Seriola dumerili (greater amberjack): 111225114
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Entry
111225114 CDS
T05606
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111225114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111225114
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111225114
REST complex
111225114
Heterochromatin formation proteins
Other heterochromatin formation proteins
111225114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
111225114
NCBI-ProteinID:
XP_022605561
UniProt:
A0A3B4TIX9
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQSRRPPVQGIAESFQHRALAPAPTVIEAAADNMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHSNTAPHVGPHAHGLTVQSQGPAVVQGHVHPPTPITSTQGQQQ
FQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPD
LIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPVSGASSQPASHHQHQ
SLPQPGPHTTTTTTTTTTPPIPAQPAPNKTSKPIQSPAHTPTSQPNPSIPSYASPRSPSV
QSHTPVSSTPSAGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQR
NAKEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTAPDRAESV
RNDHGGTVKRPLLNNKQRLSQNGLPIRRPAGVGPTPPVKKKPKIMGKDHGMTEASKHSTS
TETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNF
LGYREFSHGESSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPL
CREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETV
QRRLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKRNPAVSVPIVL
KRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIELL
YDDRQERASEETATPPPSGPHMTLTYDDSQILEDAAALIIHHVKRQVGIQKEDKYKIKQI
IHHFIPDLLFARRGELSDVEEEEEEEEEDVEMDQDGPKKHNGLPGSSPTKSKLLFSNTAA
QKLRGTDDAYNLFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDAREREWEREVLGF
KREKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYI
AFTMDKLIQSIVRQLQHLVTDDVCSRVTDMYLSESANKATGGTLSTQTSRATAEGVYQRK
AEQLMSDENCFKLMFVKSRGSVSLAMELLDTEEENSDEPAEAERWSDYVSRYLNSDSASP
ELREHLAQKPVFLPRNLRRIRKCQRGWEQLQQERMTKAPLEKSQDGNSELKMECMFKLNS
YKMVYVCKSEDYMYRHTALTRAHQSHQRVNTRLHRRFQAWLDTWAKEHVTSDMAAESHKW
LMGDAREGLLSCTTTCNPEVLHYLNVNKYRVKYRTL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatatttgcaccccagcaacagcaatcgcgt
cgtcccccagttcaaggtattgcagagagcttccagcaccgggccctcgccccggccccg
actgtgatagaggcagccgcagacaacatgcagccatccactggcatccagtattctctc
ccccagggctaccaggtgcctacaatgcctcagagcacaagtggacacggacacagcaat
actgcaccacatgtcggtccccacgcacacggtctcacagtgcagtcgcagggccctgca
gtggtccaaggtcacgttcacccacccacccccataacttcaactcaaggacagcagcag
tttcagcgactgaaggttgaagatgcgttgtcctatctggatcaagtgaagctgcagttt
gggaatcagccacaagtttataacgattttcttgatattatgaaagagttcaagtcacag
agcatagacactcctggagtcatcaaccgtgtgtcccagctcttcaagggtcacccagac
ctcatcatgggttttaacactttcctgccccctggatacaagatcgaggttcaaaccaac
gatttagtcaacgtgaccacgccgggccagatccactacatcacccctcatggtatttct
gttcagaacatccctgtaagtggagcatccagccaacctgcaagccatcaccagcaccag
agtctgccacagcctggcccacacactaccaccaccaccaccaccaccaccaccccaccc
atccccgcccaacctgctccgaataaaaccagcaagccaattcagtctccagcccataca
cccacaagccagcccaatccatccatcccatcctatgcctcaccgcgctcaccttcggtc
cagtcccacactccagtgagcagcacgccgtctgccgggccgcctctccagaacaaccag
cccgtggagttcaaccacgctataaactatgtcaacaagatcaagaaccgcttccagggt
cagccagacatctacaaagccttcttggaaatcttgcacacataccagaaggaacaaaga
aatgctaaagaggcaggaggtaactacactccagcactgactgagcaggaggtctacact
caggtggcaaggctcttcaagaaccaggaggacctgctctctgagttcggacagttcctg
cccgacgcaaacagctcagtgctgctgagcaagacggcaccagacagggcagagtcagtg
cgcaatgatcacggcgggacagtaaagagacccttactgaacaataaacaaagactgagc
cagaacggcctgccgatcagaagacctgctggagtgggacccacaccgcccgtcaagaag
aaacccaaaataatggggaaggaccatggcatgactgaagccagcaaacacagcaccagc
actgaaactatgttctttgagaaggtgaagaaggctctccggagctctgaggcctatgac
aactttctgcgctgtctgcacatcttcaatcaggaagtcatttctcgtgctgagctggtc
cagttagtcatcccatttcttggaaaattcccagagctttttacttggtttaaaaacttc
ctgggctaccgagagtttagtcacggggagtcgagccatgcagagagtttacccaaggag
cgtgcaacggagggcatcgccatggagattgactacgcttcctgcaagaggcttggatcc
agctatagagcactgcccaagagctaccagcagcccaagtgcacaggaaggacgccgctg
tgcagagaggtcctgaacgacacgtgggtgtcgtttccatcgtggtctgaggattctaca
tttgtgagctccaagaagactcagtatgaggagcacatttacagatgtgaggatgagcgc
tttgagctggatgttgtgttggaaaccaaccttgccacgatacgagtcctggagacggtg
cagcggaggctttcacggatgtcagctgaggagcagctgcgcttcaagctggacaacacc
atgggtggctcctcagaggtcattcaccgcaaagctatccagaggatatatggagacaag
gcccacgacatcattgacgggctcaagaggaacccggctgtgtctgtccccatagtgctg
aaaagattaaaaatgaaggaggaggagtggagagaagctcagagaggattcaacaaaatc
tggcgggagcagaatgaaaagtattacctgaagtcactcgaccaccaaggcatcaacttc
aagcagaatgacaccaaagtgctgcgttcaaagaccttgctcaatgaaattgagttgcta
tatgatgatcgccaggagcgagcgtccgaggaaactgccacaccgccacccagcggcccg
cacatgaccctgacctatgatgacagccagatcctggaagatgctgctgccctcatcatc
caccatgtcaaaagacaggtgggcatccagaaagaagacaagtacaagatcaaacagatc
atccaccacttcatccctgacctgctgtttgcacggcgaggcgagctctccgatgtagag
gaggaggaagaagaggaggaagaggacgtggagatggatcaagacggccccaagaagcac
aacggcctgccaggcagcagcccaacgaagtccaagctcctcttcagcaacacggcagct
cagaagctgcggggcacagacgatgcctataacctgttcttcgtgaacaactactggtat
atcttccttcgtcttcaccacatcctctgttctcgtttactgcggatctacgggcaagcg
gagaagcagatagaggaggatgctcgtgagcgagagtgggaaagagaagttttggggttc
aaaagggagaaaaatgaaaatccagcaatccaactgaagatgaaggagccaatggatgtt
gacgttgaggactattactccgtgtttctggaaatggtgcgcaaccttctggatggaaac
atggagccggctcagtacgaggattccctgagggaaatgtttactatccacgcctacatt
gccttcaccatggacaaactcatccagagcatcgtccggcagctccagcacctcgtcact
gatgatgtatgttcacgtgtgacggacatgtacctgagcgaaagtgccaacaaagccacg
ggaggcacgttgtccacgcagacatccagggccacagcagagggcgtctaccagcgcaag
gccgagcagcttatgtcagatgagaactgcttcaagttgatgttcgtgaagagccgagga
tctgtcagtctggccatggagctgctggacacagaggaggagaactctgatgagccagca
gaggcagagaggtggtcagactacgtgagcagatacctgaactcagattctgcatctcca
gagctgcgtgaacatctggcccagaagccggtgttccttcccaggaatttgagacggata
aggaagtgccagagaggatgggagcagctgcaacaggagagaatgaccaaggccccgttg
gagaagtcgcaggacggaaacagtgagctgaagatggagtgcatgttcaagctcaactcc
tacaagatggtctacgtctgcaagtcagaagactacatgtacaggcacacggcactgaca
cgggctcatcagtcccaccagcgggtcaacacacgtctgcacagacgcttccaggcctgg
ctggacacctgggctaaagagcacgtgaccagcgacatggctgctgagagccacaagtgg
ctgatgggagatgcacgagaaggcctgttgtcctgcaccaccacttgcaacccggaggtc
ctccattatctcaacgtaaacaagtaccgggtgaagtacagaacactgtag
DBGET
integrated database retrieval system
