Seriola dumerili (greater amberjack): 111225183 Help Entry 111225183         CDS       T05606                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu03040   Spliceosome Brite KEGG Orthology (KO) [BR:sdu00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111225183 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sdu03021]     111225183 (sf3b3)    03041 Spliceosome [BR:sdu03041]     111225183 (sf3b3)    03036 Chromosome and associated proteins [BR:sdu03036]     111225183 (sf3b3) Transcription machinery [BR:sdu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      111225183 (sf3b3) Spliceosome [BR:sdu03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     111225183 (sf3b3)  Complex B     111225183 (sf3b3)  Complex C    U2 SnRNP specific factors     111225183 (sf3b3) Chromosome and associated proteins [BR:sdu03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      111225183 (sf3b3)     TFTC complex      111225183 (sf3b3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML Motif Other DBs NCBI-GeneID:  111225183 NCBI-ProteinID:  XP_022605610 UniProt:  A0A3B4VFX3 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQCTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGSTLDQVQLEQNEAAFSVAVCRFTNTG DDWYVLVGVARDMILNPRSVAGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYRRNENQ LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctctacaacatcacgctgcagcgtgccactggcatcacccatgccatccatgga aacttttcaggaaccaagatgcaggagattgttgtttctaggggaaagatcttggaatta ttgcggccagatgccaacacaggaaaggtgcacactctgctcacagtggaggtgtttggc attatcaggtccctgatggcattcagactcactggaggaaccaaagattacatagttgtg ggaagtgacagcggccgtattgtcatcctggaatatcatccatcgaaaaacatgtttgag aagattcaccaggaaacgtttggaaagagcggctgtcggcgcattgttcctggacagttc ctggctgtcgacccaaaaggcagagctgttatgataggagcaatcgagaaacagaagctg gtttatattctgaacagagacgcagctgcgagactgaccatctcctctccactggaagcc cataaagcgaacacactggtgtaccatgttgtcggagtcgatgttggctttgaaaatccc atgtttgcttgcttagaaatggactatgaggaagctgacaatgacccaacaggagaagct gctgcaaacacgcaacagacgctcactttttacgagctggaccttggcttgaatcatgtt gtccgcaagtacagcgaggctttggaagagcatggaaacttcctcatcactgtccctggt ggttcagatgggcccagtggagttctgatctgctctgaaaactacatcacttacaagaac tttggagaccagcctgacatccgctgtcccatcccgcgacgcaggaatgatctggatgac ccagagcgtggcatgatatttgtctgctcagccacccacaagaccaagtccatgttcttc ttcctggcacagactgagcagggagacatctttaaggttaccctggagacagatgaagaa atggtcacagaaatcaggctgaagtattttgacacgatccctgtggcaacagccatgtgt gtcctgaagaccggcttcctgtttgtgtcgtcagagtttggaaaccattacctctaccag atcgctcacttaggtgacgacgacgacgaacctgagttctcatctgcaatgccattggaa gagggagacaccttctttttccagccccgccccctcaaaaacctagtgctggtggatgag caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagacaca cctcagctgtatgtggcctgtggacgaggtccaaggtcaaccctaagggtccttcggcac ggactcgaggtttcagagatggctgtgtctgagctgcccggtaaccccaacgctgtgtgg acagtacgcagacacgtggaagatgagtttgacgcctacatcatcgtgtctttcgtcaac gctactctggttctgtccatcggggagactgtagaggaagtgacagattctggatttctg ggaacaacgcccactctctcctgctccctgctgggtgaagatgccttggtgcaagtgtac ccagacggcatccgccacatcagagcagacaagcgtgtgaacgagtggaagactcctggg aaaaaaacaattgtccgctgcgctgtgaaccagcggcaggtggtgatcgccctcactgga ggagagctggtctactttgagatggacccgtccggccagctgaatgagtacacagagcgg aaagagatgtctgcagatgtggtttgcatgagcctggctaacgtcccacctggtgagcaa cgctctcgattcctggctgttggactggttgacaacactgttcgaatcatctccctggac ccttcggactgcctgcagccgctgagtatgcaggccctgccagcccagccagagagtctg tgtatcgtagagatgggaggcgtcgagaaacaggatgaacttggagaaaagggaaccatc ggattcctctacctcaacattggacttcagaatggtgtgctgctcaggactgtgttggac ccagtaaccggtgacctgtcggatacaagaacacgctacttggggtcacgacctgtcaaa ctcttcagagtcaggatgcagggacaggaagctgtgctggcaatgtccagtcgttcctgg ctcagctactcgtaccagtctcgcttccatctgacccctctgtcatatgagactctggag tacgcctctggctttgcctctgagcaatgcccagaaggtatagtggccatctccaccaac acactgagaatcttggctttggagaagttaggggctgtcttcaaccaggtggcctttcct ctgcagtgcacccccagaaaatttgttatccacccggagaccaacaacctcattttgatt gagactgaccacaatgcctacaccgaggcgaccaaagctcagcgaaagcagcagatggct gaggagatggtggaggctgctggcgaggatgaaagagaactggccgctgagatggccgct gccttcctcaacgagaatctcccagaagccatctttggtgcacctaaagctggagccggg cagtgggcctcactggtgcgtctggtcaaccccatacagggttccacattggaccaggtg caactggaacagaacgaagctgcattcagtgtggccgtgtgtcgtttcaccaacacagga gacgattggtatgttctggttggtgttgccagagacatgattctcaaccccagatcagtg gctggtggctttatctacacctataggctgattggtggaggggagaagctggagtttgtt cacaagaccccggtggaggacgtgcctttggccattgctccattccagggacgagtcctg gtgggggttgggaaactgctgagaatctatgacctgggcaaaaagaagctgcttcgcaaa tgtgaaaataagcacgtacccaacctggtgactggtatccataccatcggccagcgtgta attgtgacagacgtccaggagagtctgttctgggttcgttatcgacgtaacgagaaccag ctcatcatctttgctgacgacacatatccacgctgggtgacaacggcctgtctgctcgac tatgacaccatggcctccgctgacaagttcgggaacatcagcattgtgcgtcttcccccc aacaccagtgatgatgtggatgaagaccccacagggaacaaagctttatgggacagaggc ctgcttaatggagcgtcacagaaggctgaggtcataatgaactaccacgtaggagagaca gtgttatctctccagaaaaccactctgattcctggaggttcagagtccttggtttacacc acactgtctggaggcatcggcatactggtcccattcacctcacatgaggatcatgacttt ttccagcatttagagatgcacatgcgctctgaattccctccactgtgcggtagagaccat ctcagctttagatcctactacttcccggttaagaatgtgattgatggagatctgtgcgag cagtttaacagtatggaccctcacaagcagaagagtgtggcagaagagctggacagaacg ccaccagaggtctctaagaaactggaggatattcgcactcgctacgctttctaa

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