Seriola dumerili (greater amberjack): 111225329
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Entry
111225329 CDS
T05606
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111225329 (katnb1)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
111225329 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
PROPPIN
RMC1_N
Beta-prop_LRRK2
Beta-prop_IFT140_2nd
WD_LRWD1
WDR54
Ge1_WD40
VPS8_N
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_2nd
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
111225329
NCBI-ProteinID:
XP_022605847
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MAAASTTKISWRLQEFEAHSSSVSCLALGKSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKNPVECVQFNMSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKANITSLGFHPFGDFL
ASSSLDTNIKLWDVRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTVKLWDLTQGK
TITEFRSHTAAVNIVQFHPNEYLLASGSCDRTIKLWDLEKFTMIGSLEGDTTPVRCIFFS
PDGSCVYSGATDSLRVFGWEPDRCFDVVPVGWGKVSDLAVCNQQLIGVSHQLSSVSSYVV
DLKRVKKSGGSVIQGIIQDNQPLSEPKDPKGVALRRNYERPTTTCSSQRVKQRSDADRRS
PEGERRSPSEDEADEKLSSAEIHNAEDYKEIFQPKNAISRTPPKISEPFPAPPEDETILA
ISHQLKDMVSPFPDKQQAPPQASSTPVQRVEPTVVSCAKRPAPSAVGPSSSDPPTFRPPP
PQPPVTTAKSKPQPKIILSTRNEPIGLNVADFLPSSPNNRPGALSDEEALSQIKKGHDTM
CVMLSSRHKNLETVRAVWAREDIKSALDTAVSMNDLSIVVDILNIINLQPSLWKLDLCTS
ILPQIDKLLQSKYESYMQTGCTSLKLIMKHFWMLISDTLKASPCVGVDITREERHQKCRA
CCKQLKNLSNIVKNKAAQVGRHGSAFKELQLLMAPLDDSL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccagcaccaccaagatctcatggcgactgcaggagttcgaggctcactcc
agcagcgtttcctgtttggctctggggaaaagctccggccgcctgctggccacaggagga
gaagactgcagggtgaacatctgggctgtgagcaaggccaactgcatcatgagtctgact
ggtcacaagaacccagtggagtgtgtccagttcaacatgtcagaggagcaggttgtcgct
ggttcacagtctggatcgatacgagtttgggacctggaggccgccaagattttaaggact
ctgatgggacacaaagccaacatcaccagtctgggcttccatccgtttggagacttcctg
gcctccagttccctggacacaaacatcaagctgtgggacgtgcggaggaaaggatatgtg
ttcaggtataagggtcacacccaggcggtgaggagtctggccttcagtccagatgggaag
tggttggcttcagcaagtgacgactgcaccgtcaagctgtgggacctgactcaggggaag
accatcaccgagttcagatctcacactgcagctgtcaacatcgtccagttccaccccaac
gagtacctgctggcatcaggcagctgcgacaggaccatcaaactctgggatctggagaaa
ttcacaatgatcggctcgttggagggagacacgactccagtcaggtgtatattttttagt
ccggacggcagctgtgtgtacagcggggccacagactctctgcgggtcttcggctgggag
cccgaccgctgcttcgacgtggtgccggtgggctgggggaaagtctctgacctggcagtg
tgcaaccagcagctgatcggtgtgtctcaccagctctccagcgtttcgtcctacgtcgtc
gacctgaagcgggtgaagaagagcggcggctccgtgatccagggaatcatccaggacaac
cagccgctctcagagcccaaggatcctaaaggagtcgcactgaggaggaactacgagaga
cccacaaccacctgcagctcacagagggtgaagcagaggtcagacgctgataggcggagc
cccgaaggtgagaggcggagccccagtgaggatgaggcagatgagaaactgtcgtcagct
gagatccacaacgctgaagactacaaggagatctttcaacccaagaacgccatctctcga
actcctcccaagatctccgagcctttccctgctcctccagaagacgagaccatattagcc
atcagccatcagctgaaggacatggtttctccgtttcctgacaagcagcaggctcctcct
caggcctcttctactccggtccagagggtggagcctacagtggtctcctgtgcgaagcgt
cccgccccctcagctgtgggcccttcgtcctccgacccccccacattccgcccccctcct
cctcagccccccgtcaccacggccaagtctaaacctcaacctaaaatcatcctgagcacc
aggaacgagcccatcggactgaacgtggccgacttcctgccctcttcccccaacaacaga
cctggagctctgagcgacgaggaggcgctgtctcagatcaagaagggtcacgacaccatg
tgtgtgatgctgagcagccgacacaagaacctggagacggtccgagccgtgtgggccaga
gaggacatcaagagtgccttggacacggctgtctccatgaacgacctgtccattgtagtg
gacatcctcaacatcatcaacctgcagccgtcgctatggaaactggacctttgtacgtcg
atccttcctcagatcgacaaactgctgcagagtaaatacgagagctacatgcagaccggc
tgtacgtctctgaagctcatcatgaaacatttctggatgttgatctcagacacgttaaag
gcgtcgccgtgtgtcggagtcgacatcacacgagaggagcgacaccagaagtgcagagcg
tgctgtaagcagctgaagaacctcagcaacatcgtgaagaacaaggcggcgcaggtcggt
cgccacggcagcgccttcaaagagctgcagctgctcatggctccgctcgacgactcactc
tga
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