111224978 CDS
T05606
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04514
Cell adhesion molecule (CAM) interaction
sdu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111224978 (cntn1)
04517 IgSF CAM signaling
111224978 (cntn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111224978 (cntn1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
111224978 (cntn1)
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
Contactins
111224978 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sdu00537
]
Others
111224978 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_4
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
111224978
NCBI-ProteinID:
XP_022605416
UniProt:
A0A3B4TUZ5
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MASTALLLLALASSVSLTVAVLFGEPRIFGEDATGYGPIFEEEPVDVVYTEGSPDERISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPRQKKHAGTYVCVAKNIY
GTVISKEARVKFGFVEEFSDEERDPVYVKEGQGAVLLCAPPKAWPEAVTYRWIYNEFPVF
LHTDRRRFVSQRTGNLYISKVEAQDAGNYSCYVSSPIIGKSVFSKFIPLIPLPPDEGEEK
KYPADIRVKFPDTTAMLASNITLECFALGNPIPHIVWRKVDATDLPANHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQIDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELRFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEF
NPVKKQLLGAKDGRVVIECKPRAAPRPRYTWKKGKELLFNNSRISILFDGSLQILNATKN
DEGTYTCFAENDRGKANSSGDLTITEATSITVAPEDSEVKVGDEVILSCTASFDPMLDIT
FIWAIDFRVIDFDSEWQHYERVISEDGSGDLRIKNAQIWQEGRYTCTAQTVVDSDTAYAD
LKVVGVPGPPGVLRVEEIGDTWVKLLWSKAAEHNSPIMYYTIQTRHYWALYEDDWRDAST
SPTVIDGSMEKAEVTDLYPWMEYQFRVIATNEYGSGEASIPSLKIKTWDAAPVVAPTDVA
GYGGRNGEIVITWTPVQPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHREPYF
IPTEEDFQVREFQVKVKTFNVKGDGPYSLTKVIYYPRDVPTESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGANRIFVPGTVNQTRLENMLPDSHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPDPPRMWRYISWTGKWLYVWWDHIQYDWFGNVSFPL
YYKVMFRKTGYIYGKVYITGWHFMDFPMPQVGDYELMVRGRYEGGDGPVRKISIKGKASM
ISPTLSLVSLVLLALCIVGLEI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgctttactgctcctggcccttgcctcgtccgtctccctcacagtggcg
gtcctgtttggtgagcctagaatttttggagaggatgcaactggttacggtcccatcttt
gaggaggagcctgtggatgtggtatacactgagggctcacccgatgagagaatctccatg
aactgcagggcacgggcaaacccaccagcttcatacaggtggcgccgtgataactgggag
atcaagctgatggagcagccagacgagcactacagcctcgtgggggggaacctggttatc
accaaccccaggcagaagaagcacgccgggacgtacgtctgcgtggccaagaatatctat
ggcaccgtcatcagcaaggaggccagggtcaagtttggatttgtggaggagttttctgac
gaggagagagatccagtgtatgttaaggaaggacagggagcagttctgctgtgtgcgcct
ccaaaagcctggccagaggcggtgacgtaccgctggatctacaatgagttcccagttttc
ctgcacacagatcgccgcagatttgtctcccaaaggacagggaacctgtacatctccaag
gtggaagctcaggatgcaggaaactactcctgttacgtctccagtcccatcatagggaag
agcgtcttctccaagttcatccccctcatccctttaccccctgacgagggtgaggagaag
aagtacccagcagacatcagggtcaagttcccagacactactgccatgctggcctctaat
attacattagagtgctttgctctgggaaatcccatccctcatattgtttggaggaaggtg
gatgccacagacctcccagctaatcacgagatcagcgaatcaggagccgtgcttcatttg
tacaatgtacagtatgaagatgtgggaggatatgagtgtgaagccatcaacactaaaggg
aaggactggcacaaggcctggctctatgtagagtctgccccggagtgggctgaaactatc
aacaacactcagatcgacattggctcagagcacaccatgcgatgtgtggcgtcagggaag
cccttccctttcatccgctggtacaaagacggatatatgtatggcaaaggtgagctgaga
ttttccagtctgacttttgatgactccgggatgtaccagtgtattgctgagaattactgg
ggcatcaaatacgccaacgctgagctgcgagtcattgcctgcgctcctacatttgagttt
aaccccgtgaagaagcagcttcttggagctaaagacggacgtgtggtgattgagtgtaaa
ccccgagctgctcctagacctcgatacacctggaaaaagggcaaagagctgctcttcaac
aattcacgcatttccatactgtttgatgggagtctgcagatcctcaatgctacgaaaaat
gatgagggcacttacacctgctttgccgagaatgacagaggaaaggccaacagctctggt
gatctcaccattacagaggcgaccagcatcaccgtggctcctgaagacagtgaggttaaa
gttggtgatgaggttattctgagttgcactgcgtcattcgaccccatgctggacatcacc
ttcatctgggccatagacttcagagtcattgactttgactctgagtggcaacactacgaa
cgtgttataagtgaagatggcagtggtgaccttagaataaagaacgcccagatttggcag
gagggtcgttacacctgcacggctcagaccgtggtggacagtgatacagcgtatgctgac
ctcaaggttgtaggtgttcccgggcctcctggtgtgctccgggtggaagagatcggggac
acatgggtgaagctattgtggagtaaagcagcggagcataacagccccattatgtactac
accattcagacgaggcactactgggctctgtatgaagatgactggagggatgccagcacc
tctccaaccgttattgacggcagtatggagaaggcagaggtgacagacctgtacccctgg
atggagtatcagttcagggtcatcgccaccaatgagtatggttctggagaggccagtatc
ccctccctcaagatcaaaacctgggatgctgctccagtcgtagcgcccactgatgtggca
ggttatggaggcagaaatggcgaaattgtcatcacatggacacctgtgcagccgtggtat
ttctacggcaagaagtttggttacatcgttgcattcaagcctcacgatgcttatgactgg
tggtacgagaccatctcagaccccgagacgaggcgttatgttcacagggaaccctacttc
attcccactgaggaagatttccaggtgcgagagtttcaggtgaaggtcaaaacatttaat
gtgaaaggagacggaccatacagcctcaccaaggtcatctactacccacgagatgtacct
acagagtctccgacagacgtctatgccagaccggtgtcctccactgaagctctggtgtgg
tggttgccagtagtcgacactgggacaggcctgcagcagtacattgagggttaccaggtc
aaatactggagaaagtacgatgacccggagccaggagccaaccgtatattcgttccaggc
acagtcaatcagaccaggctggagaacatgctgccagactcacactacctcatcgaggtc
cgtgccttcaatggagccggcctcgggccccccggtgaacactgtgagatgttcacaaag
agaccaccaccaccagatcctccaaggatgtggcgctacatcagctggacaggaaagtgg
ctgtatgtgtggtgggatcatatccagtacgactggtttggcaatgtttcattcccactg
tactataaggtcatgttcagaaagacaggttacatctacgggaaagtctacatcactggc
tggcacttcatggacttccccatgcctcaggttggcgactatgagctgatggtacgcggc
cgttatgaaggaggagatggaccagtcaggaagattagtattaagggtaaagcatctatg
atctcgcccactctaagcctggtatctttggtgctgctggcgctgtgcattgtgggattg
gaaatttaa
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integrated database retrieval system
