Seriola dumerili (greater amberjack): 111225167
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Entry
111225167 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdu03032
]
111225167
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111225167
DNA replication proteins [BR:
sdu03032
]
Eukaryotic type
DNA Topoisomerases
111225167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
111225167
NCBI-ProteinID:
XP_022605581
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MXEMGREKDAKGEGKAKHKATKLKRLSDHASAGAGGDTLMNSAKPTKSTEKADNGKSKNK
VKTPKTETLESANSPSKLVKQEPEDEDFTVKKKGLKRKRIKDEPMEGPSLSTATPTSKKK
NKQHGQEDKTDGEAQKKKSTKRTEKLVKKEEEEHSASKKPKRTKEEIEEARQMKIKKKEE
EEQNRWRWWEEEKYEDGVKWKFLEHKGPYFPPDYQSLPDNVHFYYDGKKVKLSLAAEEVA
LFFAQMLDHEYTTKKVFRENFFKDWRKEMTHEEMSLIKDLDKCNFGDIHAMHKAKVEARK
NMTKEEKQVLKEANQKIVDEYGYCLLDHHKERIGNFKIEPPGLFRGRGEHPKQGMLKKRI
QPEDVIINCSKESCVPVPPAGHHWKEVRHDNTVTWLASWTENIQGSIKYIMLNANSKLKG
EKDWEKYEVARKLKTCVDDIRNQYLQDLKSKEMGTRQRAVALYFIDKLALRAGNEKEEGE
TADTVGCCSLRVEHITLHEQLEGNECVVEFDFLGKDSIRYYNKVPVIRKVFKNLKLFLEN
KQPGDDLFDRLNTSMLNKHLSSLMLGLTAKVFRTYNASITLQQQLKELTNKSDNVAEKLL
SYNRANRAVAILCNHQRAPPKTFDQSMANLQAKIDGRKEQLALAKTELKQAKKEAKAKGS
PDPKLQTLVERKKAAVKRCEEQLLKMEVQATDREENKQIALGTSKLNYLDPRISVAWCKN
TEVPVEKIYNKSQRDKFAWAIDMTEADFEF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtgagagatgggaagagagaaggacgctaaaggagaagggaaggccaagcacaaagca
acgaaactgaaaaggctgagtgatcatgcaagcgccggtgctgggggagatacgctcatg
aacagcgcaaagccaactaaatctacagagaaagctgataatggaaagtctaaaaacaag
gtcaagacacctaagacagagaccctggagtcagccaacagtcccagcaagttggtgaaa
caggagccagaggatgaggactttactgtgaagaagaaggggttgaaaaggaaaagaatt
aaagatgagcccatggaaggcccttcactttccactgccacacctacctctaagaaaaaa
aacaagcaacatgggcaggaagacaaaactgatggagaagcgcagaaaaagaagtcaacg
aagagaacagaaaagctggtaaagaaagaggaagaagagcattcagcctcaaaaaaacct
aagaggacaaaggaggagattgaggaggcaagacagatgaagatcaaaaagaaggaggag
gaggagcagaatcgctggcgatggtgggaagaagaaaagtatgaagatggggtgaaatgg
aagttcctggaacacaaaggaccctacttccctcctgactaccagtctctacctgacaac
gttcacttttactacgatggtaagaaggtgaagctgagcctggcagctgaggaggtggcg
ctgttctttgcccagatgttggaccacgagtacaccaccaaaaaggtcttcagggagaac
ttctttaaagattggaggaaggaaatgacccatgaggagatgtcactgattaaagatctt
gacaaatgcaactttggagacattcatgccatgcataaagccaaggtggaggccaggaaa
aacatgaccaaggaggagaaacaggttttgaaagaagctaatcagaagatagtggatgag
tatggctactgtttgctggaccaccacaaagaacgtataggcaactttaagattgagcct
ccagggctgttcaggggtagaggcgaacaccccaaacagggaatgctgaagaaaaggatc
cagccagaggatgtcatcatcaactgcagcaaagaatcatgtgtcccggtgccgcctgct
ggtcaccactggaaggaggtacgacatgacaacacagtgacgtggctggccagctggact
gaaaacatccagggctccattaaatacatcatgctcaatgccaactcaaaactcaaggga
gagaaggactgggagaaatatgaggttgctcggaaactgaagacatgtgtggacgacatc
cgtaaccagtacctccaggatctcaagtctaaagagatgggcactcgtcagagagctgtg
gccctctacttcatagacaagctggcgctgagagctggtaatgagaaggaggaaggagag
acggcagacacagtgggctgctgctcgctacgagtcgaacacatcactctgcatgagcaa
ctggaaggcaacgagtgtgtggtggagttcgacttcctgggtaaagactccattcgctac
tacaacaaggtccctgtcatcaggaaggtttttaagaatcttaaactgttcctcgagaac
aagcaacctggagatgacctctttgaccgccttaatacaagcatgctgaacaagcatttg
agttccctaatgctaggtcttactgcgaaggtcttcaggacatataacgcctccatcacc
ctgcagcagcagctcaaagagctcacaaacaagtctgacaatgtggcagagaaattgctg
tcctacaacagggctaacagagcagttgctattctctgcaaccaccagcgggcgccgcca
aagacatttgatcagtctatggctaatctacaggccaagattgatggtagaaaggaacag
cttgccctagctaagacggagctgaaacaggccaagaaggaggccaaggccaaaggcagc
ccagacccaaagctgcagacgctggtggagcggaagaaggcagcagtgaagcgctgtgag
gagcagctgctgaagatggaggtccaggcgactgacagagaagagaacaaacaaattgcg
ctgggtacctcaaagctcaactatctggacccacgcataagcgtggcttggtgtaaaaac
acagaggtacctgtagaaaaaatctacaataagagccaaagagacaagtttgcctgggcc
attgacatgacagaggctgactttgagttctaa
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