Seriola dumerili (greater amberjack): 111225368
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Entry
111225368 CDS
T05606
Symbol
capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111225368 (capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111225368 (capn3)
Enzymes [BR:
sdu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
111225368 (capn3)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C2: calpain family
111225368 (capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
111225368
NCBI-ProteinID:
XP_022605906
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPLRFNGQDFCFQRQECLQTKNLFEDESFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKPSQHKDNKVRLVRLRNPWGQVE
WNGPWSDNSKEWTSLSKSEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVGCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPREMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLTPGEYVIIPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGEVSTGRTVSLWFLSQDMEITANELKNVLNRVITKHKDLNTEGFSL
ESCRSMIALMDMDGTGRLNLQEFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDA
GFRLNNQLYDIITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTIRLSVLEW
LQLTMYA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccgtctggctttttctgcgaccggttgatccgggaacgagagaggaga
gacggggaagggtccctgaacaagccgctccgcttcaacggccaggacttctgcttccag
aggcaggagtgccttcagaccaagaacctgtttgaggatgagtctttcccggccactgtg
gagtctctgggcttcaaggagctcggacacaagtccaacaaagtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgagaatcctcagttcattgttggaggggccagtaggaca
gacatctgccagggagatctcggtgactgctggctgctggctgccatcgcctgtctcacc
ctgaatgagaagcttctgtaccgtgttgttccccaggagcaaagcttctcagagggctat
gccggcatcttccacttccagttctggcgctatggcgactgggtcgatgtcgtcatcgac
gaccgcatcccgaccttcaacaaccagctggtcttcaccaagtccgccgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagctgcacggctcctacgaggccctg
aagggcggaaacaccacggaggccatggaggatttcaccggcggagtcactgagttctac
gagatgaaggaagctcccaaagagctctacaagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccatcgactccctggttcccgctcgcttcgagactcgtactgtg
acggggcttgtgaagggtcacgcttactctgtgacggcggtggaggagtgtaaaccgtct
cagcacaaggacaataaagttcgtctggtgcgtctcaggaacccgtggggtcaagtggag
tggaacggcccctggagtgacaactcgaaggagtggacctccctgtctaagtctgagaaa
gagaagctgcagcaccagagcgccgaggacggagagttctggatgtcgttcgaggatttc
aagaagaactacaccaagatcgagatctgcaacctcacccctgacgcgctggaggacgat
aagatccacaagtggacggtgtctgtgaacgagggccgctgggtgagaggctgctccgcc
ggaggctgcaggaactacccagacactttctggaccaaccctcagtaccgcctccgtttg
ctggaggaggacgatgaccccgaggacaacgaggtgggctgcaccttcgtggtggctctg
atgcagaagaaccggcggaaagagcgcaagatgggagccaacctcttcaccatcggattc
gctatttacgaggtgccgagggagatgcacgggaacaagcagcacatgcagaaggacttc
ttcctgttcaactcctccaaggcgcgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgtttccgcctgacccccggggagtacgtcatcatcccctccacgtacgagccgcac
caggagggggagttcatcctgcgagtcttctctgaaaagaagaacacctcagaggagata
gagaacaggatcgaggctgaccatccagtgccggcgccggcctcggcgggggaagagagc
gaggaggatcagcagttccgcactatttttcaggagatagctggagaggtgagtacaggg
aggacagtctccctctggtttctctctcaggacatggaaatcacagccaacgaactgaaa
aacgttctgaacagagtgatcaccaaacataaggacctgaacacagagggcttcagtctg
gagagctgcaggagcatgattgctctgatggacatggatgggacaggtagactcaatctc
caggagttcagacacctgtggaataagatcaaacagtggcagggaatctttaaacactat
aacgctgaccagtctgggagcatcaatagctacgagatgaggaatgctgtcaacgacgca
ggcttccgtctcaacaaccagctgtacgacatcatcaccatgcgctacgcgaacgagaac
atgaacatcgacttcgacagcttcatcagctgtctggtccgactcgaagccatgttcagg
gcgttccaggccttcgatcaggatggagatggaacaatcagactcagtgtcctggagtgg
ctccagttgaccatgtacgcctag
DBGET
integrated database retrieval system