Seriola dumerili (greater amberjack): 111225008
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Entry
111225008 CDS
T05606
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111225008 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111225008 (arid2)
03021 Transcription machinery [BR:
sdu03021
]
111225008 (arid2)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111225008 (arid2)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Helix-turn-helix
ARID
111225008 (arid2)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111225008 (arid2)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111225008 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
FOXP-CC
Pox_D5
Motif
Other DBs
NCBI-GeneID:
111225008
NCBI-ProteinID:
XP_022605466
UniProt:
A0A3B4UTQ7
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSAFKKIPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWIELGEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEEAQPGNPKA
SLPIGAIPNSYNYQQHIVSDYLRQSYGLSTDFVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGTDWKEKTSRDFVRFWKEV
VEDAEVRELIWDKGSPAQDGTSCEERWQSLFHPPRNLGISDMEAQRVLQIAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQDSYREVMMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIASVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANADQAAE
VRPQLVEQVPAAVQGAPAAVTRVPVQSTQPPPGIVELDGEKFTLQWLNAHFETNPEGSVS
RSEMYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQEEPKANGQVQILLVGLRR
RSIPLPIQLYYQQSQQQQQQSPAAAPPPPAARHEAPGDPQAPPPGLPPGHPILGPQFVRA
PGPSLSTGGAAPSMALTAQEPPHANHPTVSRHPVPPQVPLQLPPNPLAAVQQQVRPGPVV
QIPTSAPATQNHSPQNPTALPAAQQQQQHSPMLPTGTPVTLFQQVPQGHILTARVQGVCP
PITHHPPLPQIPPLSGPQGGAPQVEPQCVAAASAPSSSIQVGGSQALSITGVPNSQGSRV
AFQNIAPKPAPNQSGGPAATIATPNQQPQPQQQAQSVVIVSPNPQQSPAYTPAIHQIVLA
NPSAIPGAQTIQIAGQPGAASSPCPPPVSHSNTQVQPNQTVSHALSMKRHQQQQHQQQHQ
PQPPLQIISQTPPSQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNSTIAPSPQ
VIYQAGYSTQTPSTQPQQLNVQLVPGQLPAAGAPALQTVQLLPGQLISTSSPGAATIIQG
PTAAGQVTFTVVPNTGFTTSTAAVAAVSQGAVAPVVPPPPFSTGTVPHHTPAAPPPPPPP
LPAPLRGDKIICQKEEEAKDATGLHIHERKIEVMENSSLAEGDSSNGKASNGDVAAGAKL
LNGRKCMESNLPPYHSGNSQGALNGPATESHPANGKQALSPGLNTPLEGNPDPKKTLVNG
VCDFDRGDSGGNFNKNIPNHIASKQYLGNGEVGPSEKSHGSDPPLPSPPPPQQDTAKAQQ
AERLANGPQAVGNRLPSELTNGPLGLGHAVLRQQLLPNSSLPPTVTVTSQSLAASPANGV
ASEARGLKRPAENEDRSAAAASSGIPNKVGVRIITISDPNNAGSSATMVAVPAGTDPSTV
AKVAIENATQQRNCSPTEAAGSTPTVTPSPPPVSQPAPAGHHNPHLPAQQTSAAPPEQSR
KAGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKDVYGGQCQWEGCEPFPRQRLSFITHL
QDKHCSREALLAGLKLEEQQAQSPNQTSSQTPPVSGSTPAPRAPKAIVNHPSAALMALRR
GSRNLVFRDFTDEKEGPVTKHIRLTAALTLKNIAKHSDCGRMLVKRHETHLSVLALSNME
VSTTLAKCLYELTRSLQA
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaattccaccaaagcagaggatcggcgttcaagaagattcctatcgtg
ggtgggaaagagctggatctgaatgctctctatatcagagtcgtctctttaggtggattt
gcaaaggtctctgacaaaaaccaatggattgaactcggagaagagtttaactttcccagg
agttgttccaacgctgcatttgctttaaaacagtactaccttcgatacttggagaagtat
gagaaagtccaccacttcggcgaggatgatgaagaagcgcagccggggaatcccaaagcc
tctcttccaatcggtgcaattcccaactcttataactaccagcaacacattgtatcagac
tatctccgccaaagctatggactgtctacggatttcgttccaccgtgtgactacaataaa
ctggtgctgtctctcctctcgggcctacccaacgaagtggacttcgctgttaacgtttgc
actctgctttccaacgagagcaagcacgccatgcagctggacaaggaccccaaactggtc
acgttgctgctggcccacgccggcgtcttcgacgactcgctaggcagcttctccggggta
ttcgggacagactggaaggagaaaacgtcccgggactttgtcaggttctggaaagaggtg
gtggaggacgctgaagtcagggagctgatctgggacaagggcagcccagcacaagatggt
acgtcgtgtgaggagcgctggcagagcctcttccacccgccacggaacctcggtatcagt
gacatggaggcccagcgggtgctgcagattgccgttatcctgcgaaacctctccttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttttgctctgt
gcccactgtaacctcatctcactccgacagctcggactggacacgttgggcaacgtggct
gccgagctccagctggatcccgttgactttcggacgactcatctgatctttcacaccatc
accaaatgcttgatgtccagggaccggtttctcaaaatgagagccatggagatcctgggc
aacctcagtaaggcggaggacaatggtgtgctaatctgtgagtacgtggaccaggactcg
tacagggaggtaatgatgctcctcaccctgcccgacctcatgctcctcatggcctccttg
gaggtgctgtacctgctggcccagctcggagagattccctgcagcaagatcgcctccgta
gaccacagcatagaccttttagtgcgattagtatcggttgaccttcacacatttggacct
gacgccctaacagcggtgcggttgattgagcatcaggccaacgctgaccaggcagccgag
gttcgaccacagctggtcgagcaggtacctgcagccgtgcagggagcaccagcagctgta
acaagggtcccagttcaatccactcaaccaccacctggtattgttgaactagatggggag
aaatttacactgcagtggctaaacgcacactttgagacaaaccctgagggctctgtgtct
cgatcagagatgtactctgagtaccttgccacgtgcagtaaaatgggacgaagcaacatc
ttgaactccaccgggttccttaaatgtctccggactgtgttccccaaccacacgatgcgg
cggcaagaggagcccaaggccaacggccaggttcagatccttctggttgggctaaggcga
aggtcaatccccttgcccatccagctgtactaccagcagtctcagcagcaacagcagcaa
agtccggcagcagctcctccacctccagcagcccgacatgaagcacctggagaccctcag
gctccgcctccaggcttacctcccgggcatcccattcttggaccccagtttgtccgggcc
ccaggccccagcctcagcaccggaggtgccgccccatccatggccttgactgcacaggaa
cctccccatgcaaaccacccgactgtttctcgtcacccggtgcccccacaggtgcctctg
cagttaccaccaaatcctctggcagctgtgcagcaacaggtccgacctggtccagtggtc
cagattccgacgtcggcaccagccacccagaaccacagcccccagaaccccaccgctctg
cctgcggctcagcaacaacagcaacactcccccatgctccccacggggacgccagtcacg
ctatttcagcaggtaccacagggccacatcctcaccgccagggtacaaggtgtgtgccct
ccgatcacccaccatcctcccttgcctcaaatccctcccctgtctgggcctcagggtgga
gctccccaggtggagcctcaatgtgttgctgcagcatcggcaccctcctcttccatccag
gtgggaggtagtcaggcgctaagcatcacgggtgtgcccaattcccaggggtcacgtgtc
gcatttcagaatatcgcccccaaaccagcgccaaaccagtcaggtggaccagcagccaca
atagccactcccaaccagcagcctcagcctcagcagcaggcgcagagtgtagtaatagtc
agccccaacccccagcagagccccgcctacacccctgccatacaccagattgttcttgcc
aacccctccgctattcccggtgcccaaactatccagatagcagggcagccaggagctgct
tccagtccctgcccgcctcctgtctctcactccaacacccaggtccagcccaatcaaact
gtcagccacgcactgtccatgaaacggcatcaacagcagcaacatcaacagcagcatcaa
ccacagccaccgctccaaattatctcccagactcctccctctcagcctacctccactgag
tccagcttgatcaaacagctactgcttccaaagcgagggccttctacgccgggaggaaag
ctcatcctacccgctccgcaggtgccccctcccaacagcacgatagcccctagtccacag
gtcatctaccaggcgggctacagcacacagactccctctactcagcctcagcagctcaat
gtccagcttgttcctggccagcttcctgcagcaggagctccagcccttcagacggtccag
ctcttgccaggtcaactcatttccacaagtagtccgggggcagctaccatcatccagggc
cccacggcagctggacaagtcacattcaccgtggtccccaacactggcttcaccacctct
actgctgctgttgctgctgtcagccagggcgccgtggctccggtcgttccccctcctcca
ttctctactggaaccgtgccccaccacaccccagcagccccaccaccaccaccgccacca
ctgccagctcccctcagaggagacaagatcatttgtcaaaaggaggaggaggctaaggat
gccacggggctgcacatccacgagaggaagattgaggtgatggagaactcgtctttggca
gaaggagactcctctaacggcaaagccagtaacggcgatgtcgcggcaggtgcgaagctg
cttaatggtcggaagtgcatggagtctaatctacctccataccactcagggaacagccag
ggggcactcaatggcccggctacggagagtcaccctgctaatgggaagcaggccctctcc
cccggcctgaacacccctctggagggcaaccccgaccctaaaaagactttagtcaacgga
gtgtgtgactttgatcggggtgacagtggtggcaactttaacaaaaacattccaaatcac
attgcttccaaacagtacttggggaacggggaagttggcccttctgaaaagagtcacggc
tcagacccccctctccctagtcctccccccccacagcaggacactgccaaagcccagcag
gctgagcgcctggccaacggaccccaggcagtaggcaataggcttccctcggaattaaca
aatggacctttggggctgggccacgctgtgctaagacagcaactgctccccaactcctcc
ctcccccccactgttactgttacctcccagagtcttgctgcctctcctgcaaacggagtg
gcctccgaggctcgaggcctcaagaggccggctgagaacgaggaccgcagcgcagcggca
gcatcctcggggatccccaataaagtgggagtgcggatcatcaccatcagtgaccccaac
aacgccggcagcagtgccaccatggtggcagtgccagcaggaacagacccaagcacagta
gccaaagtagcaatagagaacgccactcagcagaggaactgctcacccacagaggcagct
ggctcaacgccgaccgtaaccccgtccccgccccctgtatcccagcctgcaccagcggga
caccacaaccctcacctcccagcacagcaaacctccgcagcgccgccagagcaaagcagg
aaagcagggcagaacttcaagtgtctgtggcagtcctgtaaacggtggtttgaaacgccg
tctcaggtgttttaccacgcagcaacgcagcatggtggaaaggatgtgtacggaggccag
tgtcagtgggagggatgtgaaccttttccacggcagagactgtccttcatcacacatcta
caggataagcactgttctcgagaggctttgctggctggactcaaattagaggagcagcaa
gcacaaagtcccaatcagacttcttcccagactccgccagtgtctggcagtactccggca
ccgcgagcaccgaaagcaatcgtcaatcatccgagcgcagctctcatggccctacgaaga
ggctctcgaaacctggtcttcagggacttcactgatgagaaagagggaccagtgaccaaa
cacatacgactaactgctgccttaacgttaaagaacatcgccaagcactctgactgtggt
cgcatgttggtaaagaggcatgagacgcacctctctgtgctcgcgctaagtaacatggag
gtttccaccacgctcgccaaatgcctttatgaactgacgcgctcgctccaggcttaa
DBGET
integrated database retrieval system
